MS020516 (gene) Bitter gourd (TR) v1

Overview


Name	MS020516
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	plastid division protein PDV2
Location	scaffold375: 812758 .. 814801 (+)
RNA-Seq Expression	MS020516
Synteny	MS020516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGACGGCATCCACTTGGTCCTCGGCAGAGCCACGGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCAAGCAGTACCACCGCCGCTTCTCACCCGGAGGACGGTGCTTCCGGCGACGCCGAGGATGACGAAGAAGTGGAGCGGCTTTTGAATATCTGCGATGCCCTAGAGTCCTTGGAGACACAGCTCTCTTCGTTGCAGGTTTTCCCTCACTTTCCTTTATCGGATTAGGGCATTTCTCTGTTCTTGGAAATTGTGGTCTCTGCTGCTTTTAATTTAGAATGTAGTTGGTATCTGGATGTCGTATTCTTTTGTTCATTTCACATATTCTGGAGCTGAGAGATTGTTTATCTGCTTTTTGTTGAATCTAGAATGAGGCAAGAAAGAGAATTGGAGCTTTGAAACTGCTTATTGAATTGCTTTGTACTGGCAAACGAGACCTTATTCATTGTTTTCTATGGAATTGTTTATGAATGCAGAAACTGATACTCATACCATAGGAACTGCTTTTCTATGCTGTAAAATCCATTTGACATGTTTCTTTGCTTACTTTTACGAGGACTTTTTCCAAAATTTGAGTGAACAATTTCGGTATTCTCTCTCTCTCTCTCTTCCTACTTCTCACTCTGATCAAAAGCAATGTAGACTGCTCTGTAACTTTTACCTTTAGTTCCATGGTTATAATCATTCTATGTTTTGAACTTCAACTCATGCTATAGGATTAACTTTGAAATATTTGGTGGTTGTTTGTGTGGCATCCAGCATATCTCAATATGAAGATAAGTTAGGGTTGTTTGATAACTTTCGTATTTCTTGTTTTGTTTTTAGTTTTGAGAAATATGTGTTTTTCTCAACTTTTCCAAAATTGTATACAAATTTTGAAAACAAAAAAGAGTTGTCTTTTGTTTCGTGTAACAAATTGAAACAATTATTAAGAGAAAACAGTGAACAAGAAACAAGAAATAAGAAAGTTACCAAATGCGTTTACAAGTCCGATTTGATTATTGTTAACCACCACATATGTAAACCTTGTTTTGTAGGAACCATCAATGGGAGTACTTTTCTCACACCAGCTAGTGAAGTTGTGAATGCGTCTTAGATTATATCGATAGGTTGTTGCCACGAGCACCGGTCATTTATTGTTTGCTTTGCATTTGTATATGTGCGAGAAACCTGAGCGGATGAATTAGTATTGAATTCGGGTGGTTATAAAGGAATAACTCCATAGGTTTATGTTCTTTTTTGTTTTATTACTAAAACTTCAGGATGATGTAACCTATGTTGAATATTTGCATACCTTGTTATATAATAATATGATCCGGACAATTCTTCCAGCACTAATTGACATTGTTTCTCGTTTCATACTAAGGATTTGCAACAACAACAACGATATGAACGAGAAGCTGCCCTCAGCGAGATTGAACACAGTCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTGATAAACGAAGCTTCTGCATTTGCTGGGGAGGCAGTAGAGCACAACCATGACCTCATGCTTCCTCCATATCCAAGCCGACCTCCGTATTCTCTTCACCCAAACAATGGCCATGTGCTACCGTCCTTGTCTGCTCGTAAATCTGTCCGTAATGGCGTAACCTTGAGCTACGTGACAAACAATGCCAAAAAGGAATCAAGTGAGTCATTGACTGCCAGCAAACAAGCGAGCACGAGAAACTCGAGGAATGGATTAGGTTCACTCATAGCTGTAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCTATATTGAGCATGTCTGGTTTTGGGCAACGGATTGCAGCAAAGAGAGGTAGTACTCGTTTGAAGATATCCGGTGTGTTCGAACAGCCATCAACTGGAGAAGAAGAGAGACCGAGAATTCAATGCCCGCCCGGGAAAATCCTGGTAGTGGAAGACGGTGAGGCGCGATGCCTAGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCAGATGTGAACTATGGATGTGGT

mRNA sequence

ATGGAAGAAGACGGCATCCACTTGGTCCTCGGCAGAGCCACGGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCAAGCAGTACCACCGCCGCTTCTCACCCGGAGGACGGTGCTTCCGGCGACGCCGAGGATGACGAAGAAGTGGAGCGGCTTTTGAATATCTGCGATGCCCTAGAGTCCTTGGAGACACAGCTCTCTTCGTTGCAGGATTTGCAACAACAACAACGATATGAACGAGAAGCTGCCCTCAGCGAGATTGAACACAGTCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTGATAAACGAAGCTTCTGCATTTGCTGGGGAGGCAGTAGAGCACAACCATGACCTCATGCTTCCTCCATATCCAAGCCGACCTCCGTATTCTCTTCACCCAAACAATGGCCATGTGCTACCGTCCTTGTCTGCTCGTAAATCTGTCCGTAATGGCGTAACCTTGAGCTACGTGACAAACAATGCCAAAAAGGAATCAAGTGAGTCATTGACTGCCAGCAAACAAGCGAGCACGAGAAACTCGAGGAATGGATTAGGTTCACTCATAGCTGTAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCTATATTGAGCATGTCTGGTTTTGGGCAACGGATTGCAGCAAAGAGAGGTAGTACTCGTTTGAAGATATCCGGTGTGTTCGAACAGCCATCAACTGGAGAAGAAGAGAGACCGAGAATTCAATGCCCGCCCGGGAAAATCCTGGTAGTGGAAGACGGTGAGGCGCGATGCCTAGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCAGATGTGAACTATGGATGTGGT

Coding sequence (CDS)

ATGGAAGAAGACGGCATCCACTTGGTCCTCGGCAGAGCCACGGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCAAGCAGTACCACCGCCGCTTCTCACCCGGAGGACGGTGCTTCCGGCGACGCCGAGGATGACGAAGAAGTGGAGCGGCTTTTGAATATCTGCGATGCCCTAGAGTCCTTGGAGACACAGCTCTCTTCGTTGCAGGATTTGCAACAACAACAACGATATGAACGAGAAGCTGCCCTCAGCGAGATTGAACACAGTCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTGATAAACGAAGCTTCTGCATTTGCTGGGGAGGCAGTAGAGCACAACCATGACCTCATGCTTCCTCCATATCCAAGCCGACCTCCGTATTCTCTTCACCCAAACAATGGCCATGTGCTACCGTCCTTGTCTGCTCGTAAATCTGTCCGTAATGGCGTAACCTTGAGCTACGTGACAAACAATGCCAAAAAGGAATCAAGTGAGTCATTGACTGCCAGCAAACAAGCGAGCACGAGAAACTCGAGGAATGGATTAGGTTCACTCATAGCTGTAGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCTATATTGAGCATGTCTGGTTTTGGGCAACGGATTGCAGCAAAGAGAGGTAGTACTCGTTTGAAGATATCCGGTGTGTTCGAACAGCCATCAACTGGAGAAGAAGAGAGACCGAGAATTCAATGCCCGCCCGGGAAAATCCTGGTAGTGGAAGACGGTGAGGCGCGATGCCTAGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGCTGTGGCAAAACCAGATGTGAACTATGGATGTGGT

Protein sequence

MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGCG

Homology

[Close]

BLAST of MS020516 vs. NCBI nr
Match: XP_022148665.1 (plastid division protein PDV2 [Momordica charantia])

HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153
Identity = 289/292 (98.97%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDDEEVERLLNICDAL 60
           MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDD+EVERLLNICDAL
Sbjct: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDDDEVERLLNICDAL 60

Query: 61  ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA 120
           ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA
Sbjct: 61  ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA 120

Query: 121 VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA 180
           VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA
Sbjct: 121 VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA 180

Query: 181 SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKISGVFEQ 240
           SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLK+SGVFEQ
Sbjct: 181 SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKVSGVFEQ 240

Query: 241 PSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGCG 293
           PSTGEEERPRIQCPPGKILVVEDGE RCLVKERVEVPFSSAVAKPDVNYGCG
Sbjct: 241 PSTGEEERPRIQCPPGKILVVEDGEVRCLVKERVEVPFSSAVAKPDVNYGCG 292

[Close]

BLAST of MS020516 vs. NCBI nr
Match: XP_022947860.1 (plastid division protein PDV2-like [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 3.9e-119
Identity = 246/310 (79.35%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGD----------------- 60
           MEEDGI +VLGRATELRLKISNCIHKA  TT AS  +D ++G                  
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKA--TTIASLLQDPSAGGGNEAANDGGSTSECPAA 60

Query: 61  -AEDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEY 120
             EDDEEVERLLNICDALESLETQLSSLQ LQQQQRYEREAALSEIEHSR MLLDKLK Y
Sbjct: 61  VTEDDEEVERLLNICDALESLETQLSSLQVLQQQQRYEREAALSEIEHSRTMLLDKLKNY 120

Query: 121 KGEHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVT 180
           KGEHLEVINEASAFAGEAVEHNHDLMLPPYP+RPPY+LH NNG + PSLSARKS RNGVT
Sbjct: 121 KGEHLEVINEASAFAGEAVEHNHDLMLPPYPTRPPYALHLNNGQLPPSLSARKSARNGVT 180

Query: 181 LSYVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQR 240
           L+Y TN+AK+ESSESLT SKQASTR+S NGLGSLIA AAKAVFTIVGVVSILSMSGFGQR
Sbjct: 181 LNYTTNDAKRESSESLTTSKQASTRSSTNGLGSLIAAAAKAVFTIVGVVSILSMSGFGQR 240

Query: 241 IAAKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAV 293
           IAAKR S     +G  EQPST +EERP I+CPPGKIL VEDGEARC+VKERVEVPFSSAV
Sbjct: 241 IAAKRVSRSKISNGFVEQPST-KEERPIIRCPPGKILTVEDGEARCVVKERVEVPFSSAV 300

[Close]

BLAST of MS020516 vs. NCBI nr
Match: KAG6605103.1 (Plastid division protein PDV2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.6 bits (1119), Expect = 3.3e-118
Identity = 243/308 (78.90%), Postives = 259/308 (84.09%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTA-ASHPEDGASGDA--------------- 60
           MEEDGI +VLGRATELRLKISNCIHKA++T +    P  G   +A               
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKATTTASLLQDPSAGGGNEAANDGGSPSECPAAVT 60

Query: 61  EDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKG 120
           EDDEEVERLLNICDALESLETQLSSLQ LQQQQRYEREAALSEIEHSR MLLDKLK YKG
Sbjct: 61  EDDEEVERLLNICDALESLETQLSSLQVLQQQQRYEREAALSEIEHSRMMLLDKLKNYKG 120

Query: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLS 180
           EHLEVINEASAFAGEAVEHNHDLMLPPYP+R PY+LH NNG + PSLSARKS RNGVTL+
Sbjct: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPTRLPYALHLNNGQLPPSLSARKSARNGVTLN 180

Query: 181 YVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIA 240
           Y TN+AK+ESSESLT SKQASTR+S NGLGSLIA AAKAVFTIVGVVSILSMSGFGQRIA
Sbjct: 181 YTTNDAKRESSESLTTSKQASTRSSTNGLGSLIAAAAKAVFTIVGVVSILSMSGFGQRIA 240

Query: 241 AKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAK 293
           AKR S     +G  EQPST +EERP I+CPPGKIL VEDGEARC+VKERVEVPFSSAVAK
Sbjct: 241 AKRVSRSKISNGFVEQPST-KEERPIIRCPPGKILTVEDGEARCVVKERVEVPFSSAVAK 300

[Close]

BLAST of MS020516 vs. NCBI nr
Match: XP_023533133.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 241/308 (78.25%), Postives = 259/308 (84.09%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAA----------SHPEDGAS------GDA 60
           MEEDGI +VLGRATELRLKISNCIHKA++T +               DG S      G  
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKATTTASLLQDPSAGVGNEAANDGGSTSECPAGVT 60

Query: 61  EDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKG 120
           EDDEEVERLLNICDALESLETQLSSLQ+LQQQQRYEREAALSEIEHSR MLLDKLK YKG
Sbjct: 61  EDDEEVERLLNICDALESLETQLSSLQELQQQQRYEREAALSEIEHSRTMLLDKLKNYKG 120

Query: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLS 180
           EHLEVINEASAFAGEAVEHNHDLMLPPYP+RPPY+LH NNG + PSLSARKS RNGVTL+
Sbjct: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPTRPPYALHLNNGQLPPSLSARKSARNGVTLN 180

Query: 181 YVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIA 240
           Y TN+A++ESSESLT SKQ STR+S NGLGSLIA AAKAVFTIVGVVSILSMSGFGQ+IA
Sbjct: 181 YTTNDAQRESSESLTTSKQVSTRSSTNGLGSLIAAAAKAVFTIVGVVSILSMSGFGQQIA 240

Query: 241 AKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAK 293
           AKR S     +G  EQPST +EER  I+CPPGKIL VEDGEARC+VKERVEVPFSSAVAK
Sbjct: 241 AKRVSRSKISNGFVEQPST-KEERSIIRCPPGKILTVEDGEARCVVKERVEVPFSSAVAK 300

[Close]

BLAST of MS020516 vs. NCBI nr
Match: XP_023006832.1 (plastid division protein PDV2-like [Cucurbita maxima])

HSP 1 Score: 433.0 bits (1112), Expect = 2.1e-117
Identity = 239/308 (77.60%), Postives = 258/308 (83.77%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTA-ASHPEDGASGDA--------------- 60
           MEEDGI +VLGRATELRLKISNCIHKA++T +    P  G   +A               
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKATTTASLLQDPSSGGGNEAANDGGSTYECPAGVT 60

Query: 61  EDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKG 120
           EDD+EVERLLNICDALESLETQLSSLQ+LQQQQRYEREAALSEIEHSR +LLDKLK+YKG
Sbjct: 61  EDDDEVERLLNICDALESLETQLSSLQELQQQQRYEREAALSEIEHSRTILLDKLKDYKG 120

Query: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLS 180
           EHLEVINEASAFAGEAVEHNHDLMLPPYP+RPPY+LH NNG + PSLS RKS RNGVTL+
Sbjct: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPTRPPYALHLNNGQLPPSLSTRKSARNGVTLN 180

Query: 181 YVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIA 240
           Y TN+AK+ESSESLT SKQ STR+S NGLGSL+A AAKAVFTIVGVVSILSMSGFGQRIA
Sbjct: 181 YTTNDAKRESSESLTTSKQVSTRSSTNGLGSLLAAAAKAVFTIVGVVSILSMSGFGQRIA 240

Query: 241 AKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAK 293
           AK  S R KIS  F +    EEERP I+CPPGKIL VEDGEARCLVKERVEVPFSSAVAK
Sbjct: 241 AKSVS-RPKISNGFVEHPLTEEERPIIRCPPGKILTVEDGEARCLVKERVEVPFSSAVAK 300

[Close]

BLAST of MS020516 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-61
Identity = 149/316 (47.15%), Postives = 201/316 (63.61%), Query Frame = 0


Query: 2   EEDGIHLVLGRATELRLKISNCIHKASSTTAASHPE-----------------------D 61
           +E+GI L+L RATELRLKIS+CI   SSTT + + +                       D
Sbjct: 3   DEEGIGLILARATELRLKISDCIDN-SSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFD 62

Query: 62  GASGDAEDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDK 121
             S +  D+ E ERLL I DALE+LE+QL+SLQ+L+Q+Q+YE++ ALSEI++SRKMLL+K
Sbjct: 63  SISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEK 122

Query: 122 LKEYKGEHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYS--LHPNNGHVLPSLSARKS 181
           LKEYKG+  EV+ E + FAGE V++ +DL+LPPYP  PP S  L  NNG++    S +KS
Sbjct: 123 LKEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKS 182

Query: 182 VRNGVTLSYVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSM 241
             NG    +V N A+ +       S    +  S +G+   +   AK V  I+GV+S+LS 
Sbjct: 183 DANGFGSGHVRNEAEAK-------SPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSA 242

Query: 242 SGFGQRIAAKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEV 293
           SG+G  +  KRG++ L + G+    +T  +  P  QCPPGK+LV+EDGEARCLVKERVE+
Sbjct: 243 SGYGPEM-RKRGAS-LNLFGLLPHRATRGKRTPN-QCPPGKVLVIEDGEARCLVKERVEI 302

[Close]

BLAST of MS020516 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.9e-04
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 42  GDAEDD-----EEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLL 101
           G A DD     +E + L  I  ALE+LE QL     +  QQR E++ A++ +E SR +L 
Sbjct: 68  GFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQSRILLA 127

Query: 102 DKLKEYKGEHLEVINEASAFAGEAVEHNH 126
            +L E+ G++  V+ EA AF G    ++H
Sbjct: 128 MRLAEHHGKNYGVLEEALAFVGSIKSNSH 156

[Close]

BLAST of MS020516 vs. ExPASy TrEMBL
Match: A0A6J1D3J0 (plastid division protein PDV2 OS=Momordica charantia OX=3673 GN=LOC111017267 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 289/292 (98.97%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDDEEVERLLNICDAL 60
           MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDD+EVERLLNICDAL
Sbjct: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGDAEDDDEVERLLNICDAL 60

Query: 61  ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA 120
           ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA
Sbjct: 61  ESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEA 120

Query: 121 VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA 180
           VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA
Sbjct: 121 VEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTA 180

Query: 181 SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKISGVFEQ 240
           SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLK+SGVFEQ
Sbjct: 181 SKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKVSGVFEQ 240

Query: 241 PSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGCG 293
           PSTGEEERPRIQCPPGKILVVEDGE RCLVKERVEVPFSSAVAKPDVNYGCG
Sbjct: 241 PSTGEEERPRIQCPPGKILVVEDGEVRCLVKERVEVPFSSAVAKPDVNYGCG 292

[Close]

BLAST of MS020516 vs. ExPASy TrEMBL
Match: A0A6J1G827 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111451618 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.9e-119
Identity = 246/310 (79.35%), Postives = 261/310 (84.19%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTAASHPEDGASGD----------------- 60
           MEEDGI +VLGRATELRLKISNCIHKA  TT AS  +D ++G                  
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKA--TTIASLLQDPSAGGGNEAANDGGSTSECPAA 60

Query: 61  -AEDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEY 120
             EDDEEVERLLNICDALESLETQLSSLQ LQQQQRYEREAALSEIEHSR MLLDKLK Y
Sbjct: 61  VTEDDEEVERLLNICDALESLETQLSSLQVLQQQQRYEREAALSEIEHSRTMLLDKLKNY 120

Query: 121 KGEHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVT 180
           KGEHLEVINEASAFAGEAVEHNHDLMLPPYP+RPPY+LH NNG + PSLSARKS RNGVT
Sbjct: 121 KGEHLEVINEASAFAGEAVEHNHDLMLPPYPTRPPYALHLNNGQLPPSLSARKSARNGVT 180

Query: 181 LSYVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQR 240
           L+Y TN+AK+ESSESLT SKQASTR+S NGLGSLIA AAKAVFTIVGVVSILSMSGFGQR
Sbjct: 181 LNYTTNDAKRESSESLTTSKQASTRSSTNGLGSLIAAAAKAVFTIVGVVSILSMSGFGQR 240

Query: 241 IAAKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAV 293
           IAAKR S     +G  EQPST +EERP I+CPPGKIL VEDGEARC+VKERVEVPFSSAV
Sbjct: 241 IAAKRVSRSKISNGFVEQPST-KEERPIIRCPPGKILTVEDGEARCVVKERVEVPFSSAV 300

[Close]

BLAST of MS020516 vs. ExPASy TrEMBL
Match: A0A6J1KWX0 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111499505 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 1.0e-117
Identity = 239/308 (77.60%), Postives = 258/308 (83.77%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASSTTA-ASHPEDGASGDA--------------- 60
           MEEDGI +VLGRATELRLKISNCIHKA++T +    P  G   +A               
Sbjct: 1   MEEDGIDMVLGRATELRLKISNCIHKATTTASLLQDPSSGGGNEAANDGGSTYECPAGVT 60

Query: 61  EDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKG 120
           EDD+EVERLLNICDALESLETQLSSLQ+LQQQQRYEREAALSEIEHSR +LLDKLK+YKG
Sbjct: 61  EDDDEVERLLNICDALESLETQLSSLQELQQQQRYEREAALSEIEHSRTILLDKLKDYKG 120

Query: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLS 180
           EHLEVINEASAFAGEAVEHNHDLMLPPYP+RPPY+LH NNG + PSLS RKS RNGVTL+
Sbjct: 121 EHLEVINEASAFAGEAVEHNHDLMLPPYPTRPPYALHLNNGQLPPSLSTRKSARNGVTLN 180

Query: 181 YVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIA 240
           Y TN+AK+ESSESLT SKQ STR+S NGLGSL+A AAKAVFTIVGVVSILSMSGFGQRIA
Sbjct: 181 YTTNDAKRESSESLTTSKQVSTRSSTNGLGSLLAAAAKAVFTIVGVVSILSMSGFGQRIA 240

Query: 241 AKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAK 293
           AK  S R KIS  F +    EEERP I+CPPGKIL VEDGEARCLVKERVEVPFSSAVAK
Sbjct: 241 AKSVS-RPKISNGFVEHPLTEEERPIIRCPPGKILTVEDGEARCLVKERVEVPFSSAVAK 300

[Close]

BLAST of MS020516 vs. ExPASy TrEMBL
Match: A0A6J1JFD2 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111484002 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.3e-115
Identity = 231/301 (76.74%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASST--TAASHPEDGAS------GDAEDDEEVER 60
           MEED I +VL RAT+LRLKISNCIH A++T  T     +DG S      GD EDDEEVER
Sbjct: 1   MEEDSIDMVLARATDLRLKISNCIHNATTTARTGNEAADDGGSASKTLVGDTEDDEEVER 60

Query: 61  LLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINE 120
           LL++CDALESLETQLSSLQDLQQQQRYEREAALSEIEH+RKMLLDKLKEYKGEHL+VINE
Sbjct: 61  LLSVCDALESLETQLSSLQDLQQQQRYEREAALSEIEHNRKMLLDKLKEYKGEHLDVINE 120

Query: 121 ASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKK 180
           ASAFAGEAV++NHD MLPPYPSR P+ LH NNGH+LPSLSARK+  NGV LSY+ N+ ++
Sbjct: 121 ASAFAGEAVKNNHDFMLPPYPSRLPFPLHLNNGHLLPSLSARKAAHNGVALSYMKNDMER 180

Query: 181 ESSESLTASKQASTRNS-RNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTR 240
           ESSESLT SKQAS RNS RNG GSL+A AAKAVFTIVGVVSI+SMSGFG RI  KR +T 
Sbjct: 181 ESSESLTTSKQASMRNSRRNGFGSLVAAAAKAVFTIVGVVSIMSMSGFGPRIVVKRATTH 240

Query: 241 LKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGC 293
           LK S   EQPST E+ERPR +CPPGKILVVEDGE RCLVKER+EVPFSSAV KPDVNYGC
Sbjct: 241 LKKSSAIEQPST-EDERPRTRCPPGKILVVEDGEERCLVKERIEVPFSSAVVKPDVNYGC 300

[Close]

BLAST of MS020516 vs. ExPASy TrEMBL
Match: A0A6J1FXM6 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111448603 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.5e-113
Identity = 228/300 (76.00%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1   MEEDGIHLVLGRATELRLKISNCIHKASST--TAASHPEDGAS------GDAEDDEEVER 60
           MEED I +VL RAT+LRLKISNCIH A++T  T     +DG S      GD EDDEEVER
Sbjct: 1   MEEDSIDMVLARATDLRLKISNCIHNATTTARTGNEAADDGGSGSETAVGDTEDDEEVER 60

Query: 61  LLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINE 120
           LL++CDALESLETQLSSLQDLQQQQRYEREAALSEIEH+RKMLLDKLKEYKGEHLEVINE
Sbjct: 61  LLSVCDALESLETQLSSLQDLQQQQRYEREAALSEIEHNRKMLLDKLKEYKGEHLEVINE 120

Query: 121 ASAFAGEAVEHNHDLMLPPYPSRPPYSLHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKK 180
           ASAFAGEAV++NHD MLPPYPSR P+ LH NNGH+LPSLSARK+  NGV+LSY+ N+ ++
Sbjct: 121 ASAFAGEAVKNNHDFMLPPYPSRLPFPLHLNNGHLLPSLSARKAAHNGVSLSYMKNDTER 180

Query: 181 ESSESLTASKQASTRNS-RNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTR 240
           ESSESLT +KQASTRNS RNG GSL+A AAKAVFTIVGVV+I+S+SGFG RI  KR ST 
Sbjct: 181 ESSESLTTNKQASTRNSRRNGFGSLVAAAAKAVFTIVGVVTIMSISGFGPRIVVKRASTH 240

Query: 241 LKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGC 292
           L  S   EQPST E+ERPR +CP GKILVVEDGE RCLVKER+EVPFSSAV KPDVNYGC
Sbjct: 241 LMKSSAIEQPST-EDERPRTRCPLGKILVVEDGEERCLVKERIEVPFSSAVVKPDVNYGC 299

[Close]

BLAST of MS020516 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 )

HSP 1 Score: 238.4 bits (607), Expect = 7.1e-63
Identity = 149/316 (47.15%), Postives = 201/316 (63.61%), Query Frame = 0


Query: 2   EEDGIHLVLGRATELRLKISNCIHKASSTTAASHPE-----------------------D 61
           +E+GI L+L RATELRLKIS+CI   SSTT + + +                       D
Sbjct: 3   DEEGIGLILARATELRLKISDCIDN-SSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFD 62

Query: 62  GASGDAEDDEEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLLDK 121
             S +  D+ E ERLL I DALE+LE+QL+SLQ+L+Q+Q+YE++ ALSEI++SRKMLL+K
Sbjct: 63  SISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEK 122

Query: 122 LKEYKGEHLEVINEASAFAGEAVEHNHDLMLPPYPSRPPYS--LHPNNGHVLPSLSARKS 181
           LKEYKG+  EV+ E + FAGE V++ +DL+LPPYP  PP S  L  NNG++    S +KS
Sbjct: 123 LKEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKS 182

Query: 182 VRNGVTLSYVTNNAKKESSESLTASKQASTRNSRNGLGSLIAVAAKAVFTIVGVVSILSM 241
             NG    +V N A+ +       S    +  S +G+   +   AK V  I+GV+S+LS 
Sbjct: 183 DANGFGSGHVRNEAEAK-------SPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSA 242

Query: 242 SGFGQRIAAKRGSTRLKISGVFEQPSTGEEERPRIQCPPGKILVVEDGEARCLVKERVEV 293
           SG+G  +  KRG++ L + G+    +T  +  P  QCPPGK+LV+EDGEARCLVKERVE+
Sbjct: 243 SGYGPEM-RKRGAS-LNLFGLLPHRATRGKRTPN-QCPPGKVLVIEDGEARCLVKERVEI 302

[Close]

BLAST of MS020516 vs. TAIR 10
Match: AT2G16070.1 (plastid division2 )

HSP 1 Score: 185.7 bits (470), Expect = 5.5e-47
Identity = 109/224 (48.66%), Postives = 149/224 (66.52%), Query Frame = 0


Query: 71  QDLQQQQRYEREAALSEIEHSRKMLLDKLKEYKGEHLEVINEASAFAGEAVEHNHDLMLP 130
           Q+L+Q+Q+YE++ ALSEI++SRKMLL+KLKEYKG+  EV+ E + FAGE V++ +DL+LP
Sbjct: 11  QNLRQRQQYEKQLALSEIDYSRKMLLEKLKEYKGKDFEVLRETTTFAGERVDYENDLLLP 70

Query: 131 PYPSRPPYS--LHPNNGHVLPSLSARKSVRNGVTLSYVTNNAKKESSESLTASKQASTRN 190
           PYP  PP S  L  NNG++    S +KS  NG    +V N A+ +       S    +  
Sbjct: 71  PYPVHPPLSLGLDNNNGYLSHLPSKKKSDANGFGSGHVRNEAEAK-------SPNGGSGG 130

Query: 191 SRNGLGSLIAVAAKAVFTIVGVVSILSMSGFGQRIAAKRGSTRLKISGVFEQPSTGEEER 250
           S +G+   +   AK V  I+GV+S+LS SG+G  +  KRG++ L + G+    +T  +  
Sbjct: 131 SSHGVIRFLGSVAKIVLPIIGVISLLSASGYGPEM-RKRGAS-LNLFGLLPHRATRGKRT 190

Query: 251 PRIQCPPGKILVVEDGEARCLVKERVEVPFSSAVAKPDVNYGCG 293
           P  QCPPGK+LV+EDGEARCLVKERVE+PF S VAK DV YG G
Sbjct: 191 PN-QCPPGKVLVIEDGEARCLVKERVEIPFDSVVAKRDVTYGYG 224

[Close]

BLAST of MS020516 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 42  GDAEDD-----EEVERLLNICDALESLETQLSSLQDLQQQQRYEREAALSEIEHSRKMLL 101
           G A DD     +E + L  I  ALE+LE QL     +  QQR E++ A++ +E SR +L 
Sbjct: 68  GFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQSRILLA 127

Query: 102 DKLKEYKGEHLEVINEASAFAGEAVEHNH 126
            +L E+ G++  V+ EA AF G    ++H
Sbjct: 128 MRLAEHHGKNYGVLEEALAFVGSIKSNSH 156

The following BLAST results are available for this feature:

BLAST of MS020516 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148665.1	2.4e-153	98.97	plastid division protein PDV2 [Momordica charantia]	[more]
XP_022947860.1	3.9e-119	79.35	plastid division protein PDV2-like [Cucurbita moschata]	[more]
KAG6605103.1	3.3e-118	78.90	Plastid division protein PDV2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023533133.1	1.2e-117	78.25	plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006832.1	2.1e-117	77.60	plastid division protein PDV2-like [Cucurbita maxima]	[more]

BLAST of MS020516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XII1	1.0e-61	47.15	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]
Q9FK13	1.9e-04	37.08	Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1	[more]

BLAST of MS020516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3J0	1.2e-153	98.97	plastid division protein PDV2 OS=Momordica charantia OX=3673 GN=LOC111017267 PE=...	[more]
A0A6J1G827	1.9e-119	79.35	plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111451618...	[more]
A0A6J1KWX0	1.0e-117	77.60	plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111499505 P...	[more]
A0A6J1JFD2	1.3e-115	76.74	plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111484002 P...	[more]
A0A6J1FXM6	1.5e-113	76.00	plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111448603...	[more]

BLAST of MS020516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16070.2	7.1e-63	47.15	plastid division2	[more]
AT2G16070.1	5.5e-47	48.66	plastid division2	[more]
AT5G53280.1	1.4e-05	37.08	plastid division1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..80
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	PANTHER	PTHR33600:SF3	PLASTID DIVISION PROTEIN PDV2	coord: 1..292
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	PLASTID DIVISION PROTEIN PDV2	coord: 1..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020516.1	MS020516.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission