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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGG mRNA sequence CGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGG Coding sequence (CDS) CGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGG Protein sequence RTTVSGVRIPPRPQPAKKGRTFPSGGR
Homology
BLAST of MS020713 vs. NCBI nr
Match: THG14067.1 (hypothetical protein TEA_017317 [Camellia sinensis var. sinensis]) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04 Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 RTTVSGVRIPPRPQPAKKGRTFPSGGR 28
RTTVSGVRIPPRPQPA+KGRTFPSGG+
Sbjct: 41 RTTVSGVRIPPRPQPAQKGRTFPSGGK 67
BLAST of MS020713 vs. ExPASy TrEMBL
Match: A0A4V3WNW4 (Protein TIC 214 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017317 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-05 Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 RTTVSGVRIPPRPQPAKKGRTFPSGGR 28
RTTVSGVRIPPRPQPA+KGRTFPSGG+
Sbjct: 41 RTTVSGVRIPPRPQPAQKGRTFPSGGK 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| THG14067.1 | 1.1e-04 | 92.59 | hypothetical protein TEA_017317 [Camellia sinensis var. sinensis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| A0A4V3WNW4 | 5.4e-05 | 92.59 | Protein TIC 214 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017317 PE=3 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..27 |
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS020713.1 | MS020713.1 | mRNA |
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