MS020628 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCGAGGATTCTCTGTGTTGTTTCAGCCACGATGCCTCCTCCTTTTCATCGTCTTCCTTGTTTTCCTCGTTTTCGCGCTGTTTACTCCCAAACAGGTATGTTTTAGCTCCTTTTCAGAAATTCTATTGCTCCCCCTATTTCGGATCCGATTGCGAATCCGTGGAAGTAACAGATAATTGGCTGTAGTCGTATCCAATATGTAATTTGAGCTCATGGGTACATGTTATTATCCGCCACTATCGTGTCTTGGAGTTTGTTGCGTGTGGTAGCTAGCTTATCATTTGCTGTTCCCCCGGATTCGTTCTGAATATTGGGATTCATGTTACGGCGCTTGACTGTGCATTACTTCTACCTCCCTTGTTTATGATACATCTTGGTTGGTTTTGTCGGTGGAAGTGTAAACTATGCTTCCATTAAGCTCTTCATTGTCCAACTCTGGTTTGTTTCTGTACGATCCGTGTCAATTTTGTCCAATCATGGAACTTTACGTTGTCCAAGTCCAACAACTTGGTTTACTTCTACGTGGGCTTTTGGTAGTTTCAACTTTGTGGAAGCATAATGGCACACATTGACCTTTAGAACATGATATGGTATGGTGGTTGAGCTGTGGGGATTATCCCACTTGTTCAGGCATCCTTCTTTAGAGGACTCTTTCTAACTTCTAATGAAGGGGCTTTTTCTTCCCTTCCATTTTTCAAGAAAGGTGAGTTTTGTCCTTTGGCCCGCGGTCGTTTATCTATACTATAAATTTCAATAAATAAAAAACCAATTCATTAAATTTTTAATTTATCGAACTTTTGTGTGCGAATTGAATGGACCAAACTTGGCAGCTATGTTGCTATTGTGCGTTTAGTGCCTCTGTGTGTGTCCTTTCTGGTGAATCCTGAGTTCGGGGGTTTTGTTAGTGTTGGTAAGGGGATCTTTCTTAGAGTGCTTTCTTTTATCCAAATTGGTTTTAGTTTTCCTGTCTTGAGATAACTAATTAATGAACGCATAAAGCTCTTTTCTGTTGATGTGTTTTACATATTGTATTCATTGGATTTATGGCTTTCTGTACGAGAGTTTGTGGAATAAAAGAATTTATCCATTCTTTGGCTTCTGTCAATGAAGTTTCCCACGAATCTCTTGTTTTGGTCACAAGATACATGGTTGTTAAAAACAGAAGAAAGATGTTTCCATGCTTCGGTTTGGTTGGATGTGCTGGCTTAAGGGTGATGGCATGCTTAAAAACTGGAATTTATGTTGTTTCTCTGCATGTTTGTCTTTTATTTGACTTATGGAGCAATCATCCCTTCACTTCAAACAACAATATGTTTAACATTACCTTGTGGTGAACTAATGTATATGTATCTGTCATGTAAATTATAGAGGGAAGAGAAACTAGAAGAAGATCCTGAAATTACCCACAGGGTATACTTGGACGTTGATATTGAAGAACAGAGATTAGGTAAAATTCTTGTGCCTATACTTTACGTTGTTACTAGGTTTAAAATGGTAAGGTTATCTCTTTTCTTGTAAGTATTACTTCTTTTGAACTTGAGCCATGACCACTCAAATCATTTGTGAAATAAAACATGTGTGCTTTAGCATATTGATGAAATTTTTTCATATTTGCTTATAATCTCACAGGACTCTCTTTCTTTTCCTTCTCTCTTTTTGTAGGTAGAATCGTGATTGGATTATATGGCCAGGTTGTACCGAAAACTGTAGGTATGTCCTTCCATCACCATATCATTAATGGATGGAGGCTATACGCCTCCTTTATGCATCTCGAAGTAGGTTTAATTTTGTATAAGTTTGTTCATGGACACGTATGACCTGTGAACAATGTACGTGGTTTGATGTGCAAGAGTTAGGATTTTTATGCCTGCAACAAAACTGGGTTTTCTCAGTGGACTTAGATCTCCGCTTGACTTCCACCTGATGTGGAAAAGGGCAATTTAAATTCAAAGTTTTTACTTCTTAGCTTCTAAAATTACATTGGAAAAGTAGAGAGTTTCAACAAGAAGGGGGGAAATTTTCGCCATGGGCCATGCTACCAAGGAGGGATGTTTGTATTCAGTTACTTTAGGACTCAACAGTAGTCCTGGAAGTGTGAATGAAACCTATCTTGCTGCTCCTTATTTCACTTGTCGTTCTGGTTCACTCCAGTAAAAAGAAGACAATATTTTCAGTTACTTCTGATTAGTTTCTGTTTAAGAGATGGTAAAATTTGCCAACTTTTTTGCAGTGTGATTGTTCATCGTTTGTTTTCTACAATAGAATTCTGAAGTTTCCAGTTTGAACTTGCAATATGATCCTATTACATTATGATCACATTTTATTGAAAGTTGTAACTCGTGTTTTTTTGTGCAGAAAATTTTAGGGCTCTGTGCACAGGTATGAGGAATCTTGTGTACTAAATGTTTTTCCCTAATTCTTTTTCCTATATTTTCTAAACTTGCTCGAAATTCAGGGGAGAAAGGTAAAACTACTACTGGAAAAGCACTCCATTATAAGGGAACGCCCTTCCATCGCATTATTTCTGGTTTCATGATTCAAGGTGGTGATATTTTGTACGGTGACGGTAGAGGATATGAATCTATCTATGGTGGTACATTTGCTGATGAAAATTTCAGAACAAAACATTCACATGCAGGTCTTGAGCTCAGAGCTTTCAAATGGCTGTTCACTTAGTCTTATTCTATTGACTAAAAAGTGTCATATCTTCCAGTTTATGGCCACAGTTCTTATGAATGGATGTCTTGTTACAGGTGTTGTCTCCATGGTAAACTCAGGACCGGATTCCAATGGCTCACAATTTTTCATAACCACCATTAAGTCCAGCTGGTAATGTTTTCTTCCCTCTTGCAAGGAATATTAATTGAAGGTCATTTGAAGATTATTTAATGATACTTACCTGTTGGAATTGAGTGCTGAATATAACTCTTTTACTATTTTATTGACAAGGAATGGTTTTGAACTATTAATATTATTTGAGATCACGACGCCTAGTTAATTCGACATTGGCCCTGATGATGTCAGCTGTCATATGTGTATACTCTTTCCAGGCTAGATGGTGAACATGTTGTCTTTGGCAAGGTTATCCAAGGGATGGATTATGTATATGCAATTGAAGGAGGAGCTGGAACCTATAATGGGAAACCTAGAAAGAAGGTTACCATTGCTGACAGTGGAGAGATCCCCAAGAGCAAGTGGGATGAGGAAAGA ATGCCTCGAGGATTCTCTGTGTTGTTTCAGCCACGATGCCTCCTCCTTTTCATCGTCTTCCTTGTTTTCCTCGTTTTCGCGCTGTTTACTCCCAAACAGAGGGAAGAGAAACTAGAAGAAGATCCTGAAATTACCCACAGGGTATACTTGGACGTTGATATTGAAGAACAGAGATTAGGTAGAATCGTGATTGGATTATATGGCCAGGTTGTACCGAAAACTGTAGAAAATTTTAGGGCTCTGTGCACAGGGGAGAAAGGTAAAACTACTACTGGAAAAGCACTCCATTATAAGGGAACGCCCTTCCATCGCATTATTTCTGGTTTCATGATTCAAGGTGGTGATATTTTGTACGGTGACGGTAGAGGATATGAATCTATCTATGGTGGTACATTTGCTGATGAAAATTTCAGAACAAAACATTCACATGCAGGTGTTGTCTCCATGGTAAACTCAGGACCGGATTCCAATGGCTCACAATTTTTCATAACCACCATTAAGTCCAGCTGGCTAGATGGTGAACATGTTGTCTTTGGCAAGGTTATCCAAGGGATGGATTATGTATATGCAATTGAAGGAGGAGCTGGAACCTATAATGGGAAACCTAGAAAGAAGGTTACCATTGCTGACAGTGGAGAGATCCCCAAGAGCAAGTGGGATGAGGAAAGA ATGCCTCGAGGATTCTCTGTGTTGTTTCAGCCACGATGCCTCCTCCTTTTCATCGTCTTCCTTGTTTTCCTCGTTTTCGCGCTGTTTACTCCCAAACAGAGGGAAGAGAAACTAGAAGAAGATCCTGAAATTACCCACAGGGTATACTTGGACGTTGATATTGAAGAACAGAGATTAGGTAGAATCGTGATTGGATTATATGGCCAGGTTGTACCGAAAACTGTAGAAAATTTTAGGGCTCTGTGCACAGGGGAGAAAGGTAAAACTACTACTGGAAAAGCACTCCATTATAAGGGAACGCCCTTCCATCGCATTATTTCTGGTTTCATGATTCAAGGTGGTGATATTTTGTACGGTGACGGTAGAGGATATGAATCTATCTATGGTGGTACATTTGCTGATGAAAATTTCAGAACAAAACATTCACATGCAGGTGTTGTCTCCATGGTAAACTCAGGACCGGATTCCAATGGCTCACAATTTTTCATAACCACCATTAAGTCCAGCTGGCTAGATGGTGAACATGTTGTCTTTGGCAAGGTTATCCAAGGGATGGATTATGTATATGCAATTGAAGGAGGAGCTGGAACCTATAATGGGAAACCTAGAAAGAAGGTTACCATTGCTGACAGTGGAGAGATCCCCAAGAGCAAGTGGGATGAGGAAAGA MPRGFSVLFQPRCLLLFIVFLVFLVFALFTPKQREEKLEEDPEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKTTTGKALHYKGTPFHRIISGFMIQGGDILYGDGRGYESIYGGTFADENFRTKHSHAGVVSMVNSGPDSNGSQFFITTIKSSWLDGEHVVFGKVIQGMDYVYAIEGGAGTYNGKPRKKVTIADSGEIPKSKWDEER Homology
BLAST of MS020628 vs. NCBI nr
Match: XP_022146258.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Momordica charantia]) HSP 1 Score: 453.0 bits (1164), Expect = 1.5e-123 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of MS020628 vs. NCBI nr
Match: XP_038901854.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Benincasa hispida]) HSP 1 Score: 429.5 bits (1103), Expect = 1.8e-116 Identity = 208/222 (93.69%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of MS020628 vs. NCBI nr
Match: XP_008457675.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo] >TYJ99555.1 peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa]) HSP 1 Score: 428.3 bits (1100), Expect = 4.0e-116 Identity = 207/222 (93.24%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of MS020628 vs. NCBI nr
Match: XP_022971097.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucurbita maxima] >XP_023534176.1 peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucurbita pepo subsp. pepo] >KAG7027005.1 Peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 424.9 bits (1091), Expect = 4.4e-115 Identity = 204/222 (91.89%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of MS020628 vs. NCBI nr
Match: XP_022947466.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucurbita moschata]) HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113 Identity = 202/222 (90.99%), Postives = 213/222 (95.95%), Query Frame = 0
BLAST of MS020628 vs. ExPASy Swiss-Prot
Match: O49605 (Peptidyl-prolyl cis-trans isomerase CYP21-1 OS=Arabidopsis thaliana OX=3702 GN=CYP21-1 PE=2 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 9.6e-97 Identity = 172/224 (76.79%), Postives = 197/224 (87.95%), Query Frame = 0
BLAST of MS020628 vs. ExPASy Swiss-Prot
Match: Q8LDP4 (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana OX=3702 GN=CYP19-4 PE=1 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.1e-63 Identity = 121/199 (60.80%), Postives = 147/199 (73.87%), Query Frame = 0
BLAST of MS020628 vs. ExPASy Swiss-Prot
Match: Q9SP02 (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.0e-61 Identity = 119/202 (58.91%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of MS020628 vs. ExPASy Swiss-Prot
Match: Q9TW32 (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum OX=44689 GN=cypB PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.8e-58 Identity = 112/196 (57.14%), Postives = 141/196 (71.94%), Query Frame = 0
BLAST of MS020628 vs. ExPASy Swiss-Prot
Match: Q8L8W5 (Peptidyl-prolyl cis-trans isomerase CYP21-2 OS=Arabidopsis thaliana OX=3702 GN=CYP21-2 PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.4e-57 Identity = 110/176 (62.50%), Postives = 130/176 (73.86%), Query Frame = 0
BLAST of MS020628 vs. ExPASy TrEMBL
Match: A0A6J1CY40 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111015513 PE=3 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 7.3e-124 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of MS020628 vs. ExPASy TrEMBL
Match: A0A5D3BMK6 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001250 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116 Identity = 207/222 (93.24%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of MS020628 vs. ExPASy TrEMBL
Match: A0A1S3C6Q4 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103497319 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116 Identity = 207/222 (93.24%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of MS020628 vs. ExPASy TrEMBL
Match: A0A6J1I115 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111469869 PE=3 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 204/222 (91.89%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of MS020628 vs. ExPASy TrEMBL
Match: A0A0A0LPN3 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_2G270140 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114 Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of MS020628 vs. TAIR 10
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 354.4 bits (908), Expect = 6.8e-98 Identity = 172/224 (76.79%), Postives = 197/224 (87.95%), Query Frame = 0
BLAST of MS020628 vs. TAIR 10
Match: AT2G29960.1 (cyclophilin 5 ) HSP 1 Score: 244.6 bits (623), Expect = 7.6e-65 Identity = 121/199 (60.80%), Postives = 147/199 (73.87%), Query Frame = 0
BLAST of MS020628 vs. TAIR 10
Match: AT5G58710.1 (rotamase CYP 7 ) HSP 1 Score: 238.0 bits (606), Expect = 7.1e-63 Identity = 119/202 (58.91%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of MS020628 vs. TAIR 10
Match: AT2G29960.2 (cyclophilin 5 ) HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60 Identity = 116/199 (58.29%), Postives = 141/199 (70.85%), Query Frame = 0
BLAST of MS020628 vs. TAIR 10
Match: AT3G55920.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 222.6 bits (566), Expect = 3.1e-58 Identity = 110/176 (62.50%), Postives = 130/176 (73.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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