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MS020868 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCGACGACTCGTTCAACAGTTTGGTGCCCAAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGC GCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCGACGACTCGTTCAACAGTTTGGTGCCCAAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGC GCTTCCACTCCCGGGGACGACGGGAAGTCGTCCCCACGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCGACGACTCGTTCAACAGTTTGGTGCCCAAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGC ASTPGDDGKSSPRGHWRPAEDEKLRRLVQQFGAQNWNSIAEKLQGRSG Homology
BLAST of MS020868 vs. NCBI nr
Match: XP_022153715.1 (transcription factor MYB52-like [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 9.1e-18 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of MS020868 vs. NCBI nr
Match: XP_022936691.1 (transcription factor MYB117-like [Cucurbita moschata]) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MS020868 vs. NCBI nr
Match: KAG6592163.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.8 bits (216), Expect = 2.7e-14 Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MS020868 vs. NCBI nr
Match: XP_022975017.1 (transcription factor CSA-like [Cucurbita maxima]) HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14 Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MS020868 vs. NCBI nr
Match: XP_030465386.1 (transcription factor LAF1-like [Syzygium oleosum]) HSP 1 Score: 85.5 bits (210), Expect = 1.4e-13 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MS020868 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.9e-11 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS020868 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-10 Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of MS020868 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 9.5e-10 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of MS020868 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.2e-09 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of MS020868 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-09 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of MS020868 vs. ExPASy TrEMBL
Match: A0A6J1DHL3 (transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111021169 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.4e-18 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of MS020868 vs. ExPASy TrEMBL
Match: A0A6J1F870 (transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14 Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MS020868 vs. ExPASy TrEMBL
Match: A0A6J1IBV4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14 Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MS020868 vs. ExPASy TrEMBL
Match: K7KUM6 (Uncharacterized protein OS=Glycine max OX=3847 GN=100802283 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13 Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MS020868 vs. ExPASy TrEMBL
Match: A0A059BTH1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02756 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of MS020868 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 ) HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS020868 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 ) HSP 1 Score: 63.2 bits (152), Expect = 6.8e-11 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of MS020868 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 ) HSP 1 Score: 62.8 bits (151), Expect = 8.8e-11 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of MS020868 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 ) HSP 1 Score: 62.8 bits (151), Expect = 8.8e-11 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of MS020868 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 ) HSP 1 Score: 62.4 bits (150), Expect = 1.2e-10 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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