MS020285 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG ATGGACCATAACCCTTCTGGTAATTCCGCCACCGCCGACGACGACTCCAAAAAAAACTCCTCGAGCGCCGCCGACGAATCGGACCACGCCAGCAACGACATGGGCACGGGGCGCTCCTACGAGTGCGTGTTCTGCAAGCGCGGGTTCACGACGGCTCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAAGACCGAGTCAAGACCAAGCCCTCGCCTCCCGCCGCCGCCTCCAACTCCGCCTTCACTCTCCGCCCCAACCCAGTCACCACGACCCATCCCGCACCGCATCACGCCCTTTCCATGCCTTCGCCGGACTTCCGTGCCGTGGGCCCCACCTGGTGTCTGGGCCCCACAATTGCCTCAGGCGATGAATTGTGCAATCCGCAGGTTTTGAATGCATTCAAGGCGGCCGAGAATTGGACCACCACCATGAGCCTCTCCACGCGCTTGCCCGGCGCGTCCCACTCACAAAACAACGCATCGGAACCCAATGCCGAAGAAGATGAACTTGATTTGGAGCTCCGCCTCGGCCATGATCGG MDHNPSGNSATADDDSKKNSSSAADESDHASNDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPSPPAAASNSAFTLRPNPVTTTHPAPHHALSMPSPDFRAVGPTWCLGPTIASGDELCNPQVLNAFKAAENWTTTMSLSTRLPGASHSQNNASEPNAEEDELDLELRLGHDR Homology
BLAST of MS020285 vs. NCBI nr
Match: XP_022145913.1 (transcriptional regulator SUPERMAN-like [Momordica charantia]) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95 Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of MS020285 vs. NCBI nr
Match: KAA0066293.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29 Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0
BLAST of MS020285 vs. NCBI nr
Match: XP_016901597.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29 Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0
BLAST of MS020285 vs. NCBI nr
Match: XP_004149183.1 (transcriptional regulator SUPERMAN [Cucumis sativus]) HSP 1 Score: 134.4 bits (337), Expect = 9.7e-28 Identity = 94/204 (46.08%), Postives = 117/204 (57.35%), Query Frame = 0
BLAST of MS020285 vs. NCBI nr
Match: XP_038888824.1 (protein LATE FLOWERING-like [Benincasa hispida]) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-27 Identity = 93/202 (46.04%), Postives = 116/202 (57.43%), Query Frame = 0
BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.4e-07 Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 9.8e-07 Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of MS020285 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05 Identity = 34/99 (34.34%), Postives = 46/99 (46.46%), Query Frame = 0
BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1CX78 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015260 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 5.2e-96 Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A5A7VDP2 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003440 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 8.5e-30 Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0
BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A1S4E031 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103494911 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 8.5e-30 Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 0
BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1JZP2 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491156 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 6.7e-27 Identity = 92/205 (44.88%), Postives = 112/205 (54.63%), Query Frame = 0
BLAST of MS020285 vs. ExPASy TrEMBL
Match: A0A6J1EXQ3 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111437442 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 7.5e-26 Identity = 95/217 (43.78%), Postives = 117/217 (53.92%), Query Frame = 0
BLAST of MS020285 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of MS020285 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-09 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of MS020285 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08 Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
BLAST of MS020285 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 ) HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08 Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of MS020285 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 55.8 bits (133), Expect = 4.1e-08 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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