MS021218 (gene) Bitter gourd (TR) v1

Overview


Name	MS021218
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Peptide-methionine (R)-S-oxide reductase
Location	scaffold358: 88495 .. 89542 (-)
RNA-Seq Expression	MS021218
Synteny	MS021218

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCAGCAATGGCTGCCAGAAGTTCGAGTTTATCAATTCCAACTGGGTTTCTCAATTCCTCCAAAACCCAACAAGGTTTTAAGATCATTTTTGTGTCATCTCCAAGTTTCAGAGCACCCAAAAAGCTTTCATCATCTTTCGTTCGTGCAATGGGCTCCTCCTCCTCTTCCCAGCGACCAGATGGCGTCCGAGGTTTTTTCTCTTCCTTTCTACTTGTGATTTACCATAAATTTCATCATACTCTCTTTGTGTTTTCTCTCTTCCTTTTCGCCATCAAATATTGTTTCTTCAGACTGACTTCTATCATTACTGTAATTCTTAACTTCCTTTCTGATGCTGGAGGGTTCCAAGTTGAGATTGAACTGTATATGATAAAGTTTATCAGAATCCAGATTTAAGTATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTTCTCTTACCAATTTGGTGCTATGAACATGTCTCTGATTTGACTATTGAAGAAGCTCTTGTTGGGTGCAGAGGCTGAGGCTGACACCACGGATTACAAATCTATAAGCAATGATGAATGGAAGAAACGGCTCACAAAGGAGCAGTTTGATATTACTCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGGTATGCTGTAATATAGTTTCTTCAACGCACCATTTTCTCATTATGTTCTATTTTAACCTTTTCCCTTCAATTCTAGTGAGTACTGGAACACCAAAACGCCAGGGACATACCACTGTATATGTTGCGACACAACTCTGTTTGAGTAAATATTCTGGTCCTTTTAGAAACTTCTCTATGCAGCTGCTTTTGTTGTATATAACTTCCAATAACTTGCAATATTCTCTCTTCAGATCATCTACTAAATTTGACAGTGGGACTGGTTGGCCATCATATTACCAGCCTGTTGGTGATAACGTCAAATCCAAGCTAGACTTGTCTATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGTTTGTGATGCTCATCTGGGCCATGTATTCGATGATGGACCGGCGCCAACTGGGAAGCGCTACTGCATCAAT

mRNA sequence

GTGTCAGCAATGGCTGCCAGAAGTTCGAGTTTATCAATTCCAACTGGGTTTCTCAATTCCTCCAAAACCCAACAAGGTTTTAAGATCATTTTTGTGTCATCTCCAAGTTTCAGAGCACCCAAAAAGCTTTCATCATCTTTCGTTCGTGCAATGGGCTCCTCCTCCTCTTCCCAGCGACCAGATGGCGTCCGAGAGGCTGAGGCTGACACCACGGATTACAAATCTATAAGCAATGATGAATGGAAGAAACGGCTCACAAAGGAGCAGTTTGATATTACTCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGTGAGTACTGGAACACCAAAACGCCAGGGACATACCACTGTATATGTTGCGACACAACTCTGTTTGAATCATCTACTAAATTTGACAGTGGGACTGGTTGGCCATCATATTACCAGCCTGTTGGTGATAACGTCAAATCCAAGCTAGACTTGTCTATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGTTTGTGATGCTCATCTGGGCCATGTATTCGATGATGGACCGGCGCCAACTGGGAAGCGCTACTGCATCAAT

Coding sequence (CDS)

GTGTCAGCAATGGCTGCCAGAAGTTCGAGTTTATCAATTCCAACTGGGTTTCTCAATTCCTCCAAAACCCAACAAGGTTTTAAGATCATTTTTGTGTCATCTCCAAGTTTCAGAGCACCCAAAAAGCTTTCATCATCTTTCGTTCGTGCAATGGGCTCCTCCTCCTCTTCCCAGCGACCAGATGGCGTCCGAGAGGCTGAGGCTGACACCACGGATTACAAATCTATAAGCAATGATGAATGGAAGAAACGGCTCACAAAGGAGCAGTTTGATATTACTCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGTGAGTACTGGAACACCAAAACGCCAGGGACATACCACTGTATATGTTGCGACACAACTCTGTTTGAATCATCTACTAAATTTGACAGTGGGACTGGTTGGCCATCATATTACCAGCCTGTTGGTGATAACGTCAAATCCAAGCTAGACTTGTCTATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGTTTGTGATGCTCATCTGGGCCATGTATTCGATGATGGACCGGCGCCAACTGGGAAGCGCTACTGCATCAAT

Protein sequence

VSAMAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTGKRYCIN

Homology

[Close]

BLAST of MS021218 vs. NCBI nr
Match: XP_022131780.1 (peptide methionine sulfoxide reductase B1, chloroplastic [Momordica charantia])

HSP 1 Score: 382.9 bits (982), Expect = 1.6e-102
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGV 63
           MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDG+
Sbjct: 1   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGI 60

Query: 64  REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT 123
           REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT
Sbjct: 61  REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT 120

Query: 124 LFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP 183
           LFESSTKFDSGTGWPSYYQPV DNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP
Sbjct: 121 LFESSTKFDSGTGWPSYYQPVRDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP 180

Query: 184 TGKRYCIN 192
           TGKRYCIN
Sbjct: 181 TGKRYCIN 188

[Close]

BLAST of MS021218 vs. NCBI nr
Match: XP_022935958.1 (peptide methionine sulfoxide reductase B1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83
Identity = 158/191 (82.72%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSP-SFRAPK--KLSSSFVRAMGSSSSSQRP 63
           MA+RS +LSIP+GF+NSSKTQQ FK + + SP  FRAPK  KLSSS +RAMGSSSSSQRP
Sbjct: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 60

Query: 64  DGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICC 123
           DG+R  EA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  DGIR--EAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120

Query: 124 DTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDG 183
           +T LFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVFDDG
Sbjct: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180

Query: 184 PAPTGKRYCIN 192
           P PTGKRYCIN
Sbjct: 181 PPPTGKRYCIN 189

[Close]

BLAST of MS021218 vs. NCBI nr
Match: XP_038898315.1 (peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 164/201 (81.59%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   VSAMAARSSSLSI-PTGFLNSSKTQQGFKIIFVSS-PSFRAP--KKLSSSFVRAMGSSSS 60
           +SAMAARS + SI PTGF++SSKTQQ FK + +SS PSF +P  KKLSSS VR MGSSSS
Sbjct: 1   MSAMAARSLNSSILPTGFISSSKTQQNFKFLSLSSPPSFGSPKNKKLSSSSVRVMGSSSS 60

Query: 61  SQRPDGVRE------AEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTK 120
           SQRPDG++E      AEA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTK
Sbjct: 61  SQRPDGIQEAQLPVGAEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTK 120

Query: 121 TPGTYHCICCDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCD 180
           TPG YHCICC+T LFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCD
Sbjct: 121 TPGIYHCICCNTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCD 180

Query: 181 AHLGHVFDDGPAPTGKRYCIN 192
           AHLGHVFDDGP PTGKRYCIN
Sbjct: 181 AHLGHVFDDGPPPTGKRYCIN 201

[Close]

BLAST of MS021218 vs. NCBI nr
Match: KAG6591779.1 (Peptide methionine sulfoxide reductase B1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 157/191 (82.20%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSP-SFRAPK--KLSSSFVRAMGSSSSSQRP 63
           MA+RS +LSIP+GF+NSSKTQQ FK + + SP  FRAPK  KLSSS +RAMG+SSSSQRP
Sbjct: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKNEKLSSSSIRAMGASSSSQRP 60

Query: 64  DGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICC 123
           DG+R  EA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  DGIR--EAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120

Query: 124 DTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDG 183
           +T LFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVFDDG
Sbjct: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180

Query: 184 PAPTGKRYCIN 192
           P PTGKRYCIN
Sbjct: 181 PPPTGKRYCIN 189

[Close]

BLAST of MS021218 vs. NCBI nr
Match: KAG7024657.1 (Peptide methionine sulfoxide reductase B1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSP-SFRAPK--KLSSSFVRAMGSSSSSQRP 63
           MA+RS  LSIP+GF+NSSKTQQ FK + + SP  FRAPK  KLSSS +RAMG+SSSSQRP
Sbjct: 1   MASRSLKLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKNEKLSSSSIRAMGASSSSQRP 60

Query: 64  DGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICC 123
           DG+R  EA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  DGIR--EAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120

Query: 124 DTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDG 183
           +T LFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVFDDG
Sbjct: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180

Query: 184 PAPTGKRYCIN 192
           P PTGKRYCIN
Sbjct: 181 PPPTGKRYCIN 189

[Close]

BLAST of MS021218 vs. ExPASy Swiss-Prot
Match: Q9C8M2 (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MSRB1 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-64
Identity = 125/186 (67.20%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 7   RSSSLSIPTGFLNSSKT-QQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGVRE 66
           +SS +S  T     SKT   GF     +  S   P+ LS S V +MGSSSSS +PD V+E
Sbjct: 11  QSSFVSARTRLNYVSKTNHSGF-----ACRSLSKPRNLSLS-VYSMGSSSSSPKPDNVQE 70

Query: 67  AEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLF 126
           AE +  ++ S+S +EWKKRLT EQ+ ITRQKGTERAFTGEYWN+KTPG Y+C+CCDT LF
Sbjct: 71  AEKN--EFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLF 130

Query: 127 ESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTG 186
           +SSTKFDSGTGWPSYYQP+G+NVK+KLDLSIIFMPR+EV+CAVC+AHLGHVFDDGP PTG
Sbjct: 131 DSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPRPTG 188

Query: 187 KRYCIN 192
           KRYC+N
Sbjct: 191 KRYCLN 188

[Close]

BLAST of MS021218 vs. ExPASy Swiss-Prot
Match: Q0DC89 (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MSRB1 PE=2 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-63
Identity = 116/153 (75.82%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 48  VRAMG-------SSSSSQRPDGVREAEAD-TTDYK-SISNDEWKKRLTKEQFDITRQKGT 107
           VRAMG       SSSSS  P G  +A+A    +Y  S++++EW+KRLTK+Q+ ITRQKGT
Sbjct: 52  VRAMGAASSSSSSSSSSPSPQGQAQAQAQGKPNYSTSLTDEEWRKRLTKDQYYITRQKGT 111

Query: 108 ERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIF 167
           ERAFTGEYWNTKTPG YHC+CCDT LFESSTKFDSGTGWPSYYQP+GDNVK KLD+SIIF
Sbjct: 112 ERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFDSGTGWPSYYQPIGDNVKCKLDMSIIF 171

Query: 168 MPREEVLCAVCDAHLGHVFDDGPAPTGKRYCIN 192
           MPR EVLCAVCDAHLGHVFDDGP PTGKRYCIN
Sbjct: 172 MPRTEVLCAVCDAHLGHVFDDGPRPTGKRYCIN 204

[Close]

BLAST of MS021218 vs. ExPASy Swiss-Prot
Match: Q8DJK9 (Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=msrB PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 80  EWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGWPS 139
           EW+ +LT EQ+ +TR+KGTERAFTG YWN K PG Y C+CC T LF S TK+DSGTGWPS
Sbjct: 10  EWQAQLTPEQYYVTRKKGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDSGTGWPS 69

Query: 140 YYQPVG-DNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTGKRYCIN 192
           ++QP+  +N++ + DLS   M R EVLCAVCDAHLGHVF+DGP PTG RYCIN
Sbjct: 70  FWQPLDPNNIRMERDLS-HGMVRTEVLCAVCDAHLGHVFEDGPPPTGLRYCIN 121

[Close]

BLAST of MS021218 vs. ExPASy Swiss-Prot
Match: B0BYW4 (Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=msrB PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.8e-39
Identity = 74/116 (63.79%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 77  SNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTG 136
           +  EW+ +LT EQF +TR  GTERAFTGEY + K  GTY C+CC T LF S TKFDSGTG
Sbjct: 7   TEQEWEAQLTPEQFRVTRHHGTERAFTGEYHDLKAAGTYQCVCCGTELFTSDTKFDSGTG 66

Query: 137 WPSYYQPVG-DNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTGKRYCIN 192
           WPS++ P    +V+ K D S +FM R EVLCAVCDAHLGHVF+DGP PTG RYC+N
Sbjct: 67  WPSFWAPADKTHVEEKTDRS-LFMVRTEVLCAVCDAHLGHVFNDGPKPTGLRYCMN 121

[Close]

BLAST of MS021218 vs. ExPASy Swiss-Prot
Match: A6V3R3 (Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas aeruginosa (strain PA7) OX=381754 GN=msrB PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 71/113 (62.83%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 79  DEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGWP 138
           D W++ LT+EQF I R  GTERAF+GEY  TKTPG YHC CC T LF+S  K+DSG+GWP
Sbjct: 9   DSWREELTEEQFHICRLGGTERAFSGEYHATKTPGVYHCTCCGTALFDSDAKYDSGSGWP 68

