Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCTTGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTGTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGGCCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCTCCATCT
mRNA sequence
ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCTTGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTGTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGGCCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCTCCATCT
Coding sequence (CDS)
ATGAGTTGGATGGTGGGGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACGATGACCTCCTTGTCTCTCCCGCCGATGCCGCTGCTCGCCTTTTTCGGTGTCGTCGTCCTTCTGCTGTCGTTGCAGACGAAAACCGTGTTCGACTTCAAGTTGTTCCTTTTTGCTGTGATATTATTGCTGATCTTTGTTGTAAATTCCATGGCCGTGTATGGTACGGTTGTTGGGCCTGCTTCAGTGAGAACTACGACCAGGTCGGTTCGGGAGGCCGAAAAGGCCTCGCCTTGGGGCGTGGCGGTGTTGCTGTTTCTGCTGCTGATATTGCTATGGAACCGCCCTTACTTCCGCTCCAAGTGGTCGCCTCCATCT
Protein sequence
MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQTKTVFDFKLFLFAVILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRSKWSPPS
Homology
BLAST of MS021845 vs. NCBI nr
Match:
KGN60038.1 (hypothetical protein Csa_001668 [Cucumis sativus])
HSP 1 Score: 182.2 bits (461), Expect = 2.8e-42
Identity = 95/126 (75.40%), Postives = 107/126 (84.92%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M+S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
L+IFV NS+AV GT VG AS+RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFLMIFVANSVAVSGT-VGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. NCBI nr
Match:
KAA0063287.1 (hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa])
HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 93/126 (73.81%), Postives = 105/126 (83.33%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
L+IF NS+AV GT VG A++RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFLIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. NCBI nr
Match:
TYK31488.1 (hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa])
HSP 1 Score: 177.2 bits (448), Expect = 9.0e-41
Identity = 92/126 (73.02%), Postives = 104/126 (82.54%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
+IF NS+AV GT VG A++RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFFIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. NCBI nr
Match:
KAG6608597.1 (hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 144.8 bits (364), Expect = 4.9e-31
Identity = 80/115 (69.57%), Postives = 91/115 (79.13%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAV 60
MSW ER EWKYGWAERTM S+SLPPMPLLAF GVV+LLLSLQ++ + FDFKLFL A+
Sbjct: 1 MSWAEEERVQEWKYGWAERTMASMSLPPMPLLAFLGVVLLLLSLQSQDMAFDFKLFLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNR 115
LLIF+ NS+ V G+V A +RT RS +EAEK SPWG AVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVAGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of MS021845 vs. NCBI nr
Match:
KAG7037914.1 (hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30
Identity = 79/115 (68.70%), Postives = 91/115 (79.13%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAV 60
MSW ER PEWKYGWAERT+ S+S PPMPLLAF GVV+LLLSLQ++ + FDFKLFL A+
Sbjct: 1 MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMAFDFKLFLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNR 115
LLIF+ NS+ V G+V A +RT RS +EAEK SPWG AVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVSGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of MS021845 vs. ExPASy TrEMBL
Match:
A0A0A0LE80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 95/126 (75.40%), Postives = 107/126 (84.92%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M+S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMSSMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
L+IFV NS+AV GT VG AS+RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFLMIFVANSVAVSGT-VGSASMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. ExPASy TrEMBL
Match:
A0A5A7V8G0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001100 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 93/126 (73.81%), Postives = 105/126 (83.33%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
L+IF NS+AV GT VG A++RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFLIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. ExPASy TrEMBL
Match:
A0A5D3E6P1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008040 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 92/126 (73.02%), Postives = 104/126 (82.54%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT-KTVFDFKLFLFAV 60
MSW+V ERGPEWKYGW ER M S+SLPPMPLLAF GVVVLLLSLQ+ + V DFKL L A+
Sbjct: 1 MSWVVEERGPEWKYGWTERKMASMSLPPMPLLAFLGVVVLLLSLQSQQMVLDFKLLLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNRPYFRS 120
+IF NS+AV GT VG A++RT +RS +EAE+ SPWG AVLLFLLLILLWNRPYFRS
Sbjct: 61 PFFIIFFANSVAVSGT-VGSAAMRTKSRSAQEAERTSPWGAAVLLFLLLILLWNRPYFRS 120
Query: 121 KWSPPS 126
KWSPPS
Sbjct: 121 KWSPPS 125
BLAST of MS021845 vs. ExPASy TrEMBL
Match:
A0A6J1FL09 (uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC111446211 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30
Identity = 78/115 (67.83%), Postives = 90/115 (78.26%), Query Frame = 0
Query: 1 MSWMVGERGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQTKTV-FDFKLFLFAV 60
MSW ER PEWKYGWAERT+ S+S PPMPLLAF GVV+LLLSLQ++ + DFKLFL A+
Sbjct: 1 MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLAL 60
Query: 61 ILLLIFVVNSMAVYGTVVGPASVRTTTRSVREAEKASPWGVAVLLFLLLILLWNR 115
LLIF+ NS+ V G+V A +RT RS +EAEK SPWG AVLLFLLLILLWNR
Sbjct: 61 PFLLIFIANSLLVSGSVASTA-MRTKNRSAQEAEKTSPWGAAVLLFLLLILLWNR 114
BLAST of MS021845 vs. ExPASy TrEMBL
Match:
A0A5A7VAG3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004990 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 4.7e-19
Identity = 59/135 (43.70%), Postives = 82/135 (60.74%), Query Frame = 0
Query: 1 MSWMVGE-RGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT---------KTVF 60
M W++ E RGP WK GWAE+ ++S++ PP PLLA G++V+LLS+ + KT
Sbjct: 1 MGWLIRERRGPAWKQGWAEQALSSITPPPRPLLAILGILVILLSVSSYSSYRSQVKKTRI 60
Query: 61 DFKLFLFAVILLLIFVVNSMAVYG--TVVGPASVRTTTRSVREAEKASPWGVAVLLFLLL 120
+FKLF + L+ +FV NS+ YG ++ P + A ASPWG AVLL +LL
Sbjct: 61 NFKLFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVTEGAASASPWGAAVLLVVLL 120
Query: 121 ILLWNRPYFRSKWSP 124
+LL +PYF SKW P
Sbjct: 121 VLLSYQPYFHSKWFP 135
BLAST of MS021845 vs. TAIR 10
Match:
AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 48/135 (35.56%), Postives = 70/135 (51.85%), Query Frame = 0
Query: 1 MSWMVGE-RGPEWKYGWAERTMTSLSLPPMPLLAFFGVVVLLLSLQT---------KTVF 60
M W + E RG WK GW E T+ + S PP+ LLA ++ LLL L + KT
Sbjct: 1 MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60
Query: 61 DFKLFLFAVILLLIFVVNSMAVYGTVV--GPASVRTTTRSVREAEKASPWGVAVLLFLLL 120
+ KLF+ + +L +FV+ S++ ++ SVR E PWGV ++L LLL
Sbjct: 61 NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120
Query: 121 ILLWNRPYFRSKWSP 124
+L+ + YF S W P
Sbjct: 121 LLVSKQSYFHSLWYP 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN60038.1 | 2.8e-42 | 75.40 | hypothetical protein Csa_001668 [Cucumis sativus] | [more] |
KAA0063287.1 | 3.1e-41 | 73.81 | hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa] | [more] |
TYK31488.1 | 9.0e-41 | 73.02 | hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa] | [more] |
KAG6608597.1 | 4.9e-31 | 69.57 | hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037914.1 | 1.1e-30 | 68.70 | hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LE80 | 1.3e-42 | 75.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872200 PE=4 SV=1 | [more] |
A0A5A7V8G0 | 1.5e-41 | 73.81 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E6P1 | 4.3e-41 | 73.02 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1FL09 | 2.6e-30 | 67.83 | uncharacterized protein LOC111446211 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |
A0A5A7VAG3 | 4.7e-19 | 43.70 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42146.1 | 1.7e-13 | 35.56 | unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac... | [more] |