MS020669 (gene) Bitter gourd (TR) v1

Overview


Name	MS020669
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	embryo-specific protein ATS3A-like
Location	scaffold375: 2063463 .. 2063897 (+)
RNA-Seq Expression	MS020669
Synteny	MS020669

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCCGTCACCGTGGAAACAACCTGCACGAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGGTTCGGCGACACGAACTCGAACGACATCGTCGTAAGACGTTTGAATTCAATGCACGTGAAGAGGGTGGACCCTTTGGAGCCTGAAGTTCTGGACGACATGTCGAGAAAGCCGTTCCAAGCTTGTATGGTGGATCAGTTCCAAGTGACCGGAAAATGCGTGACCTCGCCGGTTTGTTACGTCTACCTAAAACTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCAAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCTGGTTATTTCTATTTCCGACGTGTATTGCCTCGGCACGTGTGGCATGGCTTCGACACGTGTGGAGGCGAAGTCACTCCTTTTGGGATCAAACACCATAGAAAAGTC

mRNA sequence

ATGTACGCCGTCACCGTGGAAACAACCTGCACGAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGGTTCGGCGACACGAACTCGAACGACATCGTCGTAAGACGTTTGAATTCAATGCACGTGAAGAGGGTGGACCCTTTGGAGCCTGAAGTTCTGGACGACATGTCGAGAAAGCCGTTCCAAGCTTGTATGGTGGATCAGTTCCAAGTGACCGGAAAATGCGTGACCTCGCCGGTTTGTTACGTCTACCTAAAACTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCAAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCTGGTTATTTCTATTTCCGACGTGTATTGCCTCGGCACGTGTGGCATGGCTTCGACACGTGTGGAGGCGAAGTCACTCCTTTTGGGATCAAACACCATAGAAAAGTC

Coding sequence (CDS)

ATGTACGCCGTCACCGTGGAAACAACCTGCACGAAGGGCGCCGACACGTCGAACCACGTCAGCCTGAGGTTCGGCGACACGAACTCGAACGACATCGTCGTAAGACGTTTGAATTCAATGCACGTGAAGAGGGTGGACCCTTTGGAGCCTGAAGTTCTGGACGACATGTCGAGAAAGCCGTTCCAAGCTTGTATGGTGGATCAGTTCCAAGTGACCGGAAAATGCGTGACCTCGCCGGTTTGTTACGTCTACCTAAAACTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCAAAGTCCGGTCGCTGGAGGGCCCACATCTTAGCTCTGGTTATTTCTATTTCCGACGTGTATTGCCTCGGCACGTGTGGCATGGCTTCGACACGTGTGGAGGCGAAGTCACTCCTTTTGGGATCAAACACCATAGAAAAGTC

Protein sequence

MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV

Homology

[Close]

BLAST of MS020669 vs. NCBI nr
Match: XP_022146261.1 (embryo-specific protein ATS3A-like [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP
Sbjct: 35  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 94

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP
Sbjct: 95  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 154

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTCGGEVTPFGIKHHRKV
Sbjct: 155 RHVWHGFDTCGGEVTPFGIKHHRKV 179

[Close]

BLAST of MS020669 vs. NCBI nr
Match: XP_038902188.1 (embryo-specific protein ATS3A-like [Benincasa hispida])

HSP 1 Score: 288.5 bits (737), Expect = 3.2e-74
Identity = 132/145 (91.03%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNS  V+RVDPL+P+VLDDMSRKP
Sbjct: 37  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKQVRRVDPLQPQVLDDMSRKP 96

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQACMVDQFQVTGKCVTSP+CY+YLKL GADDWRPGFV+VRSLEGPHLSS YFYFRRVLP
Sbjct: 97  FQACMVDQFQVTGKCVTSPICYLYLKLVGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 156

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTC GEVTPFGIK +RKV
Sbjct: 157 RHVWHGFDTCPGEVTPFGIKRNRKV 181

[Close]

BLAST of MS020669 vs. NCBI nr
Match: XP_008463858.1 (PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 3.2e-74
Identity = 131/145 (90.34%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKP
Sbjct: 36  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 95

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLP
Sbjct: 96  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 155

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTC GEVTPFGIK +RKV
Sbjct: 156 RHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of MS020669 vs. NCBI nr
Match: KAA0035277.1 (uncharacterized protein E6C27_scaffold228G00690 [Cucumis melo var. makuwa] >TYK14359.1 uncharacterized protein E5676_scaffold84G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKP
Sbjct: 1   MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 60

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLP
Sbjct: 61  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 120

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRK 145
           RHVWHGFDTC GEVTPFGIK +RK
Sbjct: 121 RHVWHGFDTCPGEVTPFGIKRNRK 144

[Close]

BLAST of MS020669 vs. NCBI nr
Match: XP_011657238.1 (embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypothetical protein Csa_022990 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 3.0e-72
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKP
Sbjct: 35  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKP 94

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+G DDWRPGFV+VRSL+GPHLSS YFYFRRVLP
Sbjct: 95  FQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLP 154

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTC GEVTPFG+K +RKV
Sbjct: 155 RHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of MS020669 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.4e-17
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPF 61
           Y V ++T+C+  + T + +S+ FGD   N++ V+R                LDD S + F
Sbjct: 50  YTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSRTF 109

Query: 62  QACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPR 121
           + C  D ++++G C+   VCY+YL   G+D W+P  VK+    G  + S  FY+   LP 
Sbjct: 110 EKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFLPN 160

Query: 122 HVWHGFDTCGG 133
            VW+GF+ C G
Sbjct: 170 SVWYGFNVCNG 160

[Close]

BLAST of MS020669 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 46/130 (35.38%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPF 61
           Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F
Sbjct: 50  YTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPSTKTF 109

Query: 62  QACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGY-FYFRRVLP 121
           + C  D FQ+ G C T  +CYVYL  +G D W P  VK+ S    H S    F +   +P
Sbjct: 110 EQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYS----HGSKAVTFPYNTYVP 158

Query: 122 RHVWHGFDTC 131
             VW+GF+ C
Sbjct: 170 ESVWYGFNYC 158

[Close]

BLAST of MS020669 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 37/132 (28.03%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP- 61
           Y V V T+C     T + +S+ FGD + N +   +L                  + R P 
Sbjct: 36  YTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVRGPG 95

Query: 62  -FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVL 121
               C  + FQV G+C+  P+C +Y+   G D W P  +++ S EG    S  F F + +
Sbjct: 96  GLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYS-EGS--KSVKFDFSKSV 148

Query: 122 PR-HVWHGFDTC 131
           P+ + W+G + C
Sbjct: 156 PQLNTWYGHNNC 148

[Close]

BLAST of MS020669 vs. ExPASy TrEMBL
Match: A0A6J1CYS2 (embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC111015516 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 5.9e-82
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP
Sbjct: 35  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 94

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP
Sbjct: 95  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 154

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTCGGEVTPFGIKHHRKV
Sbjct: 155 RHVWHGFDTCGGEVTPFGIKHHRKV 179

[Close]

BLAST of MS020669 vs. ExPASy TrEMBL
Match: A0A1S3CK61 (uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 131/145 (90.34%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKP
Sbjct: 36  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 95

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLP
Sbjct: 96  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 155

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTC GEVTPFGIK +RKV
Sbjct: 156 RHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of MS020669 vs. ExPASy TrEMBL
Match: A0A5D3CVS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00990 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.9e-74
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLNS HV+RVDPLEP+VLDD+SRKP
Sbjct: 1   MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 60

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+GADDWRPGFV+VRSLEGPHLSS YFYFRRVLP
Sbjct: 61  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 120

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRK 145
           RHVWHGFDTC GEVTPFGIK +RK
Sbjct: 121 RHVWHGFDTCPGEVTPFGIKRNRK 144

[Close]

BLAST of MS020669 vs. ExPASy TrEMBL
Match: A0A0A0KC84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVET+CTKGADTSNHVSLRFGDTNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKP
Sbjct: 35  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKP 94

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQ CMVDQFQVTGKCVTSP+CY+YLKL+G DDWRPGFV+VRSL+GPHLSS YFYFRRVLP
Sbjct: 95  FQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLP 154

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHGFDTC GEVTPFG+K +RKV
Sbjct: 155 RHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of MS020669 vs. ExPASy TrEMBL
Match: A0A6J1L2N6 (embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.2e-68
Identity = 123/145 (84.83%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 1   MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP 60
           MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVV  LNS HV+RVD LEP+VLDDM RKP
Sbjct: 35  MYAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVGHLNSKHVRRVDSLEPQVLDDMPRKP 94

Query: 61  FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLP 120
           FQACMVD FQVT KCVTSP+CY+YLK+AGADDWRPGFV VR LE PHLSS  FYFRRVLP
Sbjct: 95  FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLLESPHLSSNNFYFRRVLP 154

Query: 121 RHVWHGFDTCGGEVTPFGIKHHRKV 146
           RHVWHG DTC G+VTPFGIK  RKV
Sbjct: 155 RHVWHGLDTCRGDVTPFGIKRSRKV 179

[Close]

BLAST of MS020669 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 88.6 bits (218), Expect = 4.5e-18
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPF 61
           Y V ++T+C+  + T + +S+ FGD   N++ V+R                LDD S + F
Sbjct: 50  YTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSRTF 109

Query: 62  QACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPR 121
           + C  D ++++G C+   VCY+YL   G+D W+P  VK+    G  + S  FY+   LP 
Sbjct: 110 EKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFLPN 160

Query: 122 HVWHGFDTCGG 133
            VW+GF+ C G
Sbjct: 170 SVWYGFNVCNG 160

[Close]

BLAST of MS020669 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 77.8 bits (190), Expect = 8.0e-15
Identity = 46/130 (35.38%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPF 61
           Y V + T+C+    T + +S+ FGD   N I   R                LDD S K F
Sbjct: 50  YTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPSTKTF 109

Query: 62  QACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGY-FYFRRVLP 121
           + C  D FQ+ G C T  +CYVYL  +G D W P  VK+ S    H S    F +   +P
Sbjct: 110 EQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYS----HGSKAVTFPYNTYVP 158

Query: 122 RHVWHGFDTC 131
             VW+GF+ C
Sbjct: 170 ESVWYGFNYC 158

[Close]

BLAST of MS020669 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 37/132 (28.03%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP- 61
           Y V V T+C     T + +S+ FGD + N +   +L                  + R P 
Sbjct: 36  YTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVRGPG 95

Query: 62  -FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVL 121
               C  + FQV G+C+  P+C +Y+   G D W P  +++ S EG    S  F F + +
Sbjct: 96  GLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYS-EGS--KSVKFDFSKSV 148

Query: 122 PR-HVWHGFDTC 131
           P+ + W+G + C
Sbjct: 156 PQLNTWYGHNNC 148

[Close]

BLAST of MS020669 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 37/132 (28.03%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 2   YAVTVETTCTKGADTSNHVSLRFGDTNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKP- 61
           Y V V T+C     T + +S+ FGD + N +   +L                  + R P 
Sbjct: 8   YTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGG----------------LVRGPG 67

Query: 62  -FQACMVDQFQVTGKCVTSPVCYVYLKLAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVL 121
               C  + FQV G+C+  P+C +Y+   G D W P  +++ S EG    S  F F + +
Sbjct: 68  GLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYS-EGS--KSVKFDFSKSV 120

Query: 122 PR-HVWHGFDTC 131
           P+ + W+G + C
Sbjct: 128 PQLNTWYGHNNC 120

The following BLAST results are available for this feature:

BLAST of MS020669 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146261.1	1.2e-81	100.00	embryo-specific protein ATS3A-like [Momordica charantia]	[more]
XP_038902188.1	3.2e-74	91.03	embryo-specific protein ATS3A-like [Benincasa hispida]	[more]
XP_008463858.1	3.2e-74	90.34	PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo]	[more]
KAA0035277.1	1.2e-73	90.28	uncharacterized protein E6C27_scaffold228G00690 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_011657238.1	3.0e-72	87.59	embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypotheti...	[more]

BLAST of MS020669 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681K2	6.4e-17	33.59	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q6NPM5	1.1e-13	35.38	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q9LYP6	1.9e-08	28.03	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of MS020669 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYS2	5.9e-82	100.00	embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC11101551...	[more]
A0A1S3CK61	1.6e-74	90.34	uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=...	[more]
A0A5D3CVS5	5.9e-74	90.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KC84	1.5e-72	87.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1	[more]
A0A6J1L2N6	8.2e-68	84.83	embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 P...	[more]

BLAST of MS020669 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41475.1	4.5e-18	33.59	Embryo-specific protein 3, (ATS3)	[more]
AT5G62200.1	8.0e-15	35.38	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	1.3e-09	28.03	seed gene 3	[more]
AT5G07190.2	1.3e-09	28.03	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 2..130 e-value: 1.1E-41 score: 141.7
None	No IPR available	PANTHER	PTHR31718:SF30	EMBRYO-SPECIFIC PROTEIN	coord: 2..145
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 2..145
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 2..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020669.1	MS020669.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding