MS021291 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCTTGTTCCAATGCCCTTGTTGTTCTTGTTTCTGCTTCATGAAGCCCAAAAATGGCAAACCAAAGGCTCAAGAAAAACCCAAGGAAGCTCCACCACCACCACCAACCAAGGAAGAGAAGAAAGAA ATGAAGTTCTTGTTCCAATGCCCTTGTTGTTCTTGTTTCTGCTTCATGAAGCCCAAAAATGGCAAACCAAAGGCTCAAGAAAAACCCAAGGAAGCTCCACCACCACCACCAACCAAGGAAGAGAAGAAAGAA ATGAAGTTCTTGTTCCAATGCCCTTGTTGTTCTTGTTTCTGCTTCATGAAGCCCAAAAATGGCAAACCAAAGGCTCAAGAAAAACCCAAGGAAGCTCCACCACCACCACCAACCAAGGAAGAGAAGAAAGAA MKFLFQCPCCSCFCFMKPKNGKPKAQEKPKEAPPPPPTKEEKKE Homology
BLAST of MS021291 vs. NCBI nr
Match: XP_011654067.1 (uncharacterized protein LOC105435295 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07 Identity = 36/53 (67.92%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of MS021291 vs. NCBI nr
Match: XP_038897115.1 (uncharacterized protein LOC120085277 [Benincasa hispida]) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07 Identity = 36/50 (72.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of MS021291 vs. NCBI nr
Match: KAF5178591.1 (hypothetical protein FRX31_031822 [Thalictrum thalictroides]) HSP 1 Score: 64.3 bits (155), Expect = 3.0e-07 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of MS021291 vs. NCBI nr
Match: KAG9129089.1 (hypothetical protein Leryth_019826 [Lithospermum erythrorhizon]) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
BLAST of MS021291 vs. NCBI nr
Match: XP_021682431.1 (uncharacterized protein LOC110666297 [Hevea brasiliensis]) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06 Identity = 32/44 (72.73%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of MS021291 vs. ExPASy TrEMBL
Match: A0A2G5CWE6 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03600115v1 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06 Identity = 32/45 (71.11%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of MS021291 vs. ExPASy TrEMBL
Match: A0A2C9UE71 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G088200 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06 Identity = 32/44 (72.73%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of MS021291 vs. ExPASy TrEMBL
Match: A0A1S4E585 (LOW QUALITY PROTEIN: uncharacterized protein LOC103503106 OS=Cucumis melo OX=3656 GN=LOC103503106 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06 Identity = 36/55 (65.45%), Postives = 39/55 (70.91%), Query Frame = 0
BLAST of MS021291 vs. ExPASy TrEMBL
Match: A0A398ACC4 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA02T06139Z PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.7e-06 Identity = 33/45 (73.33%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MS021291 vs. ExPASy TrEMBL
Match: A0A3P6D1Q5 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC2T07920H PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.7e-06 Identity = 33/45 (73.33%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MS021291 vs. TAIR 10
Match: AT5G53880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-09 Identity = 34/51 (66.67%), Postives = 35/51 (68.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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