MS020714 (gene) Bitter gourd (TR) v1

Overview


Name	MS020714
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Smr domain-containing protein
Location	scaffold178: 41221 .. 43346 (-)
RNA-Seq Expression	MS020714
Synteny	MS020714

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGTGAGGGGTAAATCCTCTGGATGGGCTGCTGTTAACCTTAAGCAACAGAAGAGAGGGCTTCAAGATGAAATTGAACCCGAACCATTCCCACCAATATCAACTACTCTTTCCTCTCTGCCTCCCCATGGAAATTTGCACAGAGTTGATAGTCGTTCAGGGAGACCTTTCTCATCTGCACTCCTTCCTTCTGCAGATTCTCTAACTTTGCCCGAAACTTCTGGTGCCAAGAAGACAGTACTTGGAGATTCTAGTATTCAAGGTGGAAAGAAGGTGATTGAAGAAATTTTTTTAGCCCTCAGGAAGCTTAAAGAGCTCCATTCTTGGGCTGATTTTCGCTTGATTGAGGATGTAATGGAAGCTGTAAATAATAACATCAACGAGGCTTCTATTTTATTAAAAGCTATGGTTTCTAATGAAACTTTTGAGAACAATAATGAGATGAGCACCTTAGGACTGCATTCCTATAATGATTTATCTTGCAGTGGTAAGAACAATGTGAGTGTACCATTAGAAAAAACTGTTAATATTCCAATCCTCAGTTCCACAATTAAGAATGTGCATCAAAATAATATTGCATGTGATGAAGATGATACAAAATTGATTGAAGATAATTATTGTGAAAGAAATTTCTTTCATAATGTTGGGAATCCAAAACTATCTCTTGGTTGCTCAAATTCCGTTCCTATTGAGCCTGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATATCAATGATAAGGTAAATAAGTCTTCTGTCTACTTAATAATTGAGTTGTTATTCTACTTTAACTTGGTTTGTTTCCCTTAATATGTATTGTTGATAAAATTGTCGTACTAGAAACTTAACTTAGGTTTTCTTTCTTTTCCCTTCATTTTATACTTCTTTTGTATTGTTGTAAATTGTAATTCCACACTATACTTATGGGGTTCTCTGTATTTATTGATTATTTTTACCACGTGTGAGATGAATGTTTTCAAGAATTTATACATATGAGGATCTCTTCTATAGGTGTACCTATGTGTTCTTGAGTTCTAAGGAGGAAAAAAATTATATGTTTGAATAAGCCAACTTTATTTCATGGCTCAAGCTTTTGAGATTAGTAGAAAGGTGACATGTTAAGGACATATTGAGTCCATATCTTGGTCAATTTGTGAAGCTTTTTAATCAAACTAAATTCTGTGATCATTTAGAAGAAATATTAAAAAACTAATGAGTTGACAATTATTTTTGACTTAATGACTTAGACTTTGTTTGATAACCATTTCGTTTTTAGTTTTCTGCTTCTAAAAATTAAACTTAGAATCATTACTTTTGCCTATGCATTCCTTTGTTTTGTTATATAGTTTTTATAAACGTTTTCAAAGTCTAGGCCAAATTTTGAAAACTAAAAAGAGTAGTTTTCAAAAATTTGTTTTGTTTTTTTAAATTTGGCTAAAAATTCAAATATGCTCTCTATAGAGTGGTGAAAATTTACTAATAAAATTGTAAAAAACAAGCATAATTTTCAAAAATAAAAAACAAAAAACGAAATGGTTATCAAATGACACCTTCATCTTTCAAAATTAGTAATTCAATAAATGTGCTAGTGTTGTGCATTTGGTTCTATTCTTGGATGTAGTTTAACATATTTGGTTCTTGGGAGATGGCTCATGCAAGCAATGGTAAAGGAGTTGACGCCTTGCTTAATTTTCTGTAATCAATAGGTCAGCATCTCAACATTCAAGGGCTGCCACTAATGCCTATCTTAGGAAGGACCATATCTCTGCCAAGTATCATTCATCAAGGGCTAAAGAACAATGGCTAGCTGCCAAAATGTTAAATGATAAGGCAGCTAATGAAATTTTACGGACGAGGAATATTAAGAATGGGCTCTGGAAGTTGGACTTACATGGTCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGAACACTTGCTGAAAATTGAAACTCAGAATGCCTCAAATCGATCATTGTCGCCAAAGAAAACCGAAAGGAAAGGGTTCTGGCGTGCTTCATCCCTTGAGTCTCTGAATTGTATAGACTCAAAGTTGGACAAAGAATCGACATCATCTAGGCATAGGCCGACATTATTGGAAGTTATAACAGGT

mRNA sequence

TGGGTGAGGGGTAAATCCTCTGGATGGGCTGCTGTTAACCTTAAGCAACAGAAGAGAGGGCTTCAAGATGAAATTGAACCCGAACCATTCCCACCAATATCAACTACTCTTTCCTCTCTGCCTCCCCATGGAAATTTGCACAGAGTTGATAGTCGTTCAGGGAGACCTTTCTCATCTGCACTCCTTCCTTCTGCAGATTCTCTAACTTTGCCCGAAACTTCTGGTGCCAAGAAGACAGTACTTGGAGATTCTAGTATTCAAGGTGGAAAGAAGGTGATTGAAGAAATTTTTTTAGCCCTCAGGAAGCTTAAAGAGCTCCATTCTTGGGCTGATTTTCGCTTGATTGAGGATGTAATGGAAGCTGTAAATAATAACATCAACGAGGCTTCTATTTTATTAAAAGCTATGGTTTCTAATGAAACTTTTGAGAACAATAATGAGATGAGCACCTTAGGACTGCATTCCTATAATGATTTATCTTGCAGTGGTAAGAACAATGTGAGTGTACCATTAGAAAAAACTGTTAATATTCCAATCCTCAGTTCCACAATTAAGAATGTGCATCAAAATAATATTGCATGTGATGAAGATGATACAAAATTGATTGAAGATAATTATTGTGAAAGAAATTTCTTTCATAATGTTGGGAATCCAAAACTATCTCTTGGTTGCTCAAATTCCGTTCCTATTGAGCCTGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATATCAATGATAAGGTCAGCATCTCAACATTCAAGGGCTGCCACTAATGCCTATCTTAGGAAGGACCATATCTCTGCCAAGTATCATTCATCAAGGGCTAAAGAACAATGGCTAGCTGCCAAAATGTTAAATGATAAGGCAGCTAATGAAATTTTACGGACGAGGAATATTAAGAATGGGCTCTGGAAGTTGGACTTACATGGTCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGAACACTTGCTGAAAATTGAAACTCAGAATGCCTCAAATCGATCATTGTCGCCAAAGAAAACCGAAAGGAAAGGGTTCTGGCGTGCTTCATCCCTTGAGTCTCTGAATTGTATAGACTCAAAGTTGGACAAAGAATCGACATCATCTAGGCATAGGCCGACATTATTGGAAGTTATAACAGGT

Coding sequence (CDS)

TGGGTGAGGGGTAAATCCTCTGGATGGGCTGCTGTTAACCTTAAGCAACAGAAGAGAGGGCTTCAAGATGAAATTGAACCCGAACCATTCCCACCAATATCAACTACTCTTTCCTCTCTGCCTCCCCATGGAAATTTGCACAGAGTTGATAGTCGTTCAGGGAGACCTTTCTCATCTGCACTCCTTCCTTCTGCAGATTCTCTAACTTTGCCCGAAACTTCTGGTGCCAAGAAGACAGTACTTGGAGATTCTAGTATTCAAGGTGGAAAGAAGGTGATTGAAGAAATTTTTTTAGCCCTCAGGAAGCTTAAAGAGCTCCATTCTTGGGCTGATTTTCGCTTGATTGAGGATGTAATGGAAGCTGTAAATAATAACATCAACGAGGCTTCTATTTTATTAAAAGCTATGGTTTCTAATGAAACTTTTGAGAACAATAATGAGATGAGCACCTTAGGACTGCATTCCTATAATGATTTATCTTGCAGTGGTAAGAACAATGTGAGTGTACCATTAGAAAAAACTGTTAATATTCCAATCCTCAGTTCCACAATTAAGAATGTGCATCAAAATAATATTGCATGTGATGAAGATGATACAAAATTGATTGAAGATAATTATTGTGAAAGAAATTTCTTTCATAATGTTGGGAATCCAAAACTATCTCTTGGTTGCTCAAATTCCGTTCCTATTGAGCCTGAGTGGGAAGAAGATGATATTTACCTGAGCCATCGGAAAGATGCTATATCAATGATAAGGTCAGCATCTCAACATTCAAGGGCTGCCACTAATGCCTATCTTAGGAAGGACCATATCTCTGCCAAGTATCATTCATCAAGGGCTAAAGAACAATGGCTAGCTGCCAAAATGTTAAATGATAAGGCAGCTAATGAAATTTTACGGACGAGGAATATTAAGAATGGGCTCTGGAAGTTGGACTTACATGGTCTTCATGCAGCAGAGGCTGTTCAAGCCTTGCAAGAACACTTGCTGAAAATTGAAACTCAGAATGCCTCAAATCGATCATTGTCGCCAAAGAAAACCGAAAGGAAAGGGTTCTGGCGTGCTTCATCCCTTGAGTCTCTGAATTGTATAGACTCAAAGTTGGACAAAGAATCGACATCATCTAGGCATAGGCCGACATTATTGGAAGTTATAACAGGT

Protein sequence

WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSALLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVMEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIPILSSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLESLNCIDSKLDKESTSSRHRPTLLEVITG

Homology

[Close]

BLAST of MS020714 vs. NCBI nr
Match: XP_022143556.1 (uncharacterized protein LOC111013424 [Momordica charantia])

HSP 1 Score: 760.0 bits (1961), Expect = 1.0e-215
Identity = 384/387 (99.22%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA
Sbjct: 3   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 62

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME 120
           LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME
Sbjct: 63  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME 122

Query: 121 AVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIPIL 180
           AVNNNINEASILLKAMVSNETFENNNEMSTLG HSYND+SCSGKNNVSVPLEKTVNIPIL
Sbjct: 123 AVNNNINEASILLKAMVSNETFENNNEMSTLGPHSYNDISCSGKNNVSVPLEKTVNIPIL 182

Query: 181 SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY 240
           SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY
Sbjct: 183 SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY 242

Query: 241 LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR 300
           LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR
Sbjct: 243 LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR 302

Query: 301 TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES 360
           TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES
Sbjct: 303 TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES 362

Query: 361 LNCIDSKLDKESTSSRHRPTLLEVITG 388
           LNCIDSKLDKESTSSRHRP LLEVITG
Sbjct: 363 LNCIDSKLDKESTSSRHRPRLLEVITG 389

[Close]

BLAST of MS020714 vs. NCBI nr
Match: XP_004148966.1 (uncharacterized protein LOC101223137 [Cucumis sativus] >XP_011659246.1 uncharacterized protein LOC101223137 [Cucumis sativus] >KGN44726.1 hypothetical protein Csa_015697 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 9.2e-153
Identity = 285/392 (72.70%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NLKQ  +GLQDE++ E FPP+ T  SSLPP+ NLH V  RSGR F+S 
Sbjct: 175 WMAGKSPGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPS DSLT PE  GAK T+  DSSIQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSVDSLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLHS NDL C+G N+VS+  E+ +N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILSST+K    +HQNN    ED TKL  ++Y ERN FHN GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSSTVKAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDIYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQAL +HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C++SKLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMESKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. NCBI nr
Match: XP_038898473.1 (uncharacterized protein LOC120086100 [Benincasa hispida])

HSP 1 Score: 550.1 bits (1416), Expect = 1.6e-152
Identity = 292/392 (74.49%), Postives = 321/392 (81.89%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           WV G   GW   NLKQ  RGLQDE + EP PP+ T  SSLPP  +LHRV   SG+ FSS 
Sbjct: 175 WVTGNYPGWEEFNLKQHNRGLQDETDLEPLPPMLTGHSSLPPCESLHRVYGCSGKSFSSV 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIF--LALRKLKELHSWADFRLIEDV 120
              SADSLT PE  GAKKT+  DSSIQ GKKV+EE    LA  KLKELHSWADF LI D+
Sbjct: 235 PRASADSLTSPENYGAKKTIPDDSSIQSGKKVVEESADGLAFWKLKELHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           MEAVNNN NEAS LLK MVS++ F+ N+EMSTL L S NDL C+GKN+VS  LE+T NIP
Sbjct: 295 MEAVNNNFNEASTLLKTMVSSDNFDINDEMSTLVLDSANDLLCNGKNDVSTSLERTANIP 354

Query: 181 ILSSTIKN---VHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           I SST+K+   VHQNN AC+E+ TKL E+NY ERNFFHN G PK+ LG S SVPIEPEWE
Sbjct: 355 IPSSTLKDVQGVHQNNNACEENYTKLFENNYFERNFFHNAGYPKIGLGLSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSRAATNAYLRKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDIYLSHRKDAIAMMRSASQHSRAATNAYLRKDHASAKYHSSRAQEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQALQEHLLKIET+NASNRSLSPKK+ERKGF  A
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALQEHLLKIETRNASNRSLSPKKSERKGFQCA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C+DSK+DKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMDSKVDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. NCBI nr
Match: XP_008451240.1 (PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo] >XP_008451241.1 PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 4.7e-149
Identity = 282/392 (71.94%), Postives = 317/392 (80.87%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NL+Q  RGLQ E +PE FPP+ T   SLPP+ NLH V  R GR F+S 
Sbjct: 175 WMMGKSPGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGRLGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPSADSLT P   GAK T+  DS IQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSADSLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLHS NDL C+G N+VS+  E+T+N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGDNDVSISSERTINGP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILS T+K    +HQN+    ED TKL  ++Y ERNFF N GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSPTLKAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDIYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQALQ+HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C+D+KLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMDAKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. NCBI nr
Match: KAA0059625.1 (Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK08158.1 Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 535.0 bits (1377), Expect = 5.2e-148
Identity = 280/392 (71.43%), Postives = 315/392 (80.36%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NL+Q  RGLQ E +PE FPP+ T   SLPP+ NLH V    GR F+S 
Sbjct: 175 WMMGKSPGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGHLGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPSADSLT P   GAK T+  DS IQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSADSLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLH  NDL C+G N+VS+  E+T+N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHFANDLLCNGDNDVSISSERTINGP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILS T+K    +HQN+    ED TKL  ++Y ERNFF N GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSPTLKAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDD+YLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDVYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQALQ+HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C+DSKLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMDSKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. ExPASy TrEMBL
Match: A0A6J1CQL8 (uncharacterized protein LOC111013424 OS=Momordica charantia OX=3673 GN=LOC111013424 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 4.9e-216
Identity = 384/387 (99.22%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA
Sbjct: 3   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 62

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME 120
           LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME
Sbjct: 63  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEIFLALRKLKELHSWADFRLIEDVME 122

Query: 121 AVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIPIL 180
           AVNNNINEASILLKAMVSNETFENNNEMSTLG HSYND+SCSGKNNVSVPLEKTVNIPIL
Sbjct: 123 AVNNNINEASILLKAMVSNETFENNNEMSTLGPHSYNDISCSGKNNVSVPLEKTVNIPIL 182

Query: 181 SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY 240
           SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY
Sbjct: 183 SSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWEEDDIY 242

Query: 241 LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR 300
           LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR
Sbjct: 243 LSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAANEILR 302

Query: 301 TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES 360
           TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES
Sbjct: 303 TRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRASSLES 362

Query: 361 LNCIDSKLDKESTSSRHRPTLLEVITG 388
           LNCIDSKLDKESTSSRHRP LLEVITG
Sbjct: 363 LNCIDSKLDKESTSSRHRPRLLEVITG 389

