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MS021184 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCTTCCATGGCCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCGAACCAGAAACCCCACTTTCACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTCGCTGTAGAAACCGCCGTCCAACCGAAGGATCCGGAGCCGGAAGAGCAGGAGAGCCTCGCTGCCGGTGCTAATTGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTCAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGATTTGACTCAGTTTCGGAAAGATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGGTAAGAACCCTAAATTCACATGGTGAATCAACAATTCCTTCGTAATCCGGACGAACCCTTAATTCTCTGTTGAATTTCTTTCTAATTGAATAGCTGAATCTAGACAACTTGTGGGGATACATTTGAAATTTGAGTAGAAGATTGCAAAGTTGCATGCAATGTCTGAAATGATTTTGATTCTGCAAGTTTTGATGGTGTTCAAATATCAAATTGTTTGTAATTTTTTCTTGGTGATACTTGAGCAATTACTTGATTTTCCATCAGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGACCCTGTAGTATTTGAATCATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGTATGATCATAACATGTTTTTGTAATTGCTTTATCTTGCTTTCTCGAAGCTTGTTTGAGAAAAATAATGTTAAAACATCTGTGTACTGTACACTTGTTTTCTGGAAGTTGTTTTTTTATCTTGTTTCCATTTGGTAAGTTCTCATGGATGACATGTTTTTTCAGATGAAGTTCCTTCTTCAAATTTGTAAATCTTGGCTTCAATGTATGCTATAACGTTGGCTTTCATAAGCCATTTTATCACAATTCTCATGAACAATTTTGAAACAAGAACGAAAAACTATTTTGAATATGGTTTTCAGAACAAGTCCTTTGGTCCTGTTTGATACCATTTTATTTTGGTTTTCTGTTTTTAAAAATTAAGCTTAGAAAGATTACTTTCACCTATGTGTTCATCTGTTTTTGTTATATAACTTTTGTAAACATTTTCAAAATCTAGGCAAAATTTTGCATACAAGGAAAAATAGTTTTTGTTTTTTAAATTTGGTTTTATAATTCAAATATGTTTTCAAAAGAGATAAAAAATTTACTAATGAAACTGTAAAAAAACAAACATAATTTTTAAAAACATAACTAAAAGCGAAATGATTATCATAACTAAAAGCGAAATGATTATCAGACGACAACTTAGTTTTTATCAAAATCTTAAACTTCAATTTGCACTTAGTTTTGCATAGAAAAATTTGCAAGTTTGTGAACGAATCATTTGCCAGTAATAAAGTGATGAGTAAAGTATCGTATGTACCATAATGTCATGAAGTGTGGAATGGTTTTCGATGCAGGCCGTGCGGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATAGAGACTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGTAATATAGAACATAGTTGTCTTGTCTGTTCTTGTTTTTAATTAATTTATGTTTGTGTTCTGTAAGAATTGAGCTAAGTAGAGAAGGAGGATAATATGTGAGCTCTGAAAGATATTGAATTTTAGGCCTCAGAGTTTTATTAATGTTAGGATTTCTTTCTTCAATGAAAATGTCTCTCTATAATTATTGGTTTTTCTGGAAATATGATTGACAGGGTTCATATTTTCTGATGAACTTTATCAGAATACCAAAATCCAGTTTGAATTTGATTTATGTTCATATATATATTTATATGGGTAATTATATTTGTTTGTTCTTGAATTTTAAGTTATTATGATTTAGATCTCAGGAGTTTTAAAAAATAATTCAAAATGGTCTCTATCATTTCATTAATTTTCAAAATCTTCCATTAGTTCATGATAAGCTACTTTGACATAAAAGATATGTATTTTTGTCTTGATACGCGACTGTCCTTCTACATTTAAAAAATCTTTATTTGTAAAATTTTAACTTAAATTTTATACACTAGAAAAAATTATATTTCAAGAAATTTAATATGTGAAGTATAATGGCTAAATTGAACTAAAGCGAGTCGAGTTCAGCGGTAATTGACATATAAAAAATACGGAGAATAAAATAATATTTAATCCTATATAATTTATTGTTATTAATTATATATATATTTTTAATGTTGTTAGAACCATATATAATTTTTTTGATTCTTTTTTAATACAACAAGTGTAGGGACCGGATATTAAGTCTCCAAATTTTAAGTAGGGTGTCTTAACTGAGCTAACGATATATAATTAATTATACATTTTTAAGATGATATGATAAAAATAATTAAAATTATACATAAATATATTCCCCTTTCCACCTTTTGAAGGTGTGAACCAAATTTGAATTAAATCAATTCTTAATAACATTTAGGGGAAATACACTTATAATCAAAGTACTCATGATAAAATACCTTATTTAAAAAATATTCTTGAACATATTTAGTAAAAGGTGTTTAATGTTTTCTTAAAAAAAAAAAAGGGTGTTTAATGACAAATTTAGTGCTTTTTTGACAAGTATTTAGGGTGTGTTTGGAAGTGATAGTAAACGATAGTATGAGATTTAATTATAATTGATTTTCTAAAATACCATCCAAGTGAACCGTAAAAATAAATTTAAAGTGATTTTAAACTTTCCTAATCAATTTTTTAATTTGTCAAACATGATCAACAGAAAGGAAAATGATTTTGACAATAGTGAAAGCAATTTTGGTGGGCCAAAATTACTCAAAAACACACCCTAAATCGCTTATTTCAAAACTACTCCCAGATACATTTTTAATGTGTAATTTTAGCTGATTCTCAAATACAAACCCATCACCACTTGTTTAATCCTCTCCATGTCTGGTGGAGAGATGAAGATTGAAATGGTGATATATAATATTGTATGTATATTTCACCTTGTGTGTATCGCCATGCCTTGTATTTATTTATTGTACATATCACTTTGTATGTGTCACCACAACACATATTTGTATATGTATATATATATAGGTTAAATATTAGTTTGATCAATATACTTTTTGGCTTTGGTTCACTTTAGTTCATAATTTTAACCCGTTCATTTTGGTTCTTGTACTTTCAACTTTTGTTTATCTTAACATTGTACTTTTAAAAAGCGACTAATTTAATCTTTATTTGTAAAATTTGAATAGAGTTTATACACAAGAAAAACTTGTACACAAATTTATGGTTACATTATAAGAAATTAAGTTAATGAAGTGTCTGTTAAAATTATGATAAAAATGAGATAAAAAAATGAAGAGACCAAAATGGTCACTTTTTAAAAGTATAGGGACCAAAACGAGTGTTTCAAGAGTATATGGATTAAAATGAAATGACCATAATGAACCAAAATCGAAAGTACATTGGCCAAAATAGTATTTAAACCATAAATATAAATGTACACAAGGTGATACATACTAGGTGATACAGCTATATATATATATAAAGTAATATATCTATCCATATCTATATACGAATATATGTATATAATTTCATAATCTCACAAATACATACAAGGAGAGAAGACTTGAGAATTATAAGTTCATCTAGCTCAGGCTCAAGCTCTATCCAGTCAACTGAAATGGTGAACTCTCTCTTTATTTCTCTGTAACTCAAGGTCTGTGTTCTGACATGGTGTGGTGAAATTTGTGATAATTTTAGGCAAGGGTCTCAAAAGATAACAAAGTGGTGGTGACTGTGTATTCAGAGAGGCAAGAAACAAGGCTAGCAGTAAACCGTTACCAGCGCGACGACGCGAACAAAGCAGTGAGAAATCAGTGGAAGCAAGACATACCTAGTAAAGGATACAATAGGAGAGCTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAATTCTGCACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCAAACACCAGAGCCGACTTCCTTAAAGAACAAGCAACCAATTGCAAGAAACATAGCAATTAATCTTGCATGCTCTTCCTTTTCTGTAAGTTTGCATATTGATTTACAAAGCAATCACATTTATCTTTTTGTCCTAGCAAGA TCCTCTTCCATGGCCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCGAACCAGAAACCCCACTTTCACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTCGCTGTAGAAACCGCCGTCCAACCGAAGGATCCGGAGCCGGAAGAGCAGGAGAGCCTCGCTGCCGGTGCTAATTGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTCAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGATTTGACTCAGTTTCGGAAAGATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGACCCTGTAGTATTTGAATCATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGCCGTGCGGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATAGAGACTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGGTCTCAAAAGATAACAAAGTGGTGGTGACTGTGTATTCAGAGAGGCAAGAAACAAGGCTAGCAGTAAACCGTTACCAGCGCGACGACGCGAACAAAGCAGTGAGAAATCAGTGGAAGCAAGACATACCTAGTAAAGGATACAATAGGAGAGCTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAATTCTGCACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCAAACACCAGAGCCGACTTCCTTAAAGAACAAGCAACCAATTGCAAGAAACATAGCAATTAATCTTGCATGCTCTTCCTTTTCTGTAAGTTTGCATATTGATTTACAAAGCAATCACATTTATCTTTTTGTCCTAGCAAGA TCCTCTTCCATGGCCTTGTTTTCTCCTCCATCCCATTTCTCTACGCTCTCTCCCTCTTCGACCCACAGAACCCACTTCTCCTTCACGGCCTTCCCATCTCTCCGAACCAGAAACCCCACTTTCACCACCATCAGGGCCGCTGCTGACAATGGCGCCGGAATTTCAGCTGCCGTCGCTGTAGAAACCGCCGTCCAACCGAAGGATCCGGAGCCGGAAGAGCAGGAGAGCCTCGCTGCCGGTGCTAATTGGTCCGTGGCGGCTGCCGAAGAAGTGGAGGTGGTCAGCAAATTTGAAGACCCCAAGTGGGTTAATGGGACTTGGGATTTGACTCAGTTTCGGAAAGATGGAAGTACCGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAAATGGCTGGAAAACAATCCAGAATCATCAAGCAATGAAGACCCTGTAGTATTTGAATCATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTGAGCTACTCAATGGCCGTGCGGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGACTGGGGTGGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACTTTGTTATTTGTAGCTGTGGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATAGAGACTATAAAGAGGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACCTCAGCCAAAAAGGTCTCAAAAGATAACAAAGTGGTGGTGACTGTGTATTCAGAGAGGCAAGAAACAAGGCTAGCAGTAAACCGTTACCAGCGCGACGACGCGAACAAAGCAGTGAGAAATCAGTGGAAGCAAGACATACCTAGTAAAGGATACAATAGGAGAGCTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAATTCTGCACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCGAACACGATCACCTGCATCACCATATATCCAAACACCAGAGCCGACTTCCTTAAAGAACAAGCAACCAATTGCAAGAAACATAGCAATTAATCTTGCATGCTCTTCCTTTTCTGTAAGTTTGCATATTGATTTACAAAGCAATCACATTTATCTTTTTGTCCTAGCAAGA SSSMALFSPPSHFSTLSPSSTHRTHFSFTAFPSLRTRNPTFTTIRAAADNGAGISAAVAVETAVQPKDPEPEEQESLAAGANWSVAAAEEVEVVSKFEDPKWVNGTWDLTQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFESSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETIKRLIDETTFYDKQWQATWQDETSAKKVSKDNKVVVTVYSERQETRLAVNRYQRDDANKAVRNQWKQDIPSKGYNRRAELLKYSQRLRNSARSPASPYIRTRSPASPYIRTRSPASPYIQTPEPTSLKNKQPIARNIAINLACSSFSVSLHIDLQSNHIYLFVLAR Homology
BLAST of MS021184 vs. NCBI nr
Match: KAA0041046.1 (uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa] >TYK12056.1 uncharacterized protein E5676_scaffold1017G00700 [Cucumis melo var. makuwa]) HSP 1 Score: 547.0 bits (1408), Expect = 1.3e-151 Identity = 301/395 (76.20%), Postives = 320/395 (81.01%), Query Frame = 0
BLAST of MS021184 vs. NCBI nr
Match: XP_022155552.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia]) HSP 1 Score: 496.5 bits (1277), Expect = 2.1e-136 Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of MS021184 vs. NCBI nr
Match: XP_038906355.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 424.5 bits (1090), Expect = 1.0e-114 Identity = 222/259 (85.71%), Postives = 233/259 (89.96%), Query Frame = 0
BLAST of MS021184 vs. NCBI nr
Match: XP_008448777.1 (PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]) HSP 1 Score: 415.2 bits (1066), Expect = 6.1e-112 Identity = 220/259 (84.94%), Postives = 231/259 (89.19%), Query Frame = 0
BLAST of MS021184 vs. NCBI nr
Match: XP_004147237.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus] >KGN55822.1 hypothetical protein Csa_009505 [Cucumis sativus]) HSP 1 Score: 409.5 bits (1051), Expect = 3.4e-110 Identity = 219/262 (83.59%), Postives = 230/262 (87.79%), Query Frame = 0
BLAST of MS021184 vs. ExPASy Swiss-Prot
Match: Q9SYX1 (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.4e-74 Identity = 152/263 (57.79%), Postives = 185/263 (70.34%), Query Frame = 0
BLAST of MS021184 vs. ExPASy Swiss-Prot
Match: Q6NKS4 (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.3e-72 Identity = 151/263 (57.41%), Postives = 183/263 (69.58%), Query Frame = 0
BLAST of MS021184 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 6.5e-152 Identity = 301/395 (76.20%), Postives = 320/395 (81.01%), Query Frame = 0
BLAST of MS021184 vs. ExPASy TrEMBL
Match: A0A6J1DPN2 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022664 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 1.0e-136 Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of MS021184 vs. ExPASy TrEMBL
Match: A0A1S3BLD8 (uncharacterized protein LOC103490842 OS=Cucumis melo OX=3656 GN=LOC103490842 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 3.0e-112 Identity = 220/259 (84.94%), Postives = 231/259 (89.19%), Query Frame = 0
BLAST of MS021184 vs. ExPASy TrEMBL
Match: A0A0A0L5D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017160 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.6e-110 Identity = 219/262 (83.59%), Postives = 230/262 (87.79%), Query Frame = 0
BLAST of MS021184 vs. ExPASy TrEMBL
Match: A0A6J1HQ78 (light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465096 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.7e-107 Identity = 209/250 (83.60%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of MS021184 vs. TAIR 10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 280.8 bits (717), Expect = 1.7e-75 Identity = 152/263 (57.79%), Postives = 185/263 (70.34%), Query Frame = 0
BLAST of MS021184 vs. TAIR 10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein ) HSP 1 Score: 275.0 bits (702), Expect = 9.2e-74 Identity = 151/263 (57.41%), Postives = 183/263 (69.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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