MS021267 (gene) Bitter gourd (TR) v1

Overview


Name	MS021267
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RAB GTPase
Location	scaffold358: 620476 .. 622504 (+)
RNA-Seq Expression	MS021267
Synteny	MS021267

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGGTTCTTACACTTCCCTCATTCTGTTCCATTCTCGCATTGTCTTCGTCCCGATCTTGATCTTTCTGTTTTCTGTGTGTTCATTGAGATCTGATCCTGCTATTCTTTAGATTTCGATTTTTAACTGAGTTGTTGGGAAGCCGCGACGGGGACGTCGGAATTTGGATTTATAGGGCTTTTAGATGTGTTCTTCTGTTGTTTAGGATCTAAGAACTAAATGGTATTAAGGAATTGCTTGCTTATTGAGAATTGAGACGGTGACTGCGTTATTTATCTAATGCAATTGGAGTTTTCGGAATTACATTTTTAGGTACCTTCAGTTTCAAGAAAAAATTTTAATGCTTTTTTATTTTTACACACGCCATTTTTTGTGCCAGTTTTAGAGTTGTTAATTTTGATCGGTAATGGGACGTCACCATCGATCTTCAAGTGGTGGGCCCCCATTTTCAAGTGGACTCTGAAACCTCTCTTTAAAATAGTAATCTGGATTTGACAAGAGAAGAATACTCGTGCCCAGACAAAATTTTGTTGCCATTGTTATTGAAATTTGCCTTTAGAAAAGGAGTTCTAGAATTTTGGCCCAGTTTCTGTATGATGCAATTGGTTCTTTTTACCTTCATCAGTGTAGTGTGGCTCTGGCTCCGTGCATTTGTACTCCCATTCAGCCTCTATGGTCGATTTGTTTTCTTAGTCTCTGCAAGGTGATGACTGCTAATGATTCTTATTACCAATCTCAGCCTTTTATACAAATTATTTGTTCGGGAGGTCTGATCTCAGTAAGGCTGCCGGAGACATCACCAAACCACCTAGGGTGTCTCTTGCAAAAACGAATTTGTAGAGAGTTTTCTAAAACCCCAGTCCAGCCACCTAACTGATATAGTCTCGAATCTATTTTTTGTCTTTACTTAACTTAGTAGCATAGTGTAAGCTCATTTAAGGCACGGATAAGATATGGTTGATTGGTAGTAAGTTGAAACAAATAAACGGATCATAGGTTGGTTGAATGTTGAGTTTCGCTTAGGCCATGCATTCACCGACTATTTATGTTGTGATTTTTATATCTACTTGCTGTCGTAGAAAGATCCCATTTACAAGTTGAACTTGAAATGCAATCCGTAACTAATCAGGCTCGTGTCAAAATTTAGTATGCAAGGCTTATTTTTTGTGTAGATTTGGCATTGGTAGCAAAGCCTGAAAAGTAATACTGAAGACTTGAAAGTGTTGCAGAGGTTTCATGATATGTAACCTCAAACGAGACTAGTGAAAAAACCTGCCTTTTATTATTATTTGGTGATACTTGTTCCATTTGTCTTGGTTTACCTTCTGGGTAATATATGAAACTATTGTGAAGTCATCTCTTATATATGCTTCTTTTTGCCAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACGGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTCGAGTCTCTGAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAAATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCA

mRNA sequence

ATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGGTTCTTACACTTCCCTCATTCTGTTCCATTCTCGCATTGTCTTCGTCCCGATCTTGATCTTTCTGTTTTCTGTGTTCATCTCTTATATATGCTTCTTTTTGCCAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACGGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTCGAGTCTCTGAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAAATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCA

Coding sequence (CDS)

ATGGCTGCGTATAGAGCGGACGACGACTACGATTACCTCTTTAAAGTGGTTCTCATCGGGGACTCTGGTGTGGGCAAATCCAATCTCCTCTCCAGGTTTACGCGCAATGAGTTCAGTCTCGAGTCCAAATCCACAATCGGTGTCGAATTCGCTACTAGAAGTATCCGGGTCGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGTCAAGAAAGGTTCTTACACTTCCCTCATTCTGTTCCATTCTCGCATTGTCTTCGTCCCGATCTTGATCTTTCTGTTTTCTGTGTTCATCTCTTATATATGCTTCTTTTTGCCAGATACCGAGCAATCACAAGTGCATACTATCGAGGGGCGGTTGGTGCATTGCTTGTCTATGATGTCACACGACATGTCACGTTTGAAAACGTCGAGAGATGGTTGAAAGAGCTTAGAGATCATACTGATTCCAATATTGTGATAATGCTAGTCGGTAACAAGGCAGACTTACGACATCTGCGTGCTGTTTCAACGGAGGATGCCAAGGCCTTTGCAGAGAGGGAGAACACATTCTTCATGGAGACATCTGCGCTCGAGTCTCTGAATGTAGAGAATGCTTTCACCGAAGTGCTAACCCAAATCTATCGCGTAGTTTGCAGAAAAGCGCTCGAAATTGGGGAGGATCCCGCGGCATTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCAGCAGTGAAGAAAGTTGGTTGCTGCTCTTCA

Protein sequence

MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS

Homology

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BLAST of MS021267 vs. NCBI nr
Match: XP_022139663.1 (ras-related protein RABA1f [Momordica charantia])

HSP 1 Score: 410.2 bits (1053), Expect = 1.3e-110
Identity = 217/252 (86.11%), Postives = 217/252 (86.11%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCSS
Sbjct: 241 VSAVKKVGCCSS 217

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BLAST of MS021267 vs. NCBI nr
Match: XP_038897555.1 (ras-related protein RABA1f [Benincasa hispida])

HSP 1 Score: 407.5 bits (1046), Expect = 8.2e-110
Identity = 215/252 (85.32%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           E+ENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 EKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCSS
Sbjct: 241 VSAVKKVGCCSS 217

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BLAST of MS021267 vs. NCBI nr
Match: KAB1216525.1 (Ras-related protein RABA1f [Morella rubra])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 217/266 (81.58%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLF------------- 120
           +VKAQIWDTAGQERF+ F   +    C   D+D  VF     Y+  +             
Sbjct: 61  VVKAQIWDTAGQERFIVF---LGLPGCPANDMDRMVF----FYIDAWFSGKSNRERKQTD 120

Query: 121 -ARYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 180
             +YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR
Sbjct: 121 KRKYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 180

Query: 181 HLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAA 240
           HLRAVSTEDA AFAERENTFFMETSALESLNVENAFTEVLTQIYRVV RKAL+IG+DPAA
Sbjct: 181 HLRAVSTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAA 240

Query: 241 LPKGQTINVGNKDDVSAVKKVGCCSS 253
           LPKGQTINVGNKDDVSAVKKVGCCS+
Sbjct: 241 LPKGQTINVGNKDDVSAVKKVGCCSA 259

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BLAST of MS021267 vs. NCBI nr
Match: XP_042485414.1 (ras-related protein RABA1f-like isoform X1 [Macadamia integrifolia])

HSP 1 Score: 405.2 bits (1040), Expect = 4.1e-109
Identity = 211/252 (83.73%), Postives = 223/252 (88.49%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           ++KAQIWDTAGQER++          C    LD S++         + RYRAITSAYYRG
Sbjct: 61  VIKAQIWDTAGQERWVMDYLGGGRHACRMLWLDRSIW---------YVRYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAK+FA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKSFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           EREN FFMETSALES+NVENAFTEVLTQIYRVV RKAL+IG+DPAALPKGQTINVG KDD
Sbjct: 181 ERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGTKDD 240

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCS+
Sbjct: 241 VSAVKKVGCCSA 243

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BLAST of MS021267 vs. NCBI nr
Match: XP_004146038.1 (ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-related protein RABA1f [Cucumis melo] >ADN33802.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0066790.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >KGN55093.1 hypothetical protein Csa_012062 [Cucumis sativus] >TYK27937.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 5.3e-109
Identity = 213/252 (84.52%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDA+AFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           E+ENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 EKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSA+KKVGCCSS
Sbjct: 241 VSAMKKVGCCSS 217

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BLAST of MS021267 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.6e-108
Identity = 206/252 (81.75%), Postives = 214/252 (84.92%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIM VGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALES+NVENAFTEVL+QIYRVV RKAL+IG+DPAALPKGQTINVG+KDD
Sbjct: 181 ERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCS+
Sbjct: 241 VSAVKKVGCCSN 217

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BLAST of MS021267 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.4e-106
Identity = 202/249 (81.12%), Postives = 212/249 (85.14%), Query Frame = 0


Query: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVK 63
           YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRVDDKIVK
Sbjct: 5   YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVK 64

Query: 64  AQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRGAVG 123
           AQIWDTAGQE                                   RYRAITSAYYRGAVG
Sbjct: 65  AQIWDTAGQE-----------------------------------RYRAITSAYYRGAVG 124

Query: 124 ALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAERE 183
           AL+VYD+TRHVTFENVERWLKELRDHTD NIVIMLVGNKADLRHLRAVSTEDAKAFAERE
Sbjct: 125 ALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERE 184

Query: 184 NTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDDVSA 243
           NTFFMETSALESLNVENAFTEVLT+IY+VVCRKALE+G+DPAALPKGQTINVG KDDVSA
Sbjct: 185 NTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVG-KDDVSA 217

Query: 244 VKKVGCCSS 253
           VKKVGCCSS
Sbjct: 245 VKKVGCCSS 217

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BLAST of MS021267 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 9.2e-104
Identity = 198/252 (78.57%), Postives = 210/252 (83.33%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHT++NIVIMLVGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALE+LNVENAFTEVL+QIYRV  +KAL+IG+D   LPKGQ+INVG+KDD
Sbjct: 181 ERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDHTTLPKGQSINVGSKDD 217

Query: 241 VSAVKKVGCCSS 253
           VS VKKVGCCSS
Sbjct: 241 VSEVKKVGCCSS 217

[Close]

BLAST of MS021267 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.4e-99
Identity = 190/253 (75.10%), Postives = 207/253 (81.82%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRHLRA+STE+AKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAISTEEAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP-AALPKGQTINVGNKD 240
           ERENTFFMETSALE++NV+NAFTEVLTQIYRVV +KALE G+DP  ALPKGQ INVG +D
Sbjct: 181 ERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTALPKGQMINVGGRD 218

Query: 241 DVSAVKKVGCCSS 253
           D+SAVKK GCCS+
Sbjct: 241 DISAVKKPGCCSA 218

[Close]

BLAST of MS021267 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.2e-97
Identity = 186/253 (73.52%), Postives = 204/253 (80.63%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+N VIMLVGNKADL HLRA+STE+ K FA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTEEVKDFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP-AALPKGQTINVGNKD 240
           ERENTFFMETSALE++NVENAFTEVLTQIYRVV +KAL+ G+DP  ALPKGQ INVG++D
Sbjct: 181 ERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPTTALPKGQMINVGSRD 218

Query: 241 DVSAVKKVGCCSS 253
           DVSAVKK GCC++
Sbjct: 241 DVSAVKKSGCCAT 218

[Close]

BLAST of MS021267 vs. ExPASy TrEMBL
Match: A0A6J1CG72 (ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.1e-111
Identity = 217/252 (86.11%), Postives = 217/252 (86.11%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCSS
Sbjct: 241 VSAVKKVGCCSS 217

[Close]

BLAST of MS021267 vs. ExPASy TrEMBL
Match: A0A6A1VUY6 (Ras-related protein RABA1f OS=Morella rubra OX=262757 GN=CJ030_MR4G023062 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 8.9e-110
Identity = 217/266 (81.58%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLF------------- 120
           +VKAQIWDTAGQERF+ F   +    C   D+D  VF     Y+  +             
Sbjct: 61  VVKAQIWDTAGQERFIVF---LGLPGCPANDMDRMVF----FYIDAWFSGKSNRERKQTD 120

Query: 121 -ARYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 180
             +YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR
Sbjct: 121 KRKYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 180

Query: 181 HLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAA 240
           HLRAVSTEDA AFAERENTFFMETSALESLNVENAFTEVLTQIYRVV RKAL+IG+DPAA
Sbjct: 181 HLRAVSTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDIGDDPAA 240

Query: 241 LPKGQTINVGNKDDVSAVKKVGCCSS 253
           LPKGQTINVGNKDDVSAVKKVGCCS+
Sbjct: 241 LPKGQTINVGNKDDVSAVKKVGCCSA 259

[Close]

BLAST of MS021267 vs. ExPASy TrEMBL
Match: A0A5D3DVT8 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001250 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 213/252 (84.52%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDA+AFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           E+ENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 EKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSA+KKVGCCSS
Sbjct: 241 VSAMKKVGCCSS 217

[Close]

BLAST of MS021267 vs. ExPASy TrEMBL
Match: E5GBG0 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 213/252 (84.52%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDA+AFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           E+ENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 EKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSA+KKVGCCSS
Sbjct: 241 VSAMKKVGCCSS 217

[Close]

BLAST of MS021267 vs. ExPASy TrEMBL
Match: A0A0A0L041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 213/252 (84.52%), Postives = 216/252 (85.71%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDA+AFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAQAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           E+ENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD
Sbjct: 181 EKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSA+KKVGCCSS
Sbjct: 241 VSAMKKVGCCSS 217

[Close]

BLAST of MS021267 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 392.5 bits (1007), Expect = 2.6e-109
Identity = 206/252 (81.75%), Postives = 214/252 (84.92%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIM VGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALES+NVENAFTEVL+QIYRVV RKAL+IG+DPAALPKGQTINVG+KDD
Sbjct: 181 ERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDD 217

Query: 241 VSAVKKVGCCSS 253
           VSAVKKVGCCS+
Sbjct: 241 VSAVKKVGCCSN 217

[Close]

BLAST of MS021267 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 377.9 bits (969), Expect = 6.5e-105
Identity = 198/252 (78.57%), Postives = 210/252 (83.33%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHT++NIVIMLVGNKADLRHLRAVSTEDAKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           ERENTFFMETSALE+LNVENAFTEVL+QIYRV  +KAL+IG+D   LPKGQ+INVG+KDD
Sbjct: 181 ERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDHTTLPKGQSINVGSKDD 217

Query: 241 VSAVKKVGCCSS 253
           VS VKKVGCCSS
Sbjct: 241 VSEVKKVGCCSS 217

[Close]

BLAST of MS021267 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 364.0 bits (933), Expect = 9.7e-101
Identity = 190/253 (75.10%), Postives = 207/253 (81.82%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRHLRA+STE+AKAFA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAISTEEAKAFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP-AALPKGQTINVGNKD 240
           ERENTFFMETSALE++NV+NAFTEVLTQIYRVV +KALE G+DP  ALPKGQ INVG +D
Sbjct: 181 ERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTALPKGQMINVGGRD 218

Query: 241 DVSAVKKVGCCSS 253
           D+SAVKK GCCS+
Sbjct: 241 DISAVKKPGCCSA 218

[Close]

BLAST of MS021267 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-98
Identity = 186/253 (73.52%), Postives = 204/253 (80.63%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           IVKAQIWDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IVKAQIWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYDVTRHVTFENVERWLKELRDHTD+N VIMLVGNKADL HLRA+STE+ K FA
Sbjct: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTEEVKDFA 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP-AALPKGQTINVGNKD 240
           ERENTFFMETSALE++NVENAFTEVLTQIYRVV +KAL+ G+DP  ALPKGQ INVG++D
Sbjct: 181 ERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPTTALPKGQMINVGSRD 218

Query: 241 DVSAVKKVGCCSS 253
           DVSAVKK GCC++
Sbjct: 241 DVSAVKKSGCCAT 218

[Close]

BLAST of MS021267 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 354.4 bits (908), Expect = 7.7e-98
Identity = 180/251 (71.71%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERFLHFPHSVPFSHCLRPDLDLSVFCVHLLYMLLFARYRAITSAYYRG 120
           I+KAQ+WDTAGQE                                   RYRAITSAYYRG
Sbjct: 61  IIKAQLWDTAGQE-----------------------------------RYRAITSAYYRG 120

Query: 121 AVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFA 180
           AVGALLVYD+TRH+TFENVERWLKELRDHTD+N+VIMLVGNKADLRHLRAV TE+A++F+
Sbjct: 121 AVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAVPTEEARSFS 180

Query: 181 ERENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNKDD 240
           EREN FFMETSAL++ NVE AFT VLTQIYRV+ RKAL+   DP +LPKGQTI++GNKDD
Sbjct: 181 ERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDPMSLPKGQTIDIGNKDD 216

Query: 241 VSAVKKVGCCS 252
           V+AVK  GCCS
Sbjct: 241 VTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of MS021267 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139663.1	1.3e-110	86.11	ras-related protein RABA1f [Momordica charantia]	[more]
XP_038897555.1	8.2e-110	85.32	ras-related protein RABA1f [Benincasa hispida]	[more]
KAB1216525.1	1.8e-109	81.58	Ras-related protein RABA1f [Morella rubra]	[more]
XP_042485414.1	4.1e-109	83.73	ras-related protein RABA1f-like isoform X1 [Macadamia integrifolia]	[more]
XP_004146038.1	5.3e-109	84.52	ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-rela...	[more]

BLAST of MS021267 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	3.6e-108	81.75	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q40521	4.4e-106	81.12	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9LK99	9.2e-104	78.57	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q9S810	1.4e-99	75.10	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	2.2e-97	73.52	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of MS021267 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG72	6.1e-111	86.11	ras-related protein RABA1f OS=Momordica charantia OX=3673 GN=LOC111010513 PE=4 S...	[more]
A0A6A1VUY6	8.9e-110	81.58	Ras-related protein RABA1f OS=Morella rubra OX=262757 GN=CJ030_MR4G023062 PE=4 S...	[more]
A0A5D3DVT8	2.6e-109	84.52	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GBG0	2.6e-109	84.52	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0L041	2.6e-109	84.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1	[more]

BLAST of MS021267 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	2.6e-109	81.75	RAB GTPase homolog A1F	[more]
AT3G15060.1	6.5e-105	78.57	RAB GTPase homolog A1G	[more]
AT1G28550.1	9.7e-101	75.10	RAB GTPase homolog A1I	[more]
AT2G33870.1	1.6e-98	73.52	RAB GTPase homolog A1H	[more]
AT4G18430.1	7.7e-98	71.71	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 50.17 coord: 187..209 score: 40.99 coord: 14..35 score: 55.2 coord: 37..53 score: 36.77
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..212 e-value: 3.0E-99 score: 345.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..212 e-value: 2.2E-14 score: 63.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..251 e-value: 0.0024 score: -0.6
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..75
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..75 coord: 109..250
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 109..250
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..250 score: 34.266743
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..214 score: 10.013132
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..210 e-value: 1.38225E-127 score: 356.485
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..208 e-value: 7.0E-9 score: -5.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..77 e-value: 2.3E-23 score: 82.6 coord: 109..210 e-value: 1.2E-32 score: 112.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..252 score: 15.235906
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..250 e-value: 9.1E-68 score: 229.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..215
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..75 e-value: 4.3E-18 score: 63.6 coord: 108..205 e-value: 5.7E-16 score: 56.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021267.1	MS021267.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding