MS021764 (gene) Bitter gourd (TR) v1

Overview


Name	MS021764
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	heavy metal-associated isoprenylated plant protein 28-like
Location	scaffold1: 238270 .. 238392 (-)
RNA-Seq Expression	MS021764
Synteny	MS021764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCAGGGGTGGAGAAGGTGGAGGTGGACGGGAACAGCCAGAAGGTGGCGGTGACCAGCTACGTTCACCGGAACAAGATACTGAAAGCGATTAGGAGGGGCGGCCTGAAGGCGGATTTCTGG

mRNA sequence

ATTGCAGGGGTGGAGAAGGTGGAGGTGGACGGGAACAGCCAGAAGGTGGCGGTGACCAGCTACGTTCACCGGAACAAGATACTGAAAGCGATTAGGAGGGGCGGCCTGAAGGCGGATTTCTGG

Coding sequence (CDS)

ATTGCAGGGGTGGAGAAGGTGGAGGTGGACGGGAACAGCCAGAAGGTGGCGGTGACCAGCTACGTTCACCGGAACAAGATACTGAAAGCGATTAGGAGGGGCGGCCTGAAGGCGGATTTCTGG

Protein sequence

IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW

Homology

[Close]

BLAST of MS021764 vs. NCBI nr
Match: XP_022139516.1 (uncharacterized protein LOC111010410 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
           + GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW
Sbjct: 105 LRGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 145

[Close]

BLAST of MS021764 vs. NCBI nr
Match: TXG51870.1 (hypothetical protein EZV62_021039 [Acer yangbiense])

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVDGNSQKV VT Y HRNKILKAIRRGGLKADFW
Sbjct: 28 LKGIEKVEVDGNSQKVVVTGYAHRNKILKAIRRGGLKADFW 68

[Close]

BLAST of MS021764 vs. NCBI nr
Match: XP_031268170.1 (heavy metal-associated isoprenylated plant protein 28-like [Pistacia vera])

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVDGNSQKV VT Y HRNKILKAIRRGGLKADFW
Sbjct: 25 LKGIEKVEVDGNSQKVVVTGYAHRNKILKAIRRGGLKADFW 65

[Close]

BLAST of MS021764 vs. NCBI nr
Match: XP_038715562.1 (heavy metal-associated isoprenylated plant protein 28-like [Tripterygium wilfordii] >KAF5740981.1 hypothetical protein HS088_TW11G01063 [Tripterygium wilfordii])

HSP 1 Score: 76.3 bits (186), Expect = 7.1e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVD NSQKVAVT Y HRNKILKAIRRGGLKADFW
Sbjct: 25 LKGIEKVEVDANSQKVAVTGYAHRNKILKAIRRGGLKADFW 65

[Close]

BLAST of MS021764 vs. NCBI nr
Match: GAV65835.1 (HMA domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 75.9 bits (185), Expect = 9.2e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVD NSQKV VT YVHRNKILKAIRRGGLKADFW
Sbjct: 16 LKGIEKVEVDANSQKVIVTGYVHRNKILKAIRRGGLKADFW 56

[Close]

BLAST of MS021764 vs. ExPASy Swiss-Prot
Match: F4IQG4 (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.7e-05
Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
           + GV+ VEV+   ++V V  YV R K+LKA+RR G +A+FW
Sbjct: 70  LRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFW 110

[Close]

BLAST of MS021764 vs. ExPASy Swiss-Prot
Match: F4JMB8 (Heavy metal-associated isoprenylated plant protein 44 OS=Arabidopsis thaliana OX=3702 GN=HIPP44 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.0e-04
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADF 41
           + GV+ VEVD    +V V  YV RNK+LKA+RR G +A+F
Sbjct: 75  LRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAGKRAEF 114

[Close]

BLAST of MS021764 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.0e-04
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 3  GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          GV+ VE+D + QKV VT YV R ++LK ++R G  A++W
Sbjct: 42 GVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEYW 80

[Close]

BLAST of MS021764 vs. ExPASy Swiss-Prot
Match: F4IC29 (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 6.7e-04
Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 3  GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          GV+ VE+D   QKV VT Y  + K+LK +R+ G +A+ W
Sbjct: 37 GVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELW 75

[Close]

BLAST of MS021764 vs. ExPASy TrEMBL
Match: A0A6J1CCX4 (uncharacterized protein LOC111010410 OS=Momordica charantia OX=3673 GN=LOC111010410 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.2e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
           + GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW
Sbjct: 105 LRGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 145

[Close]

BLAST of MS021764 vs. ExPASy TrEMBL
Match: A0A5C7H4E0 (HMA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021039 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVDGNSQKV VT Y HRNKILKAIRRGGLKADFW
Sbjct: 28 LKGIEKVEVDGNSQKVVVTGYAHRNKILKAIRRGGLKADFW 68

[Close]

BLAST of MS021764 vs. ExPASy TrEMBL
Match: A0A7J7D3S9 (HMA domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G01063 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVD NSQKVAVT Y HRNKILKAIRRGGLKADFW
Sbjct: 25 LKGIEKVEVDANSQKVAVTGYAHRNKILKAIRRGGLKADFW 65

[Close]

BLAST of MS021764 vs. ExPASy TrEMBL
Match: A0A6J1IV94 (heavy metal-associated isoprenylated plant protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111480911 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-11
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + GVEKVEVD NSQKVAVTSY+HRNKILKA+RR GLKADFW
Sbjct: 25 LKGVEKVEVDANSQKVAVTSYIHRNKILKAMRRSGLKADFW 65

[Close]

BLAST of MS021764 vs. ExPASy TrEMBL
Match: A0A1Q3BD56 (HMA domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09349 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-11
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          + G+EKVEVD NSQKV VT YVHRNKILKAIRRGGLKADFW
Sbjct: 16 LKGIEKVEVDANSQKVIVTGYVHRNKILKAIRRGGLKADFW 56

[Close]

BLAST of MS021764 vs. TAIR 10
Match: AT2G18196.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.9e-06
Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
           + GV+ VEV+   ++V V  YV R K+LKA+RR G +A+FW
Sbjct: 70  LRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFW 110

[Close]

BLAST of MS021764 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 7.3e-06
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 3  GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          GV+ VE+D + QKV VT YV R ++LK ++R G  A++W
Sbjct: 42 GVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEYW 80

[Close]

BLAST of MS021764 vs. TAIR 10
Match: AT4G10465.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 7.3e-06
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 1   IAGVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADF 41
           + GV+ VEVD    +V V  YV RNK+LKA+RR G +A+F
Sbjct: 75  LRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRRAGKRAEF 114

[Close]

BLAST of MS021764 vs. TAIR 10
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 4.7e-05
Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 3  GVEKVEVDGNSQKVAVTSYVHRNKILKAIRRGGLKADFW 42
          GV+ VE+D   QKV VT Y  + K+LK +R+ G +A+ W
Sbjct: 37 GVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELW 75

[Close]

BLAST of MS021764 vs. TAIR 10
Match: AT3G48970.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 40.4 bits (93), Expect = 4.0e-04
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 1  IAGVEKVEVDGNSQKVAVTSY-VHRNKILKAIRRGGLKADFW 42
          + GVE+VEV+  +QKV    Y +   K+LKA+RR G  A+ W
Sbjct: 28 LKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELW 69

The following BLAST results are available for this feature:

BLAST of MS021764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139516.1	1.3e-12	95.12	uncharacterized protein LOC111010410 [Momordica charantia]	[more]
TXG51870.1	4.1e-11	85.37	hypothetical protein EZV62_021039 [Acer yangbiense]	[more]
XP_031268170.1	4.1e-11	85.37	heavy metal-associated isoprenylated plant protein 28-like [Pistacia vera]	[more]
XP_038715562.1	7.1e-11	85.37	heavy metal-associated isoprenylated plant protein 28-like [Tripterygium wilford...	[more]
GAV65835.1	9.2e-11	85.37	HMA domain-containing protein [Cephalotus follicularis]	[more]

BLAST of MS021764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQG4	2.7e-05	48.78	Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX...	[more]
F4JMB8	1.0e-04	52.50	Heavy metal-associated isoprenylated plant protein 44 OS=Arabidopsis thaliana OX...	[more]
B3H6D0	1.0e-04	48.72	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
F4IC29	6.7e-04	46.15	Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS021764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCX4	6.2e-13	95.12	uncharacterized protein LOC111010410 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5C7H4E0	2.0e-11	85.37	HMA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021039 PE=4...	[more]
A0A7J7D3S9	3.4e-11	85.37	HMA domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G...	[more]
A0A6J1IV94	4.5e-11	85.37	heavy metal-associated isoprenylated plant protein 30-like OS=Cucurbita maxima O...	[more]
A0A1Q3BD56	4.5e-11	85.37	HMA domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0934...	[more]

BLAST of MS021764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18196.1	1.9e-06	48.78	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	7.3e-06	48.72	Heavy metal transport/detoxification superfamily protein	[more]
AT4G10465.1	7.3e-06	52.50	Heavy metal transport/detoxification superfamily protein	[more]
AT1G06330.1	4.7e-05	46.15	Heavy metal transport/detoxification superfamily protein	[more]
AT3G48970.1	4.0e-04	45.24	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..39 e-value: 4.1E-6 score: 28.9
None	No IPR available	PANTHER	PTHR47856	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20-LIKE	coord: 1..41
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021764.1	MS021764.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding