MS020518 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTTTGTGCCTCATCTCAGCACTCAAGTGCGAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTGGGCTTCAGGAGTTGAGGCACCCAGTAAAGGCCGGCCACATTCTTTCCCAGAATCCGAACTGTTTCCTCTGTAGCTCAGAATCTATGAAGATCGATTCAATCGTCCCCCAGATCTCCAGCGACAGAGAACTTGAATTGGGGGAAATTTATTTTCTAATCCCCCTCGCGAAATCCCATCTCCCGCTTTCCCTCACGGACTTGTGCGCTCTGGCTGCTAAAGCAAATGTAGCCCTCGCTACATCCAAGAAGGCGTATCCGTCTCTGAAAGCGGCGCCGAACGCCGTCGGATTCCGAATCGGAGCGCCCGGTGCGTCTTAC ATGGGGGTTTGTGCCTCATCTCAGCACTCAAGTGCGAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTGGGCTTCAGGAGTTGAGGCACCCAGTAAAGGCCGGCCACATTCTTTCCCAGAATCCGAACTGTTTCCTCTGTAGCTCAGAATCTATGAAGATCGATTCAATCGTCCCCCAGATCTCCAGCGACAGAGAACTTGAATTGGGGGAAATTTATTTTCTAATCCCCCTCGCGAAATCCCATCTCCCGCTTTCCCTCACGGACTTGTGCGCTCTGGCTGCTAAAGCAAATGTAGCCCTCGCTACATCCAAGAAGGCGTATCCGTCTCTGAAAGCGGCGCCGAACGCCGTCGGATTCCGAATCGGAGCGCCCGGTGCGTCTTAC ATGGGGGTTTGTGCCTCATCTCAGCACTCAAGTGCGAGCCTCACCAACTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTGGGCTTCAGGAGTTGAGGCACCCAGTAAAGGCCGGCCACATTCTTTCCCAGAATCCGAACTGTTTCCTCTGTAGCTCAGAATCTATGAAGATCGATTCAATCGTCCCCCAGATCTCCAGCGACAGAGAACTTGAATTGGGGGAAATTTATTTTCTAATCCCCCTCGCGAAATCCCATCTCCCGCTTTCCCTCACGGACTTGTGCGCTCTGGCTGCTAAAGCAAATGTAGCCCTCGCTACATCCAAGAAGGCGTATCCGTCTCTGAAAGCGGCGCCGAACGCCGTCGGATTCCGAATCGGAGCGCCCGGTGCGTCTTAC MGVCASSQHSSASLTNWPFTAKIIHTDGGLQELRHPVKAGHILSQNPNCFLCSSESMKIDSIVPQISSDRELELGEIYFLIPLAKSHLPLSLTDLCALAAKANVALATSKKAYPSLKAAPNAVGFRIGAPGASY Homology
BLAST of MS020518 vs. NCBI nr
Match: XP_022148561.1 (uncharacterized protein LOC111017195 [Momordica charantia]) HSP 1 Score: 264.2 bits (674), Expect = 6.0e-67 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of MS020518 vs. NCBI nr
Match: KAA0045945.1 (uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa] >TYK13641.1 uncharacterized protein E5676_scaffold299G001510 [Cucumis melo var. makuwa]) HSP 1 Score: 241.9 bits (616), Expect = 3.2e-60 Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of MS020518 vs. NCBI nr
Match: XP_023512236.1 (uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.6 bits (597), Expect = 5.1e-58 Identity = 120/134 (89.55%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of MS020518 vs. NCBI nr
Match: XP_022944054.1 (uncharacterized protein LOC111448604 [Cucurbita moschata]) HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57 Identity = 118/134 (88.06%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of MS020518 vs. NCBI nr
Match: XP_022986185.1 (uncharacterized protein LOC111484003 [Cucurbita maxima]) HSP 1 Score: 227.3 bits (578), Expect = 8.1e-56 Identity = 116/134 (86.57%), Postives = 122/134 (91.04%), Query Frame = 0
BLAST of MS020518 vs. ExPASy TrEMBL
Match: A0A6J1D5R9 (uncharacterized protein LOC111017195 OS=Momordica charantia OX=3673 GN=LOC111017195 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67 Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of MS020518 vs. ExPASy TrEMBL
Match: A0A5D3CPA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001510 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60 Identity = 120/134 (89.55%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of MS020518 vs. ExPASy TrEMBL
Match: A0A6J1FVY0 (uncharacterized protein LOC111448604 OS=Cucurbita moschata OX=3662 GN=LOC111448604 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57 Identity = 118/134 (88.06%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of MS020518 vs. ExPASy TrEMBL
Match: A0A6J1JDD5 (uncharacterized protein LOC111484003 OS=Cucurbita maxima OX=3661 GN=LOC111484003 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 3.9e-56 Identity = 116/134 (86.57%), Postives = 122/134 (91.04%), Query Frame = 0
BLAST of MS020518 vs. ExPASy TrEMBL
Match: A0A6J1G7N2 (uncharacterized protein LOC111451619 OS=Cucurbita moschata OX=3662 GN=LOC111451619 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55 Identity = 115/133 (86.47%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of MS020518 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19 Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 0
BLAST of MS020518 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 6.5e-19 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of MS020518 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 3.3e-15 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of MS020518 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 4.3e-15 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of MS020518 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 5.3e-13 Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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