MS020286 (gene) Bitter gourd (TR) v1

Overview


Name	MS020286
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger protein 3-like
Location	scaffold665: 751308 .. 751778 (-)
RNA-Seq Expression	MS020286
Synteny	MS020286

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAGCTTTGTTGAGCAGTGGGAAGGTGAAGGAGAAATGGGATTGTGTAAAGGAACAAACTTTATGTGATGATCATCAGTTCCCATGGCCTGCAAAAAACTATGCTTGTAATTTTTGCAGGAGAGAATTCAAGTCTGCTCAGGCCCTTGGTGGCCACATGAATGTCCATAGGAGGGACAGGGCAAGATTGAGACTTTTGCCCTCTTGGGTGCCTGAAAATTCTTGCCCTAACCCTAATTTCTATTCTCCACACCCCACTTTCTTCAGCTCAACTTCTTCCTCAGGCCCCCAAACTCACCAAGATCACCGCTTGTGTTTCACCAACCAAAAACATCATGATGAAGATCAAGAAGTTCAAGTTGTGAAGAAGAAGATCAAGAAAAGTTTGGTCAATTTAGAACTCAAGATGGGCATTCATCATTTGGAAGGTTCAAATGAGGATGGCCTCGATTTGGAGCTTCGACTT

mRNA sequence

ATGGATGGAGCTTTGTTGAGCAGTGGGAAGGTGAAGGAGAAATGGGATTGTGTAAAGGAACAAACTTTATGTGATGATCATCAGTTCCCATGGCCTGCAAAAAACTATGCTTGTAATTTTTGCAGGAGAGAATTCAAGTCTGCTCAGGCCCTTGGTGGCCACATGAATGTCCATAGGAGGGACAGGGCAAGATTGAGACTTTTGCCCTCTTGGGTGCCTGAAAATTCTTGCCCTAACCCTAATTTCTATTCTCCACACCCCACTTTCTTCAGCTCAACTTCTTCCTCAGGCCCCCAAACTCACCAAGATCACCGCTTGTGTTTCACCAACCAAAAACATCATGATGAAGATCAAGAAGTTCAAGTTGTGAAGAAGAAGATCAAGAAAAGTTTGGTCAATTTAGAACTCAAGATGGGCATTCATCATTTGGAAGGTTCAAATGAGGATGGCCTCGATTTGGAGCTTCGACTT

Coding sequence (CDS)

ATGGATGGAGCTTTGTTGAGCAGTGGGAAGGTGAAGGAGAAATGGGATTGTGTAAAGGAACAAACTTTATGTGATGATCATCAGTTCCCATGGCCTGCAAAAAACTATGCTTGTAATTTTTGCAGGAGAGAATTCAAGTCTGCTCAGGCCCTTGGTGGCCACATGAATGTCCATAGGAGGGACAGGGCAAGATTGAGACTTTTGCCCTCTTGGGTGCCTGAAAATTCTTGCCCTAACCCTAATTTCTATTCTCCACACCCCACTTTCTTCAGCTCAACTTCTTCCTCAGGCCCCCAAACTCACCAAGATCACCGCTTGTGTTTCACCAACCAAAAACATCATGATGAAGATCAAGAAGTTCAAGTTGTGAAGAAGAAGATCAAGAAAAGTTTGGTCAATTTAGAACTCAAGATGGGCATTCATCATTTGGAAGGTTCAAATGAGGATGGCCTCGATTTGGAGCTTCGACTT

Protein sequence

MDGALLSSGKVKEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHDEDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL

Homology

[Close]

BLAST of MS020286 vs. NCBI nr
Match: XP_022145912.1 (zinc finger protein 3-like [Momordica charantia])

HSP 1 Score: 332.0 bits (850), Expect = 2.7e-87
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MDGALLSSGKVKEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR 60
           MDGALLSSGKVKEKWDCV+EQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR
Sbjct: 1   MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR 60

Query: 61  DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHDEDQEV 120
           DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHD+DQEV
Sbjct: 61  DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHDDDQEV 120

Query: 121 QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
Sbjct: 121 QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 157

[Close]

BLAST of MS020286 vs. NCBI nr
Match: XP_023511420.1 (zinc finger protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-30
Identity = 82/158 (51.90%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 12  KEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSW 71
           + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW
Sbjct: 18  ERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW 77

Query: 72  VPENSCPNPNFYSPHPTFFSSTSSS------------GPQTHQDHRLCFTNQKHHDEDQE 131
           + +NS PNPN      TF  +T++S            G  +  +++  F++Q  HD+   
Sbjct: 78  MADNSYPNPNSCF---TFKLNTNNSLCSNTQEEKKGFGSCSWNNYKPSFSSQDDHDD--V 137

Query: 132 VQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           + V+KKK KK+LVNLELKMG    + SNED LDLEL L
Sbjct: 138 LHVLKKKKKKNLVNLELKMGNLEDDSSNED-LDLELHL 169

[Close]

BLAST of MS020286 vs. NCBI nr
Match: XP_038888773.1 (LOW QUALITY PROTEIN: zinc finger protein 11-like [Benincasa hispida])

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-30
Identity = 94/182 (51.65%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 6   LSSGKVK---EKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDR 65
           + +GK K   ++W  VKE+T    +QF WPAKNY CNFC+REFKSAQALGGHMNVHRRDR
Sbjct: 32  MDNGKQKQQQQQWSYVKEETF-SSNQFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDR 91

Query: 66  ARLRLLPSWVPEN------SCPNPNFYSPHP----------TFFSSTSSSGPQTHQDH-- 125
            R+RLLPSWVP+N      S PNPN  +P+P          TF SS  +S     QD   
Sbjct: 92  TRMRLLPSWVPDNNNNNYYSYPNPN-PNPNPNLSNFSPSCFTFRSSNKNSLSSCPQDQDK 151

Query: 126 ---RLCFTNQKH------HDEDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLEL 158
                C  N  +      HD+D +V  V KK KK LVNLELKMG      SNED LDLEL
Sbjct: 152 KGIGSCSWNNNYKPSSTSHDQDDQVLHVLKKKKKILVNLELKMGNLGDASSNED-LDLEL 210

[Close]

BLAST of MS020286 vs. NCBI nr
Match: KAG6571507.1 (Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011255.1 Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.1 bits (357), Expect = 4.0e-30
Identity = 80/155 (51.61%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 12  KEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSW 71
           + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW
Sbjct: 18  ERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW 77

Query: 72  VPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQDHRLCFTNQKHHDEDQEVQV 131
           + +NS PNPN       + + +  S+T       G  +  +++  F++Q  HD+   + V
Sbjct: 78  MADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPSFSSQDDHDD--VLHV 137

Query: 132 VKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           +KKK KK+LVNLELKMG    + SNED LDLEL L
Sbjct: 138 LKKKKKKNLVNLELKMGNLEDDSSNED-LDLELHL 169

[Close]

BLAST of MS020286 vs. NCBI nr
Match: XP_022963791.1 (zinc finger protein 11-like [Cucurbita moschata])

HSP 1 Score: 141.4 bits (355), Expect = 6.9e-30
Identity = 80/155 (51.61%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 12  KEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSW 71
           + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW
Sbjct: 18  ERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW 77

Query: 72  VPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQDHRLCFTNQKHHDEDQEVQV 131
           + +NS PNPN       + + +  S+T       G  +  +++  F++Q  HD+   + V
Sbjct: 78  MADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPSFSSQDDHDD--VLHV 137

Query: 132 VKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           +KKK KK+LVNLELKMG    + SNED LDLEL L
Sbjct: 138 LKKKKKKNLVNLELKMGNLEDDSSNED-LDLELHL 169

[Close]

BLAST of MS020286 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.7e-20
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 30  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHP 89
           PWP KNY C+FCRREF+SAQALGGHMNVHRRDRA+LR +PSW+  P +  P  N   P+P
Sbjct: 43  PWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN---PNP 102

Query: 90  TFFSSTSSSGPQTHQDHRLCFTNQK 113
            F SS+SSS    H +  L  TNQ+
Sbjct: 103 NFSSSSSSSTTTAHLEPSL--TNQR 122

[Close]

BLAST of MS020286 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.6e-16
Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 29  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPT 88
           F WP ++Y C+FC+REF+SAQALGGHMNVHRRDRARLRL  S    +S P+P +  P+P 
Sbjct: 40  FSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQS-PSSSSTPSPPY--PNPN 99

Query: 89  FFSSTSSSGPQTH 102
           +  ST ++ P  H
Sbjct: 100 YSYSTMANSPPPH 109

[Close]

BLAST of MS020286 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-12
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 31 WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          WP ++Y C+FCRREFKSAQALGGHMNVHRRDRARL+
Sbjct: 34 WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

[Close]

BLAST of MS020286 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 31 WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          WP ++Y+C+FC REFKSAQALGGHMNVHRRDRARL+
Sbjct: 50 WPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLK 85

[Close]

BLAST of MS020286 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 33 AKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          +++Y C+FC R F +AQALGGHMN+HRRDRA+LR
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]

BLAST of MS020286 vs. ExPASy TrEMBL
Match: A0A6J1CY18 (zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111015259 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 155/157 (98.73%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MDGALLSSGKVKEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR 60
           MDGALLSSGKVKEKWDCV+EQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR
Sbjct: 1   MDGALLSSGKVKEKWDCVQEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRR 60

Query: 61  DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHDEDQEV 120
           DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHD+DQEV
Sbjct: 61  DRARLRLLPSWVPENSCPNPNFYSPHPTFFSSTSSSGPQTHQDHRLCFTNQKHHDDDQEV 120

Query: 121 QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL
Sbjct: 121 QVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 157

[Close]

BLAST of MS020286 vs. ExPASy TrEMBL
Match: A0A6J1HH25 (zinc finger protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111463985 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.3e-30
Identity = 80/155 (51.61%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 12  KEKWDCVKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSW 71
           + +W  V +      +QF WPAKNY+CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSW
Sbjct: 18  ERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW 77

Query: 72  VPENSCPNPNF-----YSPHPTFFSSTSSS----GPQTHQDHRLCFTNQKHHDEDQEVQV 131
           + +NS PNPN       + + +  S+T       G  +  +++  F++Q  HD+   + V
Sbjct: 78  MADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPSFSSQDDHDD--VLHV 137

Query: 132 VKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
           +KKK KK+LVNLELKMG    + SNED LDLEL L
Sbjct: 138 LKKKKKKNLVNLELKMGNLEDDSSNED-LDLELHL 169

[Close]

BLAST of MS020286 vs. ExPASy TrEMBL
Match: A0A5D3B8Q5 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00170 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29
Identity = 89/172 (51.74%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 18  VKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-- 77
           VKE T    ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N  
Sbjct: 27  VKEGTF-SSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNY 86

Query: 78  -----SCPNPNFYSPHPTFFSSTSSSG---------PQTHQDHRLCFTN----------- 137
                SCPNPNF +  P+ F+  SSS           Q  ++   C  N           
Sbjct: 87  NNNYYSCPNPNFPNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNYKPSSLFVP 146

Query: 138 ---QKH--HDEDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
              Q+H   D DQ + V KKK KKSLVNLELKMG      SN + LDLEL L
Sbjct: 147 HDDQEHVGDDSDQVLHVFKKK-KKSLVNLELKMGSLGDASSNNEDLDLELHL 196

[Close]

BLAST of MS020286 vs. ExPASy TrEMBL
Match: A0A1S3C0E4 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103495035 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29
Identity = 89/172 (51.74%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 18  VKEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN-- 77
           VKE T    ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N  
Sbjct: 27  VKEGTF-SSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNY 86

Query: 78  -----SCPNPNFYSPHPTFFSSTSSSG---------PQTHQDHRLCFTN----------- 137
                SCPNPNF +  P+ F+  SSS           Q  ++   C  N           
Sbjct: 87  NNNYYSCPNPNFPNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNYKPSSLFVP 146

Query: 138 ---QKH--HDEDQEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
              Q+H   D DQ + V KKK KKSLVNLELKMG      SN + LDLEL L
Sbjct: 147 HDDQEHVGDDSDQVLHVFKKK-KKSLVNLELKMGSLGDASSNNEDLDLELHL 196

[Close]

BLAST of MS020286 vs. ExPASy TrEMBL
Match: A0A0A0L7I0 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G392775 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.3e-28
Identity = 85/171 (49.71%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 19  KEQTLCDDHQFPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPEN--- 78
           KE T    ++F WPAKNY CNFC+REFKSAQALGGHMNVHRRDRAR+RLLPSWV +N   
Sbjct: 59  KEGTF-SSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYN 118

Query: 79  ----SCPNPNFYSPHPTFFSSTSSSG---------PQTHQDHRLCFTN------------ 138
               SCPNPNF +  P+ F+  SSS           Q  ++   C  N            
Sbjct: 119 NNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNIYKPSSLVVP 178

Query: 139 ---QKHHDED-QEVQVVKKKIKKSLVNLELKMGIHHLEGSNEDGLDLELRL 158
              Q+H D+D  +V  V KK KK +VNLELKMG      SN + LDLEL L
Sbjct: 179 HDDQEHVDDDADQVLHVFKKKKKGMVNLELKMGSLGDASSNNEDLDLELHL 228

[Close]

BLAST of MS020286 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 98.2 bits (243), Expect = 6.2e-21
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 30  PWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWV--PENSCPNPNFYSPHP 89
           PWP KNY C+FCRREF+SAQALGGHMNVHRRDRA+LR +PSW+  P +  P  N   P+P
Sbjct: 43  PWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN---PNP 102

Query: 90  TFFSSTSSSGPQTHQDHRLCFTNQK 113
            F SS+SSS    H +  L  TNQ+
Sbjct: 103 NFSSSSSSSTTTAHLEPSL--TNQR 122

[Close]

BLAST of MS020286 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-17
Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 29  FPWPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLRLLPSWVPENSCPNPNFYSPHPT 88
           F WP ++Y C+FC+REF+SAQALGGHMNVHRRDRARLRL  S    +S P+P +  P+P 
Sbjct: 40  FSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQS-PSSSSTPSPPY--PNPN 99

Query: 89  FFSSTSSSGPQTH 102
           +  ST ++ P  H
Sbjct: 100 YSYSTMANSPPPH 109

[Close]

BLAST of MS020286 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 31 WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          WP ++Y C+FCRREFKSAQALGGHMNVHRRDRARL+
Sbjct: 34 WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

[Close]

BLAST of MS020286 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 31 WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          WP ++Y+C+FC REFKSAQALGGHMNVHRRDRARL+
Sbjct: 50 WPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLK 85

[Close]

BLAST of MS020286 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 31 WPAKNYACNFCRREFKSAQALGGHMNVHRRDRARLR 67
          WP ++Y CNFCRREF+SAQALGGHMNVHRRDRA  R
Sbjct: 41 WPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSR 76

The following BLAST results are available for this feature:

BLAST of MS020286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145912.1	2.7e-87	98.73	zinc finger protein 3-like [Momordica charantia]	[more]
XP_023511420.1	1.4e-30	51.90	zinc finger protein 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_038888773.1	2.4e-30	51.65	LOW QUALITY PROTEIN: zinc finger protein 11-like [Benincasa hispida]	[more]
KAG6571507.1	4.0e-30	51.61	Zinc finger protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011...	[more]
XP_022963791.1	6.9e-30	51.61	zinc finger protein 11-like [Cucurbita moschata]	[more]

BLAST of MS020286 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLB8	8.7e-20	60.00	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q38895	7.6e-16	56.16	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	3.0e-12	83.33	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9LHS9	1.5e-11	80.56	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SR34	1.3e-07	67.65	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of MS020286 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY18	1.3e-87	98.73	zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111015259 PE=4 S...	[more]
A0A6J1HH25	3.3e-30	51.61	zinc finger protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111463985 PE=4 S...	[more]
A0A5D3B8Q5	3.7e-29	51.74	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3C0E4	3.7e-29	51.74	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103495035 ...	[more]
A0A0A0L7I0	5.3e-28	49.71	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G392775 P...	[more]

BLAST of MS020286 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42410.1	6.2e-21	60.00	zinc finger protein 11	[more]
AT3G23130.1	5.4e-17	56.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	2.1e-13	83.33	zinc-finger protein 10	[more]
AT5G06070.1	1.1e-12	80.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	1.4e-12	80.56	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 13..67 e-value: 1.3E-5 score: 26.9
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 36..60 e-value: 7.2E-6 score: 25.9
None	No IPR available	PANTHER	PTHR45801:SF64	TRANSCRIPTIONAL REGULATOR SUPERMAN	coord: 14..157
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 14..157
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 11.094336
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 33..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020286.1	MS020286.1	mRNA