Query: 139 SYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTGKRYCIN 192
           SY+QPV      +LD     M R EV C  CDAHLGHVF DGP PTG RYCIN
Sbjct: 69  SYFQPVDGEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDGPRPTGLRYCIN 121

[Close]

BLAST of MS021218 vs. ExPASy TrEMBL
Match: A0A6J1BQM8 (Peptide-methionine (R)-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC111004855 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.0e-103
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGV 63
           MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDG+
Sbjct: 1   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGI 60

Query: 64  REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT 123
           REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT
Sbjct: 61  REAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTT 120

Query: 124 LFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP 183
           LFESSTKFDSGTGWPSYYQPV DNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP
Sbjct: 121 LFESSTKFDSGTGWPSYYQPVRDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAP 180

Query: 184 TGKRYCIN 192
           TGKRYCIN
Sbjct: 181 TGKRYCIN 188

[Close]

BLAST of MS021218 vs. ExPASy TrEMBL
Match: A0A6J1FBY9 (Peptide-methionine (R)-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111442706 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.3e-84
Identity = 158/191 (82.72%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNSSKTQQGFKIIFVSSP-SFRAPK--KLSSSFVRAMGSSSSSQRP 63
           MA+RS +LSIP+GF+NSSKTQQ FK + + SP  FRAPK  KLSSS +RAMGSSSSSQRP
Sbjct: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 60

Query: 64  DGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICC 123
           DG+R  EA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  DGIR--EAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120

Query: 124 DTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDG 183
           +T LFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVFDDG
Sbjct: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180

Query: 184 PAPTGKRYCIN 192
           P PTGKRYCIN
Sbjct: 181 PPPTGKRYCIN 189

[Close]

BLAST of MS021218 vs. ExPASy TrEMBL
Match: A0A1S3BUL6 (Peptide-methionine (R)-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103493463 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.3e-80
Identity = 156/195 (80.00%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   VSAMAARSSSLSI-PTGFLNSSKTQQGFKII-FVSSPSFRA--PKKLSSSFVRAMGSSSS 60
           +S MAARS +LSI PTGF+++SKTQQ F  + F S P FRA   KKLSS   R MGSSSS
Sbjct: 1   MSTMAARSLNLSILPTGFISTSKTQQSFNFLSFSSPPGFRAIKNKKLSSFSTRVMGSSSS 60

Query: 61  SQRPDGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYH 120
           SQ+PDG++  EA T DYKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKT G YH
Sbjct: 61  SQKPDGIK--EAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYH 120

Query: 121 CICCDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHV 180
           CICCDT LFESSTKFDSGTGWPSYYQP+GDNVKSKLDLSIIFMPREEVLCAVCDAHLGHV
Sbjct: 121 CICCDTPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHV 180

Query: 181 FDDGPAPTGKRYCIN 192
           FDDGP PTGKRYCIN
Sbjct: 181 FDDGPPPTGKRYCIN 193

[Close]

BLAST of MS021218 vs. ExPASy TrEMBL
Match: A0A0A0L4I4 (Peptide-methionine (R)-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_4G622800 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.0e-78
Identity = 156/196 (79.59%), Postives = 170/196 (86.73%), Query Frame = 0


Query: 1   VSAMAARSSSLS-IPTGFLNSSKTQQGFKII-FVSSPSFRA--PKKLSSSFVRAMG-SSS 60
           +S MAARS +LS +PTGF+++SKTQQ F  + F S PSFRA   KKLSSS  R MG SSS
Sbjct: 1   MSTMAARSLNLSFLPTGFISTSKTQQSFNFVSFSSPPSFRAIKNKKLSSSSTRVMGCSSS 60

Query: 61  SSQRPDGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTY 120
           SSQ+PDG++  EA T +YKS+S+DEWKKRLT EQF ITRQKGTERAFTGEYWNTKT G Y
Sbjct: 61  SSQKPDGIK--EAGTVNYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGIY 120

Query: 121 HCICCDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGH 180
           HCICCDT LFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGH
Sbjct: 121 HCICCDTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGH 180

Query: 181 VFDDGPAPTGKRYCIN 192
           VF+DGP PTGKRYCIN
Sbjct: 181 VFNDGPPPTGKRYCIN 194

[Close]

BLAST of MS021218 vs. ExPASy TrEMBL
Match: A0A067D491 (Peptide-methionine (R)-S-oxide reductase OS=Citrus sinensis OX=2711 GN=CISIN_1g028408mg PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 142/192 (73.96%), Postives = 161/192 (83.85%), Query Frame = 0


Query: 4   MAARSSSLSIPTGFLNS--SKTQQGFKI-IFVS-SPSFRAPKKLSSSFVRAMGSSSSSQR 63
           MA   S +SIPT    S  S+ + G K  +FVS SPS R PK++S S +RAMGSS+SSQ+
Sbjct: 3   MAISHSLMSIPTAMHISTLSQFESGVKSKLFVSASPSLRRPKRVSLSVIRAMGSSASSQK 62

Query: 64  PDGVREAEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCIC 123
           PD ++  EA+  DY SIS++EWK+RLT EQ+ ITRQKGTERAFTGEYWNTKTPGTYHCIC
Sbjct: 63  PDNIQ--EANRVDYASISDEEWKRRLTGEQYYITRQKGTERAFTGEYWNTKTPGTYHCIC 122

Query: 124 CDTTLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDD 183
           CDT LFESSTKFDSGTGWPSYYQP+G N+KSKLDLSIIFMPR+EVLCAVCDAHLGHVFDD
Sbjct: 123 CDTPLFESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDD 182

Query: 184 GPAPTGKRYCIN 192
           GP PTGKRYCIN
Sbjct: 183 GPPPTGKRYCIN 192

[Close]

BLAST of MS021218 vs. TAIR 10
Match: AT1G53670.1 (methionine sulfoxide reductase B 1 )

HSP 1 Score: 247.7 bits (631), Expect = 7.7e-66
Identity = 125/186 (67.20%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 7   RSSSLSIPTGFLNSSKT-QQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGVRE 66
           +SS +S  T     SKT   GF     +  S   P+ LS S V +MGSSSSS +PD V+E
Sbjct: 11  QSSFVSARTRLNYVSKTNHSGF-----ACRSLSKPRNLSLS-VYSMGSSSSSPKPDNVQE 70

Query: 67  AEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLF 126
           AE +  ++ S+S +EWKKRLT EQ+ ITRQKGTERAFTGEYWN+KTPG Y+C+CCDT LF
Sbjct: 71  AEKN--EFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLF 130

Query: 127 ESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTG 186
           +SSTKFDSGTGWPSYYQP+G+NVK+KLDLSIIFMPR+EV+CAVC+AHLGHVFDDGP PTG
Sbjct: 131 DSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPRPTG 188

Query: 187 KRYCIN 192
           KRYC+N
Sbjct: 191 KRYCLN 188

[Close]

BLAST of MS021218 vs. TAIR 10
Match: AT1G53670.2 (methionine sulfoxide reductase B 1 )

HSP 1 Score: 227.6 bits (579), Expect = 8.2e-60
Identity = 118/186 (63.44%), Postives = 142/186 (76.34%), Query Frame = 0


Query: 7   RSSSLSIPTGFLNSSKT-QQGFKIIFVSSPSFRAPKKLSSSFVRAMGSSSSSQRPDGVRE 66
           +SS +S  T     SKT   GF     +  S   P+ LS S V +MGSSSSS +PD V+E
Sbjct: 11  QSSFVSARTRLNYVSKTNHSGF-----ACRSLSKPRNLSLS-VYSMGSSSSSPKPDNVQE 70

Query: 67  AEADTTDYKSISNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLF 126
           AE +  ++ S+S +EWKKRLT EQ+ ITRQKGTERAFTGEYWN+KTPG Y+C+CCDT LF
Sbjct: 71  AEKN--EFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLF 130

Query: 127 ESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGPAPTG 186
           +       GTGWPSYYQP+G+NVK+KLDLSIIFMPR+EV+CAVC+AHLGHVFDDGP PTG
Sbjct: 131 D-------GTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPRPTG 181

Query: 187 KRYCIN 192
           KRYC+N
Sbjct: 191 KRYCLN 181

[Close]

BLAST of MS021218 vs. TAIR 10
Match: AT4G21840.1 (methionine sulfoxide reductase B8 )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 78  NDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGW 137
           ++EW+  L+ EQF + R KGT++   GE+      GTY C  C T L++S+TKFDSG GW
Sbjct: 18  DEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGW 77

Query: 138 PSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPAPTGKRYCIN 192
           P+++  +   +K   +       R E+ CAVCD HLGHVF  +    PT +R+C+N
Sbjct: 78  PAFFDAIPGAIKQTPEAG---GRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVN 130

[Close]

BLAST of MS021218 vs. TAIR 10
Match: AT4G21830.1 (methionine sulfoxide reductase B7 )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 78  NDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTGW 137
           ++EW+  L+ EQF + R KGT++   GE+      GTY C  C T L++S+TKFDSG GW
Sbjct: 19  DEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGW 78

Query: 138 PSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPAPTGKRYCIN 192
           P+++  +   +K   +       R E+ CAVCD HLGHVF  +    PT +R+C+N
Sbjct: 79  PAFFDAIPGAIKQTPEAG---GRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVN 131

[Close]

BLAST of MS021218 vs. TAIR 10
Match: AT4G04830.1 (methionine sulfoxide reductase B5 )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 77  SNDEWKKRLTKEQFDITRQKGTERAFTGEYWNTKTPGTYHCICCDTTLFESSTKFDSGTG 136
           + +EW+  L+ EQF I RQKGTE+  TGEY      G + C+ C T L++S+TKFDSG G
Sbjct: 11  TEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCG 70

Query: 137 WPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVF--DDGPAPTGKRYCIN 192
           WP++++ +   +    D       R E+ CA CD HLGHVF  +    PT +R+C+N
Sbjct: 71  WPAFFEGLPGAINRTPDPD---GRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVN 124

The following BLAST results are available for this feature:

BLAST of MS021218 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131780.1	1.6e-102	98.94	peptide methionine sulfoxide reductase B1, chloroplastic [Momordica charantia]	[more]
XP_022935958.1	1.3e-83	82.72	peptide methionine sulfoxide reductase B1, chloroplastic [Cucurbita moschata]	[more]
XP_038898315.1	2.9e-83	81.59	peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Benincasa h...	[more]
KAG6591779.1	2.9e-83	82.20	Peptide methionine sulfoxide reductase B1, chloroplastic, partial [Cucurbita arg...	[more]
KAG7024657.1	3.8e-83	82.20	Peptide methionine sulfoxide reductase B1, chloroplastic [Cucurbita argyrosperma...	[more]

BLAST of MS021218 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8M2	1.1e-64	67.20	Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana...	[more]
Q0DC89	2.7e-63	75.82	Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. ...	[more]
Q8DJK9	1.1e-40	66.37	Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (st...	[more]
B0BYW4	7.8e-39	63.79	Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC...	[more]
A6V3R3	1.1e-37	62.83	Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas aeruginosa (strain PA...	[more]

BLAST of MS021218 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQM8	8.0e-103	98.94	Peptide-methionine (R)-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FBY9	6.3e-84	82.72	Peptide-methionine (R)-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3BUL6	4.3e-80	80.00	Peptide-methionine (R)-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103493463...	[more]
A0A0A0L4I4	1.0e-78	79.59	Peptide-methionine (R)-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_4G622...	[more]
A0A067D491	1.1e-72	73.96	Peptide-methionine (R)-S-oxide reductase OS=Citrus sinensis OX=2711 GN=CISIN_1g0...	[more]

BLAST of MS021218 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53670.1	7.7e-66	67.20	methionine sulfoxide reductase B 1	[more]
AT1G53670.2	8.2e-60	63.44	methionine sulfoxide reductase B 1	[more]
AT4G21840.1	1.1e-22	41.38	methionine sulfoxide reductase B8	[more]
AT4G21830.1	1.1e-22	41.38	methionine sulfoxide reductase B7	[more]
AT4G04830.1	1.1e-22	42.74	methionine sulfoxide reductase B5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002579	Peptide methionine sulphoxide reductase MrsB	PFAM	PF01641	SelR	coord: 80..191 e-value: 6.4E-48 score: 161.7
IPR002579	Peptide methionine sulphoxide reductase MrsB	TIGRFAM	TIGR00357	TIGR00357	coord: 77..191 e-value: 1.2E-50 score: 169.0
IPR002579	Peptide methionine sulphoxide reductase MrsB	PROSITE	PS51790	MSRB	coord: 78..191 score: 66.112274
None	No IPR available	GENE3D	2.170.150.20	Peptide methionine sulfoxide reductase.	coord: 57..191 e-value: 9.5E-54 score: 183.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71
None	No IPR available	PANTHER	PTHR10173:SF52	METHIONINE-R-SULFOXIDE REDUCTASE B1	coord: 39..191
IPR028427	Peptide methionine sulfoxide reductase	PANTHER	PTHR10173	METHIONINE SULFOXIDE REDUCTASE	coord: 39..191
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 76..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS021218.1	MS021218.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030091	protein repair
biological_process	GO:0006979	response to oxidative stress
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0033743	peptide-methionine (R)-S-oxide reductase activity