MS020284 (gene) Bitter gourd (TR) v1

Overview


Name	MS020284
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	bet1-like SNARE 1-1
Location	scaffold665: 732530 .. 733356 (+)
RNA-Seq Expression	MS020284
Synteny	MS020284

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTAGAGTGCAGGGAAATGCGCAACAACAGGGTTGCTCTCTTCGATGGCATCGAGGAGGGTGGCGTTAGGGCTTCATCTTCATTCTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGTTTGCAAGACAGAGTCCTCCTATTGAAAAGGGTATTACTTGCTTACCCAGCCTGAGTCATTAATTGCAGATGTTCCGGTTTTGGGTAGGAACAGACTCTGCACCTATAATATGCTGCAATTATTGTCGAGTGTGTAGACGATGATAAAATTATATCCGATCACTTTATATCCTTTGACTATATGTCGTACAAGAACTCACAAGATGGGGTAGATTAAATATGTGTGATGATTAGAAAGCATAAACTATGCTATTTTTTAGTCTCGATAGATATTTTTTCGTCGAATCACATACAACAAATTGAAAGATGTTATTGGTGACAGTTGACAGGGGACATAAATGAGGAGGTGGAGAGTCATAACCGGATGCTGGATAGGATGGTATGTCAACTTAATTGCCTTACAATAATTGATGCGTAGTTGTTGTTATGTTATTATAAAATCAGACTAGATCCTTGCATCTTTTTATTCAGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTGCCCTGTTTCTCAAGAACGGTTTGTTCCATTCTTTTCATTGTTATAGACATTCATTTAGATCAATTATAGGTATTCGATCCCAAGTCAAGCCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGA

mRNA sequence

CTCTTAGAGTGCAGGGAAATGCGCAACAACAGGGTTGCTCTCTTCGATGGCATCGAGGAGGGTGGCGTTAGGGCTTCATCTTCATTCTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGTTTGCAAGACAGAGTCCTCCTATTGAAAAGGTTGACAGGGGACATAAATGAGGAGGTGGAGAGTCATAACCGGATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTCGATCCCAAGTCAAGCCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGA

Coding sequence (CDS)

CTCTTAGAGTGCAGGGAAATGCGCAACAACAGGGTTGCTCTCTTCGATGGCATCGAGGAGGGTGGCGTTAGGGCTTCATCTTCATTCTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTGGAAGGTTTGCAAGACAGAGTCCTCCTATTGAAAAGGTTGACAGGGGACATAAATGAGGAGGTGGAGAGTCATAACCGGATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTCGATCCCAAGTCAAGCCCGAAGATGTTCTCACTAGTCGCACTTTTCGTGACAATTTTCTTCATCGTGTACTATCTCACAAGA

Protein sequence

LLECREMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR

Homology

[Close]

BLAST of MS020284 vs. NCBI nr
Match: XP_022146012.1 (bet1-like SNARE 1-1 [Momordica charantia] >XP_022146013.1 bet1-like SNARE 1-1 [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-56
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFV IFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. NCBI nr
Match: XP_038887294.1 (bet1-like SNARE 1-1 [Benincasa hispida] >XP_038887295.1 bet1-like SNARE 1-1 [Benincasa hispida])

HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55
Identity = 115/119 (96.64%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL+GLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALDGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFV IFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. NCBI nr
Match: XP_004151976.1 (bet1-like SNARE 1-1 [Cucumis sativus] >XP_031737674.1 bet1-like SNARE 1-1 [Cucumis sativus] >KGN57937.1 hypothetical protein Csa_009991 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRAS S+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFVTIFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. NCBI nr
Match: XP_008454511.1 (PREDICTED: bet1-like SNARE 1-1 [Cucumis melo] >KAA0066289.1 bet1-like SNARE 1-1 [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.4e-54
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFVTIFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. NCBI nr
Match: XP_022963635.1 (bet1-like SNARE 1-1 [Cucurbita moschata] >XP_022967416.1 bet1-like SNARE 1-1 [Cucurbita maxima] >XP_023553595.1 bet1-like SNARE 1-1 [Cucurbita pepo subsp. pepo] >KAG6571509.1 Bet1-like SNARE 1-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011257.1 Bet1-like SNARE 1-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 7.0e-54
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFV IFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVAIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. ExPASy Swiss-Prot
Match: Q9M2J9 (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-43
Identity = 90/119 (75.63%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE R  R +LFDGIEEGG+RA+SS+ SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV
Sbjct: 5   REPRGGRSSLFDGIEEGGIRAASSY-SHEINEHENERALEGLQDRVILLKRLSGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M +LVA FV +F ++YYLTR
Sbjct: 65  DTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYLTR 122

[Close]

BLAST of MS020284 vs. ExPASy Swiss-Prot
Match: Q94CG2 (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-30
Identity = 71/122 (58.20%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 5   REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDIN 64
           RE R +R +LF   DG+EEG +RASSS++    +E DN+ ALE LQDRV  LKR+TGDI+
Sbjct: 5   RENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVTGDIH 64

Query: 65  EEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYL 124
           EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+ K   L+A FV +F I+YYL
Sbjct: 65  EEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYYL 123

[Close]

BLAST of MS020284 vs. ExPASy Swiss-Prot
Match: O35152 (BET1-like protein OS=Rattus norvegicus OX=10116 GN=Bet1l PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.3e-06
Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 24  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRG 83
           RA SS +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G
Sbjct: 6   RAQSSGAVEEIVDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRYLDGMDSDFTSVTG 65

Query: 84  VLSGTMDRFKTVFDPKSSPK--MFSLVALFVTIFFIVYYL 122
           +L+G++ RF TV       +  +  +  + +  FFI+ YL
Sbjct: 66  LLTGSVKRFSTVARSGRDTRKLLCGMAVVLIVAFFILSYL 105

[Close]

BLAST of MS020284 vs. ExPASy Swiss-Prot
Match: Q5RBX2 (BET1-like protein OS=Pongo abelii OX=9601 GN=BET1L PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-06
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 24  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRG 83
           RA S  +  EI + +N+   + L  +V  LK L  DI+++ E  NR LD M +D  S  G
Sbjct: 6   RAQSPGAVEEILDRENKRMADNLASKVTRLKSLALDIDKDAEDQNRYLDGMDSDFTSMTG 65

Query: 84  VLSGTMDRFKTVF-DPKSSPKMF--SLVALFVTIFFIVYYLTR 124
           +L+G++ RF T+    + + K+     V L V  F + Y+L+R
Sbjct: 66  LLTGSVKRFSTMARSGRDNRKLLCGMAVGLIVAFFILSYFLSR 108

[Close]

BLAST of MS020284 vs. ExPASy Swiss-Prot
Match: Q3MHP8 (BET1-like protein OS=Bos taurus OX=9913 GN=BET1L PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 35/100 (35.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 24  RASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRG 83
           RA S  +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G
Sbjct: 6   RAQSPGAVEEILDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRYLDGMDSDFTSMTG 65

Query: 84  VLSGTMDRFKTVF-DPKSSPKMFSLVAL-FVTIFFIVYYL 122
           +L+G++ RF T+    + + K+   VA+  +  FFI+ YL
Sbjct: 66  LLTGSVKRFSTMARSGRDNRKLLCGVAVGLIVAFFILSYL 105

[Close]

BLAST of MS020284 vs. ExPASy TrEMBL
Match: A0A6J1CYB1 (bet1-like SNARE 1-1 OS=Momordica charantia OX=3673 GN=LOC111015324 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFV IFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. ExPASy TrEMBL
Match: A0A0A0LBA5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398950 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 115/119 (96.64%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRAS S+SSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASPSYSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFVTIFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. ExPASy TrEMBL
Match: A0A5A7VLV2 (Bet1-like SNARE 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003400 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFVTIFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. ExPASy TrEMBL
Match: A0A1S3BYS3 (bet1-like SNARE 1-1 OS=Cucumis melo OX=3656 GN=LOC103494910 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRAS S++SHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASPSYTSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFVTIFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVTIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. ExPASy TrEMBL
Match: A0A6J1HRZ5 (bet1-like SNARE 1-1 OS=Cucurbita maxima OX=3661 GN=LOC111466952 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.4e-54
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEV
Sbjct: 5   RELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS PKMFSLVALFV IFFIVYYLTR
Sbjct: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVALFVAIFFIVYYLTR 123

[Close]

BLAST of MS020284 vs. TAIR 10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A )

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-44
Identity = 90/119 (75.63%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 5   REMRNNRVALFDGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDINEEV 64
           RE R  R +LFDGIEEGG+RA+SS+ SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV
Sbjct: 5   REPRGGRSSLFDGIEEGGIRAASSY-SHEINEHENERALEGLQDRVILLKRLSGDINEEV 64

Query: 65  ESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYLTR 124
           ++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KSS +M +LVA FV +F ++YYLTR
Sbjct: 65  DTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYLTR 122

[Close]

BLAST of MS020284 vs. TAIR 10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31
Identity = 71/122 (58.20%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 5   REMRNNRVALF---DGIEEGGVRASSSFSSHEIEEHDNEAALEGLQDRVLLLKRLTGDIN 64
           RE R +R +LF   DG+EEG +RASSS++    +E DN+ ALE LQDRV  LKR+TGDI+
Sbjct: 5   RENRASRTSLFDGLDGLEEGRLRASSSYAH---DERDNDEALENLQDRVSFLKRVTGDIH 64

Query: 65  EEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVTIFFIVYYL 124
           EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+ KS+ K   L+A FV +F I+YYL
Sbjct: 65  EEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYYL 123

The following BLAST results are available for this feature:

BLAST of MS020284 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146012.1	5.7e-56	99.16	bet1-like SNARE 1-1 [Momordica charantia] >XP_022146013.1 bet1-like SNARE 1-1 [M...	[more]
XP_038887294.1	6.3e-55	96.64	bet1-like SNARE 1-1 [Benincasa hispida] >XP_038887295.1 bet1-like SNARE 1-1 [Ben...	[more]
XP_004151976.1	1.1e-54	96.64	bet1-like SNARE 1-1 [Cucumis sativus] >XP_031737674.1 bet1-like SNARE 1-1 [Cucum...	[more]
XP_008454511.1	2.4e-54	95.80	PREDICTED: bet1-like SNARE 1-1 [Cucumis melo] >KAA0066289.1 bet1-like SNARE 1-1 ...	[more]
XP_022963635.1	7.0e-54	95.80	bet1-like SNARE 1-1 [Cucurbita moschata] >XP_022967416.1 bet1-like SNARE 1-1 [Cu...	[more]

BLAST of MS020284 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J9	2.0e-43	75.63	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1	[more]
Q94CG2	2.5e-30	58.20	Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4	[more]
O35152	4.3e-06	34.00	BET1-like protein OS=Rattus norvegicus OX=10116 GN=Bet1l PE=1 SV=1	[more]
Q5RBX2	7.3e-06	33.98	BET1-like protein OS=Pongo abelii OX=9601 GN=BET1L PE=3 SV=1	[more]
Q3MHP8	2.8e-05	35.00	BET1-like protein OS=Bos taurus OX=9913 GN=BET1L PE=3 SV=1	[more]

BLAST of MS020284 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYB1	2.8e-56	99.16	bet1-like SNARE 1-1 OS=Momordica charantia OX=3673 GN=LOC111015324 PE=4 SV=1	[more]
A0A0A0LBA5	5.2e-55	96.64	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A5A7VLV2	1.2e-54	95.80	Bet1-like SNARE 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G0...	[more]
A0A1S3BYS3	1.2e-54	95.80	bet1-like SNARE 1-1 OS=Cucumis melo OX=3656 GN=LOC103494910 PE=4 SV=1	[more]
A0A6J1HRZ5	3.4e-54	95.80	bet1-like SNARE 1-1 OS=Cucurbita maxima OX=3661 GN=LOC111466952 PE=4 SV=1	[more]

BLAST of MS020284 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58170.1	1.4e-44	75.63	BET1P/SFT1P-like protein 14A	[more]
AT4G14455.1	1.8e-31	58.20	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 28..95 e-value: 9.0E-4 score: 28.5
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 33..95 score: 11.846307
None	No IPR available	GENE3D	1.20.5.110		coord: 41..103 e-value: 2.0E-14 score: 55.3
None	No IPR available	PANTHER	PTHR12791:SF46	BET1-LIKE SNARE 1-1	coord: 3..123
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 29..95
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 3..123
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 36..94 e-value: 5.14462E-20 score: 75.2318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020284.1	MS020284.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane