MS021837 (gene) Bitter gourd (TR) v1

Overview


Name	MS021837
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold1: 693752 .. 694339 (-)
RNA-Seq Expression	MS021837
Synteny	MS021837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATCCATATTTTCTAGACCGACCGCCCCCTGCCGGCTACAACCAAACCAGATCACTTCCAATTTCAAACAATAACTATAACTACAATCTCGAAAATATAGCCGCCGCCGCCGGTAACAACCACGGCGGTCTCTTGCGCACGCCGCCGCGGTTCTTCTCGGCTCCGTCAATAATCCACGGCCACCAATTTCACCCCTTCATCCAACTCCAACCACCGCCTCTCCTTCCGCCGCCGATTCTACGGCCGCACCGCTCTCTCCCTTCTCAACCGGCCCGGTCCCACTCCCTCAACCCCAAGAAATCCAAATCCGCTAAGAGATCAGAGAAAAAATTTTCGCCGGCCGCGGTTGATCGGCGGGCTGCTTCTAGAACCTCCTCGACGGCGGCGGCGGCGAAGAGGGTCGTTAAAGTCGAGGAATTGGATCTGTCGGGGTGTTTGTTTGCGCTTTCTCCGCCGCCCAGCAGCTTGCCGCTGCCCAAGTTTTGTTTGAGGCCGGCGAAGCTCAATTGCAATGTGGAGGCCGCCGGAGTCGACGACGGCGCCACCACGGCGGACGATCTCCGGCGGCTTCTGCGCCTCCGT

mRNA sequence

ATGGCCGATCCATATTTTCTAGACCGACCGCCCCCTGCCGGCTACAACCAAACCAGATCACTTCCAATTTCAAACAATAACTATAACTACAATCTCGAAAATATAGCCGCCGCCGCCGGTAACAACCACGGCGGTCTCTTGCGCACGCCGCCGCGGTTCTTCTCGGCTCCGTCAATAATCCACGGCCACCAATTTCACCCCTTCATCCAACTCCAACCACCGCCTCTCCTTCCGCCGCCGATTCTACGGCCGCACCGCTCTCTCCCTTCTCAACCGGCCCGGTCCCACTCCCTCAACCCCAAGAAATCCAAATCCGCTAAGAGATCAGAGAAAAAATTTTCGCCGGCCGCGGTTGATCGGCGGGCTGCTTCTAGAACCTCCTCGACGGCGGCGGCGGCGAAGAGGGTCGTTAAAGTCGAGGAATTGGATCTGTCGGGGTGTTTGTTTGCGCTTTCTCCGCCGCCCAGCAGCTTGCCGCTGCCCAAGTTTTGTTTGAGGCCGGCGAAGCTCAATTGCAATGTGGAGGCCGCCGGAGTCGACGACGGCGCCACCACGGCGGACGATCTCCGGCGGCTTCTGCGCCTCCGT

Coding sequence (CDS)

ATGGCCGATCCATATTTTCTAGACCGACCGCCCCCTGCCGGCTACAACCAAACCAGATCACTTCCAATTTCAAACAATAACTATAACTACAATCTCGAAAATATAGCCGCCGCCGCCGGTAACAACCACGGCGGTCTCTTGCGCACGCCGCCGCGGTTCTTCTCGGCTCCGTCAATAATCCACGGCCACCAATTTCACCCCTTCATCCAACTCCAACCACCGCCTCTCCTTCCGCCGCCGATTCTACGGCCGCACCGCTCTCTCCCTTCTCAACCGGCCCGGTCCCACTCCCTCAACCCCAAGAAATCCAAATCCGCTAAGAGATCAGAGAAAAAATTTTCGCCGGCCGCGGTTGATCGGCGGGCTGCTTCTAGAACCTCCTCGACGGCGGCGGCGGCGAAGAGGGTCGTTAAAGTCGAGGAATTGGATCTGTCGGGGTGTTTGTTTGCGCTTTCTCCGCCGCCCAGCAGCTTGCCGCTGCCCAAGTTTTGTTTGAGGCCGGCGAAGCTCAATTGCAATGTGGAGGCCGCCGGAGTCGACGACGGCGCCACCACGGCGGACGATCTCCGGCGGCTTCTGCGCCTCCGT

Protein sequence

MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSIIHGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFSPAAVDRRAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVDDGATTADDLRRLLRLR

Homology

[Close]

BLAST of MS021837 vs. NCBI nr
Match: XP_022139188.1 (uncharacterized protein LOC111010153 [Momordica charantia])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFSPAAVDR 120
           HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEK FSPA VDR
Sbjct: 61  HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPAVVDR 120

Query: 121 RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD 180
           RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD
Sbjct: 121 RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD 180

Query: 181 DGATTADDLRRLLRLR 197
           DGATTADDLRRLLRLR
Sbjct: 181 DGATTADDLRRLLRLR 196

[Close]

BLAST of MS021837 vs. NCBI nr
Match: KAA0063295.1 (uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 2.3e-51
Identity = 136/204 (66.67%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   I+N   N++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ITN---NFHLENLAAVSGYSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP-----ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFS 120
           H HQ +PF Q  + PPLLPPP      LRPHRSL SQP RSHSL  KKSKS ++  +K S
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTTPSNLRPHRSLHSQP-RSHSL--KKSKSTRK--EKDS 120

Query: 121 PAAVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAK-LN 180
            A VDRR  SRT S+A AAKRVV+VEEL+ LSGC FA +SPPPSSLPLPKF +RPAK L 
Sbjct: 121 AAVVDRRIPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALK 180

Query: 181 CNVEAAGVDDGATTADDLRRLLRL 196
           CNVEAAG DDGA  ADDLRRLLRL
Sbjct: 181 CNVEAAGADDGAAAADDLRRLLRL 192

[Close]

BLAST of MS021837 vs. NCBI nr
Match: XP_008466665.1 (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncharacterized protein E5676_scaffold455G007960 [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 6.7e-51
Identity = 135/204 (66.18%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   I+N   N++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ITN---NFHLENLAAVSGYSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP-----ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFS 120
           H HQ +PF Q  + PPLLPPP      LRPHRSL SQP RSHSL  KKSKS ++  +K S
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTTPSNLRPHRSLHSQP-RSHSL--KKSKSTRK--EKDS 120

Query: 121 PAAVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAK-LN 180
              VDRR  SRT S+A AAKRVV+VEEL+ LSGC FA +SPPPSSLPLPKF +RPAK L 
Sbjct: 121 ATVVDRRIPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALK 180

Query: 181 CNVEAAGVDDGATTADDLRRLLRL 196
           CNVEAAG DDGA  ADDLRRLLRL
Sbjct: 181 CNVEAAGADDGAAAADDLRRLLRL 192

[Close]

BLAST of MS021837 vs. NCBI nr
Match: KGN60046.1 (hypothetical protein Csa_001363 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-50
Identity = 136/206 (66.02%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   ISN   +++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ISN---HFHLENLAAVSGFSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP------ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKF 120
           H HQ +PF Q  + PPLLPPP       +RPHRSLPSQP RSHSL  KKSKS ++  +K 
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQP-RSHSL--KKSKSTRK--EKD 120

Query: 121 SPAAVDRRAASRT-SSTAAAAKRVVKVEELD-LSGCLF-ALSPPPSSLPLPKFCLRPAK- 180
           S A VDRR  SRT SS  A AKRVV+VEEL+ LSGC F  +SPPPSSLPLPKF +RPAK 
Sbjct: 121 SAAVVDRRIPSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKA 180

Query: 181 LNCNVEAAGVDDGATTADDLRRLLRL 196
           LNCNVEA GVDDGA  ADDLRRLLRL
Sbjct: 181 LNCNVEAVGVDDGAAAADDLRRLLRL 194

[Close]

BLAST of MS021837 vs. NCBI nr
Match: KAG6608604.1 (hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037922.1 hypothetical protein SDJN02_01553, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.0 bits (484), Expect = 9.4e-45
Identity = 122/179 (68.16%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR   +GY  TR   +SN    ++L+N AA  G +HGGLL+TPPRFFS PS I
Sbjct: 1   MADPYFLDRTSTSGYKPTR---VSN---EFHLQN-AAVYGGSHGGLLQTPPRFFSVPS-I 60

Query: 61  HGHQFHPFI---QLQPPPLL-PPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFSPA 120
           H HQ  PFI   Q QPPPLL PPPILRPHR+L SQP  SHSL  KKSKS KR   K S A
Sbjct: 61  HSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSL--KKSKSIKRD--KDSAA 120

Query: 121 AVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCN 174
            VDRR  SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Sbjct: 121 VVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167

[Close]

BLAST of MS021837 vs. ExPASy TrEMBL
Match: A0A6J1CF43 (uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010153 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.3e-103
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFSPAAVDR 120
           HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEK FSPA VDR
Sbjct: 61  HGHQFHPFIQLQPPPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPAVVDR 120

Query: 121 RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD 180
           RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD
Sbjct: 121 RAASRTSSTAAAAKRVVKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVD 180

Query: 181 DGATTADDLRRLLRLR 197
           DGATTADDLRRLLRLR
Sbjct: 181 DGATTADDLRRLLRLR 196

[Close]

BLAST of MS021837 vs. ExPASy TrEMBL
Match: A0A5A7VBL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001180 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 136/204 (66.67%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   I+N   N++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ITN---NFHLENLAAVSGYSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP-----ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFS 120
           H HQ +PF Q  + PPLLPPP      LRPHRSL SQP RSHSL  KKSKS ++  +K S
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTTPSNLRPHRSLHSQP-RSHSL--KKSKSTRK--EKDS 120

Query: 121 PAAVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAK-LN 180
            A VDRR  SRT S+A AAKRVV+VEEL+ LSGC FA +SPPPSSLPLPKF +RPAK L 
Sbjct: 121 AAVVDRRIPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALK 180

Query: 181 CNVEAAGVDDGATTADDLRRLLRL 196
           CNVEAAG DDGA  ADDLRRLLRL
Sbjct: 181 CNVEAAGADDGAAAADDLRRLLRL 192

[Close]

BLAST of MS021837 vs. ExPASy TrEMBL
Match: A0A5D3E771 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007960 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.3e-51
Identity = 135/204 (66.18%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   I+N   N++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ITN---NFHLENLAAVSGYSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP-----ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFS 120
           H HQ +PF Q  + PPLLPPP      LRPHRSL SQP RSHSL  KKSKS ++  +K S
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTTPSNLRPHRSLHSQP-RSHSL--KKSKSTRK--EKDS 120

Query: 121 PAAVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAK-LN 180
              VDRR  SRT S+A AAKRVV+VEEL+ LSGC FA +SPPPSSLPLPKF +RPAK L 
Sbjct: 121 ATVVDRRIPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALK 180

Query: 181 CNVEAAGVDDGATTADDLRRLLRL 196
           CNVEAAG DDGA  ADDLRRLLRL
Sbjct: 181 CNVEAAGADDGAAAADDLRRLLRL 192

[Close]

BLAST of MS021837 vs. ExPASy TrEMBL
Match: A0A1S3CRS4 (uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.3e-51
Identity = 135/204 (66.18%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   I+N   N++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ITN---NFHLENLAAVSGYSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP-----ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKFS 120
           H HQ +PF Q  + PPLLPPP      LRPHRSL SQP RSHSL  KKSKS ++  +K S
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTTPSNLRPHRSLHSQP-RSHSL--KKSKSTRK--EKDS 120

Query: 121 PAAVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAK-LN 180
              VDRR  SRT S+A AAKRVV+VEEL+ LSGC FA +SPPPSSLPLPKF +RPAK L 
Sbjct: 121 ATVVDRRIPSRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALK 180

Query: 181 CNVEAAGVDDGATTADDLRRLLRL 196
           CNVEAAG DDGA  ADDLRRLLRL
Sbjct: 181 CNVEAAGADDGAAAADDLRRLLRL 192

[Close]

BLAST of MS021837 vs. ExPASy TrEMBL
Match: A0A0A0LJ69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.6e-51
Identity = 136/206 (66.02%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
           MADPYFLDR P  G+N TR   ISN   +++LEN+AA +G +HGGLL+TPPRF SAPS  
Sbjct: 1   MADPYFLDRSPSTGHNLTR---ISN---HFHLENLAAVSGFSHGGLLQTPPRFLSAPS-F 60

Query: 61  HGHQFHPFIQL-QPPPLLPPP------ILRPHRSLPSQPARSHSLNPKKSKSAKRSEKKF 120
           H HQ +PF Q  + PPLLPPP       +RPHRSLPSQP RSHSL  KKSKS ++  +K 
Sbjct: 61  HTHQSYPFFQQNKSPPLLPPPPTPTQSNIRPHRSLPSQP-RSHSL--KKSKSTRK--EKD 120

Query: 121 SPAAVDRRAASRT-SSTAAAAKRVVKVEELD-LSGCLF-ALSPPPSSLPLPKFCLRPAK- 180
           S A VDRR  SRT SS  A AKRVV+VEEL+ LSGC F  +SPPPSSLPLPKF +RPAK 
Sbjct: 121 SAAVVDRRIPSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKA 180

Query: 181 LNCNVEAAGVDDGATTADDLRRLLRL 196
           LNCNVEA GVDDGA  ADDLRRLLRL
Sbjct: 181 LNCNVEAVGVDDGAAAADDLRRLLRL 194

[Close]

BLAST of MS021837 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 7.0e-06
Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 74  PPLLPPPILRPHRSLPSQPARSHSLNPKKSKSAKR-------SEKKFSPAA-VDRRAASR 133
           PPLLP P +    ++P Q   S       + S  R       SE     A  ++    +R
Sbjct: 64  PPLLPLPRVN-SSTVPLQRVNSSRPRVNNNSSLNRVAQTKAISETHMKKAEFIESARLTR 123

Query: 134 TSSTAAAAKRVVKVEELDLSG----CLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVDD 193
           T S    A ++    E    G     +  LSPPPSSLP+P+F ++P KL CNVEAAG  D
Sbjct: 124 TGSVPIQANQLRDFPE-GFDGYPGPAIMLLSPPPSSLPMPRFSIKP-KLRCNVEAAGKSD 183

Query: 194 GATTADDLRRLLRLR 197
            AT  +++RR+L+LR
Sbjct: 184 VAT--NNIRRVLQLR 193

[Close]

BLAST of MS021837 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 137 VKVEELDLSGCLFALSPPPSSLPLPKFCLRPAKLNCNVEAAGVDDGATTADDLRRLLRLR 196
           V  +++     +FA+SP PSSLPLP F  + AK    V    +DD A  + DLRRLLRL+
Sbjct: 80  VSADDIYAGSSIFAVSPAPSSLPLPSFSKKKAK--SQVVVVSIDDSA--SQDLRRLLRLK 135

The following BLAST results are available for this feature:

BLAST of MS021837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139188.1	1.3e-102	98.98	uncharacterized protein LOC111010153 [Momordica charantia]	[more]
KAA0063295.1	2.3e-51	66.67	uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa]	[more]
XP_008466665.1	6.7e-51	66.18	PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncha...	[more]
KGN60046.1	1.1e-50	66.02	hypothetical protein Csa_001363 [Cucumis sativus]	[more]
KAG6608604.1	9.4e-45	68.16	hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS021837 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS021837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CF43	6.3e-103	98.98	uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7VBL8	1.1e-51	66.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E771	3.3e-51	66.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CRS4	3.3e-51	66.18	uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=...	[more]
A0A0A0LJ69	5.6e-51	66.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1	[more]

BLAST of MS021837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20070.1	7.0e-06	36.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	1.2e-05	45.00	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..130
None	No IPR available	PANTHER	PTHR33670:SF14	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 133..196
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 133..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021837.1	MS021837.1	mRNA