[Close]

BLAST of MS020714 vs. ExPASy TrEMBL
Match: A0A0A0KA90 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G374690 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 4.5e-153
Identity = 285/392 (72.70%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NLKQ  +GLQDE++ E FPP+ T  SSLPP+ NLH V  RSGR F+S 
Sbjct: 175 WMAGKSPGWEEFNLKQHNKGLQDEMDLEAFPPMLTNRSSLPPYENLHGVYGRSGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPS DSLT PE  GAK T+  DSSIQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSVDSLTSPENYGAKNTIADDSSIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLHS NDL C+G N+VS+  E+ +N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGNNDVSIASERMINAP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILSST+K    +HQNN    ED TKL  ++Y ERN FHN GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSSTVKAVQGIHQNNNTSREDYTKLFANDYFERNSFHNTGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDIYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAEEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQAL +HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALHDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C++SKLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMESKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. ExPASy TrEMBL
Match: A0A1S3BRS7 (uncharacterized protein LOC103492590 OS=Cucumis melo OX=3656 GN=LOC103492590 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.3e-149
Identity = 282/392 (71.94%), Postives = 317/392 (80.87%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NL+Q  RGLQ E +PE FPP+ T   SLPP+ NLH V  R GR F+S 
Sbjct: 175 WMMGKSPGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGRLGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPSADSLT P   GAK T+  DS IQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSADSLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLHS NDL C+G N+VS+  E+T+N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHSANDLLCNGDNDVSISSERTINGP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILS T+K    +HQN+    ED TKL  ++Y ERNFF N GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSPTLKAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDIYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQALQ+HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C+D+KLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMDAKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. ExPASy TrEMBL
Match: A0A5D3CAF0 (Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00410 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.5e-148
Identity = 280/392 (71.43%), Postives = 315/392 (80.36%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W+ GKS GW   NL+Q  RGLQ E +PE FPP+ T   SLPP+ NLH V    GR F+S 
Sbjct: 175 WMMGKSPGWEEFNLQQHNRGLQGEKDPEAFPPMLTNHPSLPPYENLHGVYGHLGRSFASE 234

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEE--IFLALRKLKELHSWADFRLIEDV 120
            LPSADSLT P   GAK T+  DS IQ GKKV+EE    LA  KLKE+HSWADF LI D+
Sbjct: 235 PLPSADSLTSPGNYGAKNTIPDDSGIQSGKKVVEENTDVLAFWKLKEIHSWADFSLIVDI 294

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           M+AVNNN +EAS LLK MVS++ FE NNE+STLGLH  NDL C+G N+VS+  E+T+N P
Sbjct: 295 MDAVNNNFDEASTLLKTMVSSDNFEINNEISTLGLHFANDLLCNGDNDVSISSERTINGP 354

Query: 181 ILSSTIK---NVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           ILS T+K    +HQN+    ED TKL  ++Y ERNFF N GN K++LGCS SVPIEPEWE
Sbjct: 355 ILSPTLKAAQGMHQNDNTGGEDCTKLFVNDYFERNFFPNAGNSKIALGCSKSVPIEPEWE 414

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDD+YLSHRKDAI+M+RSASQHSRAATNAY RKDH SAKYHSSRA+EQWLAAKMLNDKAA
Sbjct: 415 EDDVYLSHRKDAIAMMRSASQHSRAATNAYRRKDHASAKYHSSRAQEQWLAAKMLNDKAA 474

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN KNGLWKLDLHGLHAAEAVQALQ+HLLKIETQNASNRSLSPKK ERKGF RA
Sbjct: 475 NEILQTRNSKNGLWKLDLHGLHAAEAVQALQDHLLKIETQNASNRSLSPKKAERKGFQRA 534

Query: 361 SSLESLNCIDSKLDKESTSSRHRPTLLEVITG 388
           SSLE L+C+DSKLDKES SSRHRPT LEVITG
Sbjct: 535 SSLEYLSCMDSKLDKESPSSRHRPTSLEVITG 566

[Close]

BLAST of MS020714 vs. ExPASy TrEMBL
Match: A0A6J1JSZ2 (uncharacterized protein LOC111488062 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488062 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 4.3e-148
Identity = 286/394 (72.59%), Postives = 322/394 (81.73%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQQKRGLQDEIEPEPFPPISTTLSSLPPHGNLHRVDSRSGRPFSSA 60
           W RGKS GWAAVNLKQQ  GLQDEI+P+PFPP+ST  S LPP  N+HRV+ RSGR  SS+
Sbjct: 3   WGRGKSPGWAAVNLKQQNSGLQDEIDPDPFPPMSTAHSFLPPCENVHRVNGRSGRSSSSS 62

Query: 61  LLPSADSLTLPETSGAKKTVLGDSSIQGGKKVIEEI--FLALRKLKELHSWADFRLIEDV 120
            LPSADSLTLPE  GAKK +LGDS+IQ G+KV+EE    LA  KLKELH+WADF LI D+
Sbjct: 63  PLPSADSLTLPENYGAKK-ILGDSTIQNGRKVVEETTDVLAFWKLKELHTWADFSLIVDI 122

Query: 121 MEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTVNIP 180
           MEAV+NN NEAS  L  MVS++  E  NEMSTLGLHS + LSC+GKN+V++  E+TVN P
Sbjct: 123 MEAVDNNFNEASTFLNKMVSSDNVEICNEMSTLGLHSADGLSCNGKNDVTISSERTVNNP 182

Query: 181 ILSSTIKNV---HQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEPEWE 240
           I SST+K+V   HQN       + KL E+NY ERNFFHNVGNPK++L CS S PIEPEWE
Sbjct: 183 IPSSTLKDVQDMHQN------INDKLFENNYHERNFFHNVGNPKIALYCSKSAPIEPEWE 242

Query: 241 EDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLNDKAA 300
           EDDIYLSHRKDAI+M+RSASQHSR ATNAYLRKDH SAKYHSSRA+EQWLAAKMLN KAA
Sbjct: 243 EDDIYLSHRKDAIAMMRSASQHSRVATNAYLRKDHASAKYHSSRAQEQWLAAKMLNAKAA 302

Query: 301 NEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERKGFWRA 360
           NEIL+TRN +NGLWKLDLHGLHAAEAVQALQ+HLLKIET NASNRSLSPKK ERKGF+R 
Sbjct: 303 NEILQTRNSENGLWKLDLHGLHAAEAVQALQDHLLKIETWNASNRSLSPKKAERKGFYRV 362

Query: 361 SSLESLNCIDSKLDKE--STSSRHRPTLLEVITG 388
           SSLE L+C+  KLDKE  S   RHRPT LEVITG
Sbjct: 363 SSLEYLSCLGVKLDKELQSPLPRHRPTSLEVITG 389

[Close]

BLAST of MS020714 vs. TAIR 10
Match: AT5G23520.1 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-63
Identity = 161/397 (40.55%), Postives = 224/397 (56.42%), Query Frame = 0


Query: 1   WVRGKSSGWAAVNLKQ-QKRGLQDEIEPEPFPPISTTL-SSLPPHGNLHRVDSRSGRPFS 60
           W++GKSSGW A +LKQ QK+GL+ E+E +PFPP+ST++ +S    G L R    S + FS
Sbjct: 3   WMKGKSSGWTAFDLKQRQKQGLESEVEGDPFPPVSTSVNASFGVRGRLRRNHEPSEKSFS 62

Query: 61  SALLPSADSLTLPETSGAKKTVLGDSSIQGGKKV---IEEIFLALRKLKELHSWADFRLI 120
           S LLP +    L E         G    +    +   +    LA  KLKE++SWAD  LI
Sbjct: 63  SVLLPPSRFPALTENKDCGNQERGGCCRRKPDTLSLPVNSHDLAFTKLKEMNSWADDNLI 122

Query: 121 EDVMEAVNNNINEASILLKAMVSNETFENNNEMSTLGLHSYNDLSCSGKNNVSVPLEKTV 180
            DV+ +  ++   A   LK MVS+      +E  T  +  Y   S   + +     EKTV
Sbjct: 123 RDVLLSTEDDFEMALAFLKGMVSS---GKEDEEPTSKIEGY---SSDNRRSEYRTFEKTV 182

Query: 181 NIPI---LSSTIKNVHQNNIACDEDDTKLIEDNYCERNFFHNVGNPKLSLGCSNSVPIEP 240
              +     ST ++  + ++   +  + L+  +  E+ F  ++      +    S+PIEP
Sbjct: 183 TSSVKMAARSTFEDAGKYDLENSDGSSFLVNASDNEK-FPDDISELDSIIQRLQSIPIEP 242

Query: 241 EWEEDDIYLSHRKDAISMIRSASQHSRAATNAYLRKDHISAKYHSSRAKEQWLAAKMLND 300
           EWEEDD+YLSHRKDA+ ++RSAS HSRAA NA+ R DH SAK HS +A+E WLAA+ LN 
Sbjct: 243 EWEEDDLYLSHRKDALKVMRSASNHSRAAQNAFQRYDHASAKQHSDKAREDWLAAEKLNA 302

Query: 301 KAANEILRTRNIKNGLWKLDLHGLHAAEAVQALQEHLLKIETQNASNRSLSPKKTERK-G 360
           +AA +I+   N  N +WKLDLHGLHA EAVQALQE L  IE     NRS+SP +   K  
Sbjct: 303 EAAKKIIGITNKDNDIWKLDLHGLHATEAVQALQERLQMIEGHFTVNRSVSPNRGRSKNA 362

Query: 361 FWRASSLESLNCIDSK-LDKESTSSRHRPTLLEVITG 388
             R++S E    +D + +  + TSSR     L+VITG
Sbjct: 363 ALRSASQEPFGRLDEEGMHCQRTSSRELRNSLQVITG 392

The following BLAST results are available for this feature:

BLAST of MS020714 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143556.1	1.0e-215	99.22	uncharacterized protein LOC111013424 [Momordica charantia]	[more]
XP_004148966.1	9.2e-153	72.70	uncharacterized protein LOC101223137 [Cucumis sativus] >XP_011659246.1 uncharact...	[more]
XP_038898473.1	1.6e-152	74.49	uncharacterized protein LOC120086100 [Benincasa hispida]	[more]
XP_008451240.1	4.7e-149	71.94	PREDICTED: uncharacterized protein LOC103492590 [Cucumis melo] >XP_008451241.1 P...	[more]
KAA0059625.1	5.2e-148	71.43	Smr (Small MutS Related) domain-containing protein, putative isoform 1 [Cucumis ...	[more]

BLAST of MS020714 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS020714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQL8	4.9e-216	99.22	uncharacterized protein LOC111013424 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0KA90	4.5e-153	72.70	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G374690 PE=4 SV...	[more]
A0A1S3BRS7	2.3e-149	71.94	uncharacterized protein LOC103492590 OS=Cucumis melo OX=3656 GN=LOC103492590 PE=...	[more]
A0A5D3CAF0	2.5e-148	71.43	Smr (Small MutS Related) domain-containing protein, putative isoform 1 OS=Cucumi...	[more]
A0A6J1JSZ2	4.3e-148	72.59	uncharacterized protein LOC111488062 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS020714 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23520.1	1.5e-63	40.55	smr (Small MutS Related) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013899	Domain of unknown function DUF1771	SMART	SM01162	DUF1771_2	coord: 239..304 e-value: 1.4E-14 score: 64.5
IPR013899	Domain of unknown function DUF1771	PFAM	PF08590	DUF1771	coord: 240..303 e-value: 3.4E-13 score: 49.7
None	No IPR available	GENE3D	3.30.1370.110		coord: 287..387 e-value: 8.2E-10 score: 40.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..52
None	No IPR available	PANTHER	PTHR47812	SMR (SMALL MUTS RELATED) DOMAIN-CONTAINING PROTEIN	coord: 1..387
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 311..387 score: 11.887803

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020714.1	MS020714.1	mRNA