MS020285 (gene) Bitter gourd (TR) v1

Overview
NameMS020285
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscriptional regulator SUPERMAN-like
Locationscaffold665: 740156 .. 740698 (-)
RNA-Seq ExpressionMS020285
SyntenyMS020285
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG

mRNA sequence

ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG

Coding sequence (CDS)

ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG

Protein sequence

MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIASGDELCNPQVLNAFKAAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHDR
Homology
BLAST of MS020285 vs. NCBI nr
Match: XP_022145913.1 (transcriptional regulator SUPERMAN-like [Momordica charantia])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN 60
           MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN
Sbjct: 1   MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN 60

Query: 61  IHRKDRVKTKPSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI 120
           IHRKDRVKTKPSPPAAASNSA TLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI
Sbjct: 61  IHRKDRVKTKPSPPAAASNSASTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI 120

Query: 121 ASGDELCNPQVLNAFKAAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD 180
           ASGDELCNPQVLNAFK AENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD
Sbjct: 121 ASGDELCNPQVLNAFKVAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD 180

Query: 181 R 182
           R
Sbjct: 181 R 181

BLAST of MS020285 vs. NCBI nr
Match: KAA0066293.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0

Query: 5   PSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRK 64
           P+  +  A  D  ++S +  +E+D  +N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRK
Sbjct: 7   PTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRK 66

Query: 65  DRVKTK---PSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIA 124
           DRVKTK   PS P   SN +  LRP  +TTT  A   +       +     TWCLG T +
Sbjct: 67  DRVKTKPNTPSKPEPFSNHSSNLRP-MLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 126

Query: 125 SGDE-------LCNPQVLNAFKAAENWTTT-MSLSTRLPGA--------SHSQNNASEPN 182
           S            NPQVLN FK  +NWTTT MSL+++              S  N  +  
Sbjct: 127 SPPHDHQFSYVHNNPQVLNTFK-DQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDE 186

BLAST of MS020285 vs. NCBI nr
Match: XP_016901597.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0

Query: 5   PSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRK 64
           P+  +  A  D  ++S +  +E+D  +N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRK
Sbjct: 7   PTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRK 66

Query: 65  DRVKTK---PSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIA 124
           DRVKTK   PS P   SN +  LRP  +TTT  A   +       +     TWCLG T +
Sbjct: 67  DRVKTKPNTPSKPEPFSNHSSNLRP-MLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 126

Query: 125 SGDE-------LCNPQVLNAFKAAENWTTT-MSLSTRLPGA--------SHSQNNASEPN 182
           S            NPQVLN FK  +NWTTT MSL+++              S  N  +  
Sbjct: 127 SPPHDHQFSYVHNNPQVLNTFK-DQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDE 186

BLAST of MS020285 vs. NCBI nr
Match: XP_004149183.1 (transcriptional regulator SUPERMAN [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 9.7e-28
Identity = 94/204 (46.08%), Postives = 117/204 (57.35%), Query Frame = 0

Query: 2   DHNPSGN--SATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHM 61
           DH P+    +AT   D  ++S    +++D  +N+MG+GRSYECVFCKRGFTTAQALGGHM
Sbjct: 4   DHIPTTTTIAATTTTDQDQSSKPTTEDTDQINNEMGSGRSYECVFCKRGFTTAQALGGHM 63

Query: 62  NIHRKDRVKTK---PSPPAAASNSAFTLRPNPVTT---THPAPHHALSMPSPDFRAVGPT 121
           NIHRKDRVK K   PS P   +N + TLRP   TT   T  + H +     P       T
Sbjct: 64  NIHRKDRVKNKPNTPSKPEPFTNHSSTLRPMLTTTAAVTTVSHHQSFQTYFP----TSST 123

Query: 122 WCLGPTIASGDE-------LCNPQVLNAFKAAENWTTT-MSLSTRLPGA--------SHS 181
           WCLG T +S            NPQVLN FK  +NWTTT MSL+++              S
Sbjct: 124 WCLGTTTSSPPHDHQFSYVHNNPQVLNTFK-DQNWTTTNMSLASQSSPTLALSDGRDKRS 183

BLAST of MS020285 vs. NCBI nr
Match: XP_038888824.1 (protein LATE FLOWERING-like [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-27
Identity = 93/202 (46.04%), Postives = 116/202 (57.43%), Query Frame = 0

Query: 2   DHNPSGNSAT-ADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN 61
           +H P+  + T   ++  ++S +  +E+D  SN+MG+GRSYECVFCKRGFTTAQALGGHMN
Sbjct: 4   NHIPTTTAVTVTTEEEDQSSKTTTEETDQISNEMGSGRSYECVFCKRGFTTAQALGGHMN 63

Query: 62  IHRKDRVKTK---PSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLG 121
           IHRKDRVKTK   PS P   +N   TLRP  +TTT     H  S  +  +     TWCLG
Sbjct: 64  IHRKDRVKTKPNTPSKPEPFNNHPSTLRPT-LTTTATTISHPQSFQT--YFPTSSTWCLG 123

Query: 122 PT--------IASGDELCNPQVLNAFKAAENW-TTTMSLSTRLPGASHS---------QN 181
            T         +   +  NPQVLN  K  +NW TT MSL++ L     S          N
Sbjct: 124 TTTPPPHDHQFSYVHDNNNPQVLNTLK-DQNWMTTNMSLASWLSPTLASIDRRDKRSDGN 183

BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0

Query: 38  RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASNSAFTLRPNP-----VTTT 97
           RSY C FCKR F +AQALGGHMN+HR+DR + +     ++S++     PNP         
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 98  HPAPHHA-------LSMP-SPDFRAVGPTWCLGP-TIASGDELCNPQ----VLNAFKAAE 157
            P PHH+       LS P SP +RA G    L P +  + +  C  +    ++ A +A  
Sbjct: 105 SPPPHHSPLTLFPTLSPPSSPRYRA-GLIRSLSPKSKHTPENACKTKKSSLLVEAGEATR 164

Query: 158 NWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLG 179
             +       R       +      N  E +LDLELRLG
Sbjct: 165 FTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-07
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 4  NPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHR 63
          NP  N+    D   KNS    D+S      +   RSY C FC RGF+ AQALGGHMNIHR
Sbjct: 6  NPK-NADDCSDSISKNSHQGVDDS------LNQSRSYVCSFCIRGFSNAQALGGHMNIHR 65

Query: 64 KDRVKTK 71
          +DR K +
Sbjct: 66 RDRAKLR 65

BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 17 KKNSSSAADE----SDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTK 71
          K N  S+ +E     D A+  +   RSY C FC+R F +AQALGGHMN+HR+DR + K
Sbjct: 12 KSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.8e-07
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0

Query: 38  RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASNSAFTLRPNPVTTTHPAPH 97
           ++Y C FC+R F +AQALGGHMN+HR+DR K               LR  P     P  H
Sbjct: 47  KNYTCSFCRREFRSAQALGGHMNVHRRDRAK---------------LRQIPSWLFEPHHH 101

Query: 98  HALSMPSPDF 108
             ++ P+P+F
Sbjct: 107 TPIANPNPNF 101

BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 34/99 (34.34%), Postives = 46/99 (46.46%), Query Frame = 0

Query: 35  GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASN---------SAFTLR 94
           G  R YEC +C R F  +QALGGH N H+K+R + K +   A  N         SA    
Sbjct: 68  GGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFL 127

Query: 95  PNPVTTTHPAPHHALS---MPSPDFRAVGPTWCLGPTIA 122
            NP+ +    P H LS   +P P    +G  W   P ++
Sbjct: 128 RNPIVSAFAPPPHLLSSSAVPQP----MGGPWMYLPRVS 162

BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1CX78 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015260 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.2e-96
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0

Query: 1   MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN 60
           MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN
Sbjct: 1   MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMN 60

Query: 61  IHRKDRVKTKPSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI 120
           IHRKDRVKTKPSPPAAASNSA TLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI
Sbjct: 61  IHRKDRVKTKPSPPAAASNSASTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTI 120

Query: 121 ASGDELCNPQVLNAFKAAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD 180
           ASGDELCNPQVLNAFK AENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD
Sbjct: 121 ASGDELCNPQVLNAFKVAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHD 180

Query: 181 R 182
           R
Sbjct: 181 R 181

BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A5A7VDP2 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003440 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 8.5e-30
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0

Query: 5   PSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRK 64
           P+  +  A  D  ++S +  +E+D  +N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRK
Sbjct: 7   PTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRK 66

Query: 65  DRVKTK---PSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIA 124
           DRVKTK   PS P   SN +  LRP  +TTT  A   +       +     TWCLG T +
Sbjct: 67  DRVKTKPNTPSKPEPFSNHSSNLRP-MLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 126

Query: 125 SGDE-------LCNPQVLNAFKAAENWTTT-MSLSTRLPGA--------SHSQNNASEPN 182
           S            NPQVLN FK  +NWTTT MSL+++              S  N  +  
Sbjct: 127 SPPHDHQFSYVHNNPQVLNTFK-DQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDE 186

BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A1S4E031 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103494911 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 8.5e-30
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0

Query: 5   PSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRK 64
           P+  +  A  D  ++S +  +E+D  +N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRK
Sbjct: 7   PTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRK 66

Query: 65  DRVKTK---PSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIA 124
           DRVKTK   PS P   SN +  LRP  +TTT  A   +       +     TWCLG T +
Sbjct: 67  DRVKTKPNTPSKPEPFSNHSSNLRP-MLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 126

Query: 125 SGDE-------LCNPQVLNAFKAAENWTTT-MSLSTRLPGA--------SHSQNNASEPN 182
           S            NPQVLN FK  +NWTTT MSL+++              S  N  +  
Sbjct: 127 SPPHDHQFSYVHNNPQVLNTFK-DQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDE 186

BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1JZP2 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491156 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.7e-27
Identity = 92/205 (44.88%), Postives = 112/205 (54.63%), Query Frame = 0

Query: 8   NSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRV 67
           N    DDD   NS +  +E + A N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRKDRV
Sbjct: 4   NHIPNDDDQDPNSKTTTEEVEQA-NEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRV 63

Query: 68  KTKPSPPAAASNSA------FTLRPNP--VTTTHPAPHHALSMPSPDFRAVGPTWCLGPT 127
           KTKP+ P    +         TLRP    ++T+H   HH+     P       TWCLG T
Sbjct: 64  KTKPNTPNNNPSKPEPFAHHSTLRPTTPLISTSH---HHSFQTYFP----TSSTWCLGST 123

Query: 128 IA----------------SGDELCNPQVLNAFKAAENWTTTMSLSTRLPGAS-------H 182
                             + +   +PQ LNAFK  ENW T +SL +R P  +        
Sbjct: 124 TTPSHDHQLAYLHNNLNINNNNNNSPQGLNAFK--ENW-TNISLPSRSPDPTLINRQDKR 183

BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1EXQ3 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111437442 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 7.5e-26
Identity = 95/217 (43.78%), Postives = 117/217 (53.92%), Query Frame = 0

Query: 8   NSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRV 67
           N    DDD   NS +  +E + A N+MG+GRSYECVFCKRGFTTAQALGGHMNIHRKDRV
Sbjct: 4   NHIPNDDDQDPNSKTTTEEVEQA-NEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRV 63

Query: 68  KTKPS--------PPAAASNSAFTLRPNP--VTTTHPAPHHALSMPSPDFRAVGPTWCLG 127
           KTKP+        P   A +S  TLRP    ++T+H   HH+     P       TWCLG
Sbjct: 64  KTKPNTTNNSPSKPEPFAHHS--TLRPTTPLISTSH---HHSFQTYFP----TSSTWCLG 123

Query: 128 PTIA--------------------SGDELCNPQVLNAFKAAENWTTTMSLSTRLPGAS-- 182
            T                      + +   +PQ LNAFK  ENW T +SL +R P  +  
Sbjct: 124 STTTTTTTPSPDHQLAYVHNNLNINNNNNSSPQALNAFK--ENW-TNISLPSRTPAPALI 183

BLAST of MS020285 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0

Query: 38  RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASNSAFTLRPNP-----VTTT 97
           RSY C FCKR F +AQALGGHMN+HR+DR + +     ++S++     PNP         
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSYSTMAN 104

Query: 98  HPAPHHA-------LSMP-SPDFRAVGPTWCLGP-TIASGDELCNPQ----VLNAFKAAE 157
            P PHH+       LS P SP +RA G    L P +  + +  C  +    ++ A +A  
Sbjct: 105 SPPPHHSPLTLFPTLSPPSSPRYRA-GLIRSLSPKSKHTPENACKTKKSSLLVEAGEATR 164

Query: 158 NWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLG 179
             +       R       +      N  E +LDLELRLG
Sbjct: 165 FTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

BLAST of MS020285 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 8.2e-09
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 15 DSKKNSSSAADE--------SDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDR 68
          + +++SSS + E        +  +S    T R YEC FCKRGFT AQALGGHMNIHR+DR
Sbjct: 2  ECERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDR 61

BLAST of MS020285 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0

Query: 38 RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTK 71
          R Y C FC+RGF+ AQALGGHMNIHRKDR K +
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLR 51

BLAST of MS020285 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 4  NPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHR 63
          NP  N+    D   KNS    D+S      +   RSY C FC RGF+ AQALGGHMNIHR
Sbjct: 6  NPK-NADDCSDSISKNSHQGVDDS------LNQSRSYVCSFCIRGFSNAQALGGHMNIHR 65

Query: 64 KDRVKTK 71
          +DR K +
Sbjct: 66 RDRAKLR 65

BLAST of MS020285 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-08
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query: 17 KKNSSSAADE----SDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTK 71
          K N  S+ +E     D A+  +   RSY C FC+R F +AQALGGHMN+HR+DR + K
Sbjct: 12 KSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLK 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145913.11.1e-9598.90transcriptional regulator SUPERMAN-like [Momordica charantia][more]
KAA0066293.11.8e-2946.94transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa][more]
XP_016901597.11.8e-2946.94PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
XP_004149183.19.7e-2846.08transcriptional regulator SUPERMAN [Cucumis sativus][more]
XP_038888824.13.7e-2746.04protein LATE FLOWERING-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q388952.1e-0933.96Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
Q9SR343.4e-0749.25Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
O809425.7e-0748.28Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
Q9SLB89.8e-0740.00Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
Q9C9H11.4e-0534.34Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CX785.2e-9698.90transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A5A7VDP28.5e-3046.94Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S4E0318.5e-3046.94transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103494911 ... [more]
A0A6J1JZP26.7e-2744.88transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491... [more]
A0A6J1EXQ37.5e-2643.78transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
Match NameE-valueIdentityDescription
AT3G23130.11.5e-1033.96C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G43540.18.2e-0950.82C2H2 and C2HC zinc fingers superfamily protein [more]
AT3G53820.11.1e-0872.73C2H2 and C2HC zinc fingers superfamily protein [more]
AT3G09290.12.4e-0849.25telomerase activator1 [more]
AT2G37740.14.1e-0848.28zinc-finger protein 10 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 14..83
e-value: 3.2E-6
score: 28.9
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 40..64
e-value: 1.5E-5
score: 24.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..98
NoneNo IPR availablePANTHERPTHR45801:SF51TRANSCRIPTIONAL REGULATOR TAC1-LIKEcoord: 13..180
NoneNo IPR availablePANTHERPTHR45801OS07G0101800 PROTEINcoord: 13..180
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..62
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..67
score: 10.65789
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 38..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS020285.1MS020285.1mRNA