MS020336 (gene) Bitter gourd (TR) v1

Overview


Name	MS020336
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	non-specific lipid-transfer protein-like protein At2g13820
Location	scaffold665: 1122669 .. 1123001 (+)
RNA-Seq Expression	MS020336
Synteny	MS020336

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTATTGGATCAGTGGTAGTGGTAATTGTGGCGTTGAATATTCGGCATCAGAGCTTGGGTCAGTCACTTGGTTGCACCACGGCGTTGATAAGCTTATCTCCGTGCTTGAACTTCGTTACTGGAAGCTCTTCTAATTCTTCCACTCCATCTTCCTCTTGCTGCTCACGCCTTGCCAACGTGGTCCAATCGCAGCCACAGTGCCTTTGCTCAGCGCTTAACGGAGGCGCCGCCGGTGGCGGTGTCACCATCAACCCCACTCGAGCTCTTGCGCTTCCCGCTGCTTGCCATCTTCAAACGCCGCCGCCTAGCCGTTGTAACGGTAACCAC

mRNA sequence

ATGGGTATTATTGGATCAGTGGTAGTGGTAATTGTGGCGTTGAATATTCGGCATCAGAGCTTGGGTCAGTCACTTGGTTGCACCACGGCGTTGATAAGCTTATCTCCGTGCTTGAACTTCGTTACTGGAAGCTCTTCTAATTCTTCCACTCCATCTTCCTCTTGCTGCTCACGCCTTGCCAACGTGGTCCAATCGCAGCCACAGTGCCTTTGCTCAGCGCTTAACGGAGGCGCCGCCGGTGGCGGTGTCACCATCAACCCCACTCGAGCTCTTGCGCTTCCCGCTGCTTGCCATCTTCAAACGCCGCCGCCTAGCCGTTGTAACGGTAACCAC

Coding sequence (CDS)

ATGGGTATTATTGGATCAGTGGTAGTGGTAATTGTGGCGTTGAATATTCGGCATCAGAGCTTGGGTCAGTCACTTGGTTGCACCACGGCGTTGATAAGCTTATCTCCGTGCTTGAACTTCGTTACTGGAAGCTCTTCTAATTCTTCCACTCCATCTTCCTCTTGCTGCTCACGCCTTGCCAACGTGGTCCAATCGCAGCCACAGTGCCTTTGCTCAGCGCTTAACGGAGGCGCCGCCGGTGGCGGTGTCACCATCAACCCCACTCGAGCTCTTGCGCTTCCCGCTGCTTGCCATCTTCAAACGCCGCCGCCTAGCCGTTGTAACGGTAACCAC

Protein sequence

MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCNGNH

Homology

[Close]

BLAST of MS020336 vs. NCBI nr
Match: XP_022146032.1 (non-specific lipid-transfer protein-like protein At2g13820 [Momordica charantia])

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA 60
           MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA
Sbjct: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA 60

Query: 61  NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN
Sbjct: 61  NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 108

[Close]

BLAST of MS020336 vs. NCBI nr
Match: XP_038888862.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-31
Identity = 81/112 (72.32%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MGIIGSVV-VVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRL 60
           MGI  S++ VV+V L++ H SLGQS GCTTALISLSPCL ++T + + S  PSSSCCSRL
Sbjct: 1   MGINESIILVVVVGLSMSHGSLGQSSGCTTALISLSPCLTYITATGTTS--PSSSCCSRL 60

Query: 61  ANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCNGN 111
           A VVQSQP+CLCSALNGGAA   GVTIN TRALALPAAC LQTPPP+RCN N
Sbjct: 61  ATVVQSQPRCLCSALNGGAAASLGVTINQTRALALPAACRLQTPPPTRCNDN 110

[Close]

BLAST of MS020336 vs. NCBI nr
Match: XP_022996122.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima])

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSR 60
           MGI  ++ +++VA  + H+S+ QS+GCTTALISLSPCL + TGS  SS S+ PSSSCCSR
Sbjct: 1   MGIESALFLLLVAFGMSHESVAQSVGCTTALISLSPCLTYTTGSGGSSTSTAPSSSCCSR 60

Query: 61  LANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCN 109
           LA VVQSQPQCLCSALNGGAA   GVTIN TRAL LPAAC++QTPPPSRCN
Sbjct: 61  LATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACNVQTPPPSRCN 111

[Close]

BLAST of MS020336 vs. NCBI nr
Match: XP_022931068.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata])

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSR 60
           MGI  ++ +++VA  + H+S+ QS GCTTALISLSPCL ++TGS  SS S+ PSSSCCSR
Sbjct: 19  MGIESALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSSTSTAPSSSCCSR 78

Query: 61  LANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCN 109
           LA VVQSQPQCLCSALNGGAA   GVTIN TRAL LPAAC +QTPPPSRCN
Sbjct: 79  LATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACSVQTPPPSRCN 129

[Close]

BLAST of MS020336 vs. NCBI nr
Match: KAG6606419.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036357.1 Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.4 bits (363), Expect = 5.7e-31
Identity = 78/111 (70.27%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSR 60
           MGI  ++ +++VA  + H+S+ QS GCTTALISLSPCL ++TGS  SS S+ PSSSCCSR
Sbjct: 1   MGIESALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSSTSTAPSSSCCSR 60

Query: 61  LANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCN 109
           LA VVQSQPQCLCSALNGGAA   GVTIN TRAL LP AC +QTPPPSRCN
Sbjct: 61  LATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPVACSVQTPPPSRCN 111

[Close]

BLAST of MS020336 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.6e-21
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 4   IGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVV 63
           +G V + +    +    +     CT ALIS+SPCLN++TG   NS++P+  CC++L+ VV
Sbjct: 5   MGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITG---NSTSPNQQCCNQLSRVV 64

Query: 64  QSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           QS P CLC  LNGG +  G+ +N T+AL LP AC++QTPP SRCN
Sbjct: 65  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCN 106

[Close]

BLAST of MS020336 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.4e-18
Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 8   VVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVVQSQP 67
           +++ +AL      +     CT  LIS++PCL+F+T    N+S PS  CC++LA+VV+   
Sbjct: 7   LILFIALMRVMSIVSAQSSCTNVLISMAPCLSFIT---QNTSLPSQQCCNQLAHVVRYSS 66

Query: 68  QCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           +CLC  L+GG +  G+ +N T+ALALP ACH++TPP SRC+
Sbjct: 67  ECLCQVLDGGGSQLGINVNETQALALPKACHVETPPASRCH 104

[Close]

BLAST of MS020336 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 9.8e-18
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQ---SLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCS 60
           MG   S  +  VAL     S+ +   S  C + L +LSPCL+++TG   NS+TPS  CCS
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITG---NSTTPSQPCCS 60

Query: 61  RLANVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           RL +V++S PQC+CSA+N      G+ IN T+AL LP AC++QTPP ++CN
Sbjct: 61  RLDSVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCN 108

[Close]

BLAST of MS020336 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 3   IIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANV 62
           +I +++ +++A  +   +     GC   L SLSPCL ++ G    SS+PS SCC + + V
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNG---GSSSPSWSCCRQFSTV 60

Query: 63  VQSQPQCLCSALNGGAAG-GGVTINPTRALALPAACHLQTPPPSRCN 109
           VQS P+CLCS +N   +   G   N T AL LP AC++QTP PS CN
Sbjct: 61  VQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCN 104

[Close]

BLAST of MS020336 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-10
Identity = 35/100 (35.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 9   VVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVVQSQPQ 68
           ++++ L++    +  +  C T +I+L PCL F++     + TP++SCCS L N++ ++P 
Sbjct: 10  LLLLVLSVSSPYVHGASDCDTLVITLFPCLPFIS-IGGTADTPTASCCSSLKNILDTKPI 69

Query: 69  CLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           CLC  L    A  G+ +N T++  LP AC L  PP S C+
Sbjct: 70  CLCEGLK--KAPLGIKLNVTKSATLPVACKLNAPPVSACD 106

[Close]

BLAST of MS020336 vs. ExPASy TrEMBL
Match: A0A6J1CYC7 (non-specific lipid-transfer protein-like protein At2g13820 OS=Momordica charantia OX=3673 GN=LOC111015341 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA 60
           MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA
Sbjct: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLA 60

Query: 61  NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN
Sbjct: 61  NVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 108

[Close]

BLAST of MS020336 vs. ExPASy TrEMBL
Match: A0A6J1K123 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111491438 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.3e-32
Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSR 60
           MGI  ++ +++VA  + H+S+ QS+GCTTALISLSPCL + TGS  SS S+ PSSSCCSR
Sbjct: 1   MGIESALFLLLVAFGMSHESVAQSVGCTTALISLSPCLTYTTGSGGSSTSTAPSSSCCSR 60

Query: 61  LANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCN 109
           LA VVQSQPQCLCSALNGGAA   GVTIN TRAL LPAAC++QTPPPSRCN
Sbjct: 61  LATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACNVQTPPPSRCN 111

[Close]

BLAST of MS020336 vs. ExPASy TrEMBL
Match: A0A6J1EXB7 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111437366 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.5e-32
Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSR 60
           MGI  ++ +++VA  + H+S+ QS GCTTALISLSPCL ++TGS  SS S+ PSSSCCSR
Sbjct: 19  MGIESALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSSTSTAPSSSCCSR 78

Query: 61  LANVVQSQPQCLCSALNGGAAGG-GVTINPTRALALPAACHLQTPPPSRCN 109
           LA VVQSQPQCLCSALNGGAA   GVTIN TRAL LPAAC +QTPPPSRCN
Sbjct: 79  LATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPAACSVQTPPPSRCN 129

[Close]

BLAST of MS020336 vs. ExPASy TrEMBL
Match: A0A0A0KGC1 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G410100 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-29
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 7   VVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGS--SSNSSTPSSSCCSRLANVVQ 66
           V VV+V L++ H SLGQS GCTTALI+LSPCL ++  +  ++ S+TPSSSCCSRLA V+Q
Sbjct: 11  VTVVVVGLSMSHSSLGQSGGCTTALITLSPCLTYINAAAGTTTSNTPSSSCCSRLATVLQ 70

Query: 67  SQPQCLCSALNGG--AAGGGVTINPTRALALPAACHLQTPPPSRCNG 110
           S+P+CLCSAL+GG  AA  GVTIN TRAL LPAAC LQTPPPSRCNG
Sbjct: 71  SKPRCLCSALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNG 117

[Close]

BLAST of MS020336 vs. ExPASy TrEMBL
Match: A0A1S3BLF1 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103491327 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-29
Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MGIIGSVVV---VIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSN-SSTPSSSCC 60
           MG+I   ++   V+V L++ H SLGQS GCTTALI+LSPCL ++  ++   S+TPSSSCC
Sbjct: 1   MGLIRESIILVSVVVGLSMSHSSLGQSGGCTTALITLSPCLTYINAAAGTASNTPSSSCC 60

Query: 61  SRLANVVQSQPQCLCSALNGG--AAGGGVTINPTRALALPAACHLQTPPPSRCNGNH 112
           SRLA +VQSQP+CLCSAL+GG  AA  GVTIN TRAL LPAAC LQTPPPSRCN N+
Sbjct: 61  SRLATIVQSQPRCLCSALSGGGAAASLGVTINQTRALQLPAACRLQTPPPSRCNENN 117

[Close]

BLAST of MS020336 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-22
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 4   IGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVV 63
           +G V + +    +    +     CT ALIS+SPCLN++TG   NS++P+  CC++L+ VV
Sbjct: 5   MGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITG---NSTSPNQQCCNQLSRVV 64

Query: 64  QSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           QS P CLC  LNGG +  G+ +N T+AL LP AC++QTPP SRCN
Sbjct: 65  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCN 106

[Close]

BLAST of MS020336 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19
Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 8   VVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVVQSQP 67
           +++ +AL      +     CT  LIS++PCL+F+T    N+S PS  CC++LA+VV+   
Sbjct: 7   LILFIALMRVMSIVSAQSSCTNVLISMAPCLSFIT---QNTSLPSQQCCNQLAHVVRYSS 66

Query: 68  QCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           +CLC  L+GG +  G+ +N T+ALALP ACH++TPP SRC+
Sbjct: 67  ECLCQVLDGGGSQLGINVNETQALALPKACHVETPPASRCH 104

[Close]

BLAST of MS020336 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 7.0e-19
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MGIIGSVVVVIVALNIRHQSLGQ---SLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCS 60
           MG   S  +  VAL     S+ +   S  C + L +LSPCL+++TG   NS+TPS  CCS
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITG---NSTTPSQPCCS 60

Query: 61  RLANVVQSQPQCLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           RL +V++S PQC+CSA+N      G+ IN T+AL LP AC++QTPP ++CN
Sbjct: 61  RLDSVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCN 108

[Close]

BLAST of MS020336 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 3   IIGSVVVVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANV 62
           +I +++ +++A  +   +     GC   L SLSPCL ++ G    SS+PS SCC + + V
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNG---GSSSPSWSCCRQFSTV 60

Query: 63  VQSQPQCLCSALNGGAAG-GGVTINPTRALALPAACHLQTPPPSRCN 109
           VQS P+CLCS +N   +   G   N T AL LP AC++QTP PS CN
Sbjct: 61  VQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCN 104

[Close]

BLAST of MS020336 vs. TAIR 10
Match: AT5G09370.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 5.4e-11
Identity = 35/100 (35.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 9   VVIVALNIRHQSLGQSLGCTTALISLSPCLNFVTGSSSNSSTPSSSCCSRLANVVQSQPQ 68
           ++++ L++    +  +  C T +I+L PCL F++     + TP++SCCS L N++ ++P 
Sbjct: 10  LLLLVLSVSSPYVHGASDCDTLVITLFPCLPFIS-IGGTADTPTASCCSSLKNILDTKPI 69

Query: 69  CLCSALNGGAAGGGVTINPTRALALPAACHLQTPPPSRCN 109
           CLC  L    A  G+ +N T++  LP AC L  PP S C+
Sbjct: 70  CLCEGLK--KAPLGIKLNVTKSATLPVACKLNAPPVSACD 106

The following BLAST results are available for this feature:

BLAST of MS020336 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146032.1	2.5e-50	100.00	non-specific lipid-transfer protein-like protein At2g13820 [Momordica charantia]	[more]
XP_038888862.1	1.2e-31	72.32	non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]	[more]
XP_022996122.1	1.5e-31	71.17	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima]	[more]
XP_022931068.1	2.0e-31	71.17	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata]	[more]
KAG6606419.1	5.7e-31	70.27	Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrospe...	[more]

BLAST of MS020336 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ86	5.6e-21	47.62	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q2PE59	4.4e-18	44.55	Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3...	[more]
Q7EB72	9.8e-18	46.85	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	1.5e-13	42.06	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q9FY78	7.6e-10	35.00	Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of MS020336 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYC7	1.2e-50	100.00	non-specific lipid-transfer protein-like protein At2g13820 OS=Momordica charanti...	[more]
A0A6J1K123	7.3e-32	71.17	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]
A0A6J1EXB7	9.5e-32	71.17	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]
A0A0A0KGC1	2.6e-29	69.16	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G410100 PE=4 SV...	[more]
A0A1S3BLF1	2.6e-29	64.96	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]

BLAST of MS020336 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22600.1	4.0e-22	47.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	3.1e-19	44.55	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	7.0e-19	46.85	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	1.0e-14	42.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G09370.2	5.4e-11	35.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 84..101 score: 28.46 coord: 26..42 score: 28.69 coord: 50..64 score: 26.67
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..107 e-value: 2.4E-8 score: 43.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 18..107 e-value: 8.6E-16 score: 57.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 25..107 e-value: 9.1E-19 score: 69.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 25..108
None	No IPR available	PANTHER	PTHR33044:SF198	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-LIKE ISOFORM X1	coord: 6..109
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 34..99 e-value: 1.16458E-8 score: 45.8807
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020336.1	MS020336.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding