MS020117 (gene) Bitter gourd (TR) v1

Overview


Name	MS020117
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-binding protein RHL1
Location	scaffold22: 1836288 .. 1840692 (-)
RNA-Seq Expression	MS020117
Synteny	MS020117

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGAGGGTCATCGTCTTCGAAGAGGGAAGCAACAAACGGAGAGCTCGACCCGGAGGCTGCAACTCGTAAGCGGCTCAAGAAGCTCGCCTTCTCCAACAACGTACTCTCCCAAACCCAGGCAAAGCCTCAGGCGTATCTGAGCCCTTCGGCGACGGTTCTCAAACACCATGGCAAAGATATTGTTAAGAAATCTCAGCGAAAGAACAGGTTCCTTTTCTCGTTTTCCGGCTTGCTCACTCCCGTCAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCTATTCTCTATCTCGATTTTCCTCAGGTTTATACTGCCTTATTCACTTATGTCTTCCGATTGGGTGTGGTTTTTACTATGAATGGAGGTGCTTGTTCAGTGTAATGATGGTTTAGATAGTGCATTACTAACTTGATTGTCATTTTCATTAATTCCTTATGAATTTGGTAGAAAGACCCGATCTAACGTCTCCAGGTTTCTCCCATGTTACTTCTATACCTACTTTCGCCTTCTGGATTCTGCAAAACGGTCTGAGAAGAGAAGTTGTATTTTCGTGGGAAATAGATTTGGTAAACTTGGAAGGATAGGCGTCGTGAACTAGAAAAGATTAGTCTAATAAGTTTACGTTACTTGCGGTTCCAGTGATTTTTTTTCCTGATTGTATCCTGGTTTTAGTCTAATAAGAGAAAATTAGGTGCTCAGTTAGTATTTTAGTCCATCATTAAGCTCATTTGACTACGGTAGCTTTAAAGCGAACTACATATGTGATGATTGTTGTTGTTATTGGCTTATTAGTTACGTTTATTTGGAAAATGGATGCACAAGGATATGGTTCCGTTATTTTGAGGTGTACATTGCCTTCCTTATGTTTCCAAAAATATCCATTGTTTTATTTCGTAAATGCTGATGTAGATTTTATGTGGTCATCATGCATCTAGTGGTGGAGTCATTCTTACTTATATTTCTTTTACTTTTCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACATGTGAAGATTATTTTGATAGTATGGTTAGTCTTTTTGCTTTTCATTCTTTTCCTTCCTTTTCCAGGAACTTTTTTTCAATTCATTTTCATTTAGTATTTCAATGAAATAAGCTTTCTATGCATGTACGTTGTGAATCAACCAGACTTTTCTCTTACTGCAGGTTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAAGCTCGTCTTGATATTCCTAAAGAATTGACTACAGTATGTTTCTTGATAACTTTTAGGCTCTTAAAATGCATACTAATTTCGTTTCTTGAGTACCCCTACATTTTCCATGTATGATTCTGTGAGGATCTCAGTTTTCAGATCATTTATGTAGCAAAATATTAATAATAATAATAATTATTTTTTAATGGAGTAGATCGGGAGTATTAGTGATGGCAGTAAACATGCTGTAACAGATAAACATTTCATCAAAGAAATATAGACTATAAAATCATCTCCCTCATCTATAGTTTTCACTCCTTTAGGTTACAAAGTACAGAAATTGTTACAACAGCTCAATCCAAAATCAATTTTGAAGAATTAAAACCCAAGCTTGGGTCAATCTACATATATAACCTAGTTTGAAGGGGAGCGGTGAAATTATCCATTGGGCCTTACTTTGGCCAAATATCCTTGCCCTACGTTATCGTTGGATTCATATTTGTATACTTATTCTTTTATTTTGTAGAGCTGATTTTTCCTTTTTTATTATATTCTTTTCCTCTCAGACACTCTTTACCATTTGTAATTAGCTAGTACAAATTCCAAAGCTGTACCTCCGGATTGATGAGATACAGAAATACACATTCTCCTTTTAATGCTTCACTTTGTGTTTCAATTACTTACAACTGGGGGCTTATATATAAAGCTTCTTGTATGGTTCTTTTGGTGGGTACACTCTTATTTTATTTGGTTTCTTTTCTTTCGAGCTGGTGCTGTTTTGCCAGCTTTACTATTGTACTTCCATTTTTTAAACTGAAGTTGAACTTGAGAGAGAGAGATAGAGAGGATATTTGCTAACTCCTAGCTGTTATATGTTAGGGAAAATGTGGAGAATACGACTTCAACGGTGGTGCTGGCGTTACAAGTACGAGTAAGCATAGTGTTCAAAAGAAGGGAATCAATCATGCCGAAGAACATTCTCATAAAGGAGAACGTGGAGATGGCTTAGCGGACCTTGAAGACAACATGATAAATTCAATAAACACTACACCAGTTAGACATTCTGAAAGATCTGCTGGAAAAGTGTTCAAGTATTACCCTTTGCACATGGTTTTACTACATAAATATTATCTCACTATCAATAAGTTAGGAAGAAACAGCGTTTCTTGTCAAATAATATTATGCTGCATGACTTGACCATAATTATAGATATATGTCTGGCACTTCTTAAGATTTGCGACTTTAAAAGTTTAGACTTCAAAATCTGTATCTAAAATGTTCCACATGTATTTAGCTTGTCTTGGGTTTTCTTAGGTGGTCTCTATTTCAAAGAGAGAACATTCTATGGGTTTGTTGTGTATGCTGTTTTTTTGAGAGGTGTGGTTGCAAAGAAATTGAAGAGTCTTCCAATAAATGAGAGATCTTGAAAGGGAGTGAGGGATCTTATTAGTCTATTGCCCACTATTAGGCTTCTGATACGTCCTGAACTTGAGATTGAGACTGGAAACTAAGAAACTCGCGGTTGAAATGTATCATCTTATGGAAGGAAAATACAAAGGCTTACTAGGCATTTGACAGGCTTACTTCTCTCCCTATACTATTTGCAAAATATGTCTATACCCCACCTCTCTGAACCATTATTTATAACCACTGTTCCTTTATGTATGTATGTATGTACAAACATGTGTGTGTATATATATACCGTGAATGTCTAGCTTAGCTTGCATGCATCACTACTAGTATTCCTAACAGCTTCTCTGGCTAAATATTTTTTAATTAACTTATTTCTATGGTCTTAGCTAAATGGGGAGCCTTTTTAATTCTGGCTTTTGGGAGGGTTTTATCTTAGGTTATTTATTTTGTTTATGAATGAGATTAATTTCCTTTAAAATTTTTCACGTTAAAATTCTTCACACTCTTGGAGAATGTGCCACAAGTTTGCACTATTGTGTTATCATTGGTCCAATCTACAGCCTTCATCTTATCCAGAAAAAAAAGATCTACAGCCTTCTATTTTTCCTAAATCCTAACATAGTAGGATCAATTTCCCAAGATCAGTTTCCTGTATGGGAAATTTACAGAAACAAACTAGAAATTGGGAAGGCTATCAGTACAAATACCCTCAGATTGATGGCATTTCCCATGTCAAGTAACAACGATACACACATACTGTAAGTTGTAAAATTTGAATGAATGAAACCAGCACTGTGTTGATCCTAGATGTTTTTCAAGTTCAACTACCTTGAGGCCATTCAAGATTCTTTCACTTCATCAACCAGGCCATGCTAGTTGCTGGGCAGTACATTTTTTTTTTTCTGATGAGAAACAATTTCATTGGTATCATGAATAAGAGGGGAAACTCCAGTCCAAGGAGTTACAAGTTGTTGGACAGTACGTTGATTTGTATTTAGAAGTCTTATAAGGCTAAACAACCAACGGAATTAGTGAATCCATCTTTACTCACGTTGGTAAAGATAACTAAAGAAATGACATGACATTTCCATGGATTCGCTTTGGTAGACAAATATTGTTTCAACAAGTTCAGATCAAATGTGAGTTAACTGCAACTTCTTGATTCTCATATAGGTCCTATTTGTGTTGAAGTGTATTCCAGTTAATTCACATTACCATTTTTTTGTGTTCTGTCCAGCCGAAGGATTTAATTGTTTAACTTATTTCCTACTCTCATTAAGGTTTGCAGAGGCTTCTTCTGAGGATGAGTCGACTGGAAGTTATGATGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAACCTTCTATCGGAGATCATGCTAGTGAAAATATCCTGTTTATGATTCTTGAGTAGCTTGTTTTAATTCATTCTCTTATCTCTGCAGCTTTCTATATTTGTTTATTCAATCTTAAAATCCGAGCTTGCTACTGTTTGTTCGCTCCCTTATTTGATTAATACAGACAGAAGATCTCTCTGTCGATGCTAAAGATGAAGATACAATGGGAAGACCTCCATTTCTTGAAGGAAATCAAGTATTGATCTCTAAGCCTAAAAAAGTTTCTCGGGCTAAGGGAAATGTTGAGAGTAATAATCGTGGTTTATTCGTCCAGTCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAGAAG

mRNA sequence

ATGGCGCGAGGGTCATCGTCTTCGAAGAGGGAAGCAACAAACGGAGAGCTCGACCCGGAGGCTGCAACTCGTAAGCGGCTCAAGAAGCTCGCCTTCTCCAACAACGTACTCTCCCAAACCCAGGCAAAGCCTCAGGCGTATCTGAGCCCTTCGGCGACGGTTCTCAAACACCATGGCAAAGATATTGTTAAGAAATCTCAGCGAAAGAACAGGTTCCTTTTCTCGTTTTCCGGCTTGCTCACTCCCGTCAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCTATTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACATGTGAAGATTATTTTGATAGTATGGTTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAAGCTCGTCTTGATATTCCTAAAGAATTGACTACAGGAAAATGTGGAGAATACGACTTCAACGGTGGTGCTGGCGTTACAAGTACGAGTAAGCATAGTGTTCAAAAGAAGGGAATCAATCATGCCGAAGAACATTCTCATAAAGGAGAACGTGGAGATGGCTTAGCGGACCTTGAAGACAACATGATAAATTCAATAAACACTACACCAGTTAGACATTCTGAAAGATCTGCTGGAAAAGTGTTCAAGTTTGCAGAGGCTTCTTCTGAGGATGAGTCGACTGGAAGTTATGATGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAACCTTCTATCGGAGATCATGCTAAAGATCTCTCTGTCGATGCTAAAGATGAAGATACAATGGGAAGACCTCCATTTCTTGAAGGAAATCAAGTATTGATCTCTAAGCCTAAAAAAGTTTCTCGGGCTAAGGGAAATGTTGAGAGTAATAATCGTGGTTTATTCGTCCAGTCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAGAAG

Coding sequence (CDS)

ATGGCGCGAGGGTCATCGTCTTCGAAGAGGGAAGCAACAAACGGAGAGCTCGACCCGGAGGCTGCAACTCGTAAGCGGCTCAAGAAGCTCGCCTTCTCCAACAACGTACTCTCCCAAACCCAGGCAAAGCCTCAGGCGTATCTGAGCCCTTCGGCGACGGTTCTCAAACACCATGGCAAAGATATTGTTAAGAAATCTCAGCGAAAGAACAGGTTCCTTTTCTCGTTTTCCGGCTTGCTCACTCCCGTCAGTGGAGGCAAGATTGGCGAGCTCAAGGATTTGGGAACCAAGAATCCTATTCTCTATCTCGATTTTCCTCAGGGGCGTATGAAGTTGTTTGGAACTATCATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGTGGAAAGAATGTGACATGTGAAGATTATTTTGATAGTATGGTTGTCTTTTCTGATGCATGGTGGATTGGAACAAAAGATGAAAATCCAGAGGAAGCTCGTCTTGATATTCCTAAAGAATTGACTACAGGAAAATGTGGAGAATACGACTTCAACGGTGGTGCTGGCGTTACAAGTACGAGTAAGCATAGTGTTCAAAAGAAGGGAATCAATCATGCCGAAGAACATTCTCATAAAGGAGAACGTGGAGATGGCTTAGCGGACCTTGAAGACAACATGATAAATTCAATAAACACTACACCAGTTAGACATTCTGAAAGATCTGCTGGAAAAGTGTTCAAGTTTGCAGAGGCTTCTTCTGAGGATGAGTCGACTGGAAGTTATGATGATTTGTCTGAAGGAGAAGAAAAGAATATTGTCATACATGAACCTTCTATCGGAGATCATGCTAAAGATCTCTCTGTCGATGCTAAAGATGAAGATACAATGGGAAGACCTCCATTTCTTGAAGGAAATCAAGTATTGATCTCTAAGCCTAAAAAAGTTTCTCGGGCTAAGGGAAATGTTGAGAGTAATAATCGTGGTTTATTCGTCCAGTCTACTCTACCTAGTTTGTTCAAGAAAGTGGAGGAGAAG

Protein sequence

MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGKDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYDFNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK

Homology

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BLAST of MS020117 vs. NCBI nr
Match: XP_022137362.1 (DNA-binding protein RHL1 [Momordica charantia])

HSP 1 Score: 674.5 bits (1739), Expect = 4.9e-190
Identity = 341/346 (98.55%), Postives = 342/346 (98.84%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG
Sbjct: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP 300
           KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA    +DLSVDAKDEDTMGRP
Sbjct: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHASEKTEDLSVDAKDEDTMGRP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
           PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
Sbjct: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 346

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BLAST of MS020117 vs. NCBI nr
Match: XP_022924051.1 (DNA-binding protein RHL1-like [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 1.6e-153
Identity = 278/346 (80.35%), Postives = 302/346 (87.28%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE++PE A RKRLKKLAF+NN+LS+TQAKPQAY SPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGIN AEE S KGE GD L DLEDNM NS+ TTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP 300
           KVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
            FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 346

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BLAST of MS020117 vs. NCBI nr
Match: XP_023519239.1 (DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551.2 bits (1419), Expect = 6.3e-153
Identity = 277/346 (80.06%), Postives = 302/346 (87.28%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   G +DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGAMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T G+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGQCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGIN AEE+S K E GD L DLEDNM NS+ TTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP 300
           KVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
            FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 RFLEGNRTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 346

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BLAST of MS020117 vs. NCBI nr
Match: KAG7019884.1 (DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549.3 bits (1414), Expect = 2.4e-152
Identity = 277/354 (78.25%), Postives = 303/354 (85.59%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFNNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PK++T G+CGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKQMTMGQCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGIN AEE+S K E GD L DLEDNM NS+ TTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD------------LSVDAK 300
           KVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +            +SVD++
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASENILFMIIEFTEVVSVDSE 300

Query: 301 DEDTMGRPPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
           D+D + RP FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 DKDAVERPRFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 354

[Close]

BLAST of MS020117 vs. NCBI nr
Match: XP_023001787.1 (DNA-binding protein RHL1-like [Cucurbita maxima])

HSP 1 Score: 546.2 bits (1406), Expect = 2.0e-151
Identity = 275/346 (79.48%), Postives = 301/346 (86.99%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGI+ AEE+S K E GD L DLEDNM NS+ TTPVRHSERS G
Sbjct: 181 FNGGAGVASTSKQSVQKKGIDRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSGG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP 300
           KVF FA+A S++ES G+  D SEGEEKNIVI+EPSIGDHA +    +SVD++D+D + RP
Sbjct: 241 KVFNFAQAFSKEESAGTLADFSEGEEKNIVIYEPSIGDHASEKTEVVSVDSEDKDAVERP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
            FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 346

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BLAST of MS020117 vs. ExPASy Swiss-Prot
Match: O81242 (DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.6e-79
Identity = 175/359 (48.75%), Postives = 225/359 (62.67%), Query Frame = 0


Query: 1   MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHG 60
           M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYP 120
            DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP+LYL+FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEY 180
           KNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL   +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGA-GVTSTSKHSVQKKGINHAEEHSHKGERGDGLAD----LED--------NMINS 240
           DF GGA G  S  K +  + G    E  S + +  D L++    L+D         +   
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 INTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD 300
           +  TPVR S+R++GK F FAE SSE  S  S  + S+ +EK ++  EP            
Sbjct: 241 VQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKPLL--EP------------ 300

Query: 301 AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
             +  T  R    +GN +  S    P+++   +  ++S +  L VQ+TL +LFKK EEK
Sbjct: 301 --ESSTRSREESQDGNGITASASKLPEELPAKREKLKSKDSKL-VQATLSNLFKKAEEK 342

[Close]

BLAST of MS020117 vs. ExPASy TrEMBL
Match: A0A6J1C822 (DNA-binding protein RHL1 OS=Momordica charantia OX=3673 GN=LOC111008835 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 341/346 (98.55%), Postives = 342/346 (98.84%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG
Sbjct: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMGRP 300
           KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA    +DLSVDAKDEDTMGRP
Sbjct: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHASEKTEDLSVDAKDEDTMGRP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
           PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK
Sbjct: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 346

[Close]

BLAST of MS020117 vs. ExPASy TrEMBL
Match: A0A6J1E8G5 (DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 8.0e-154
Identity = 278/346 (80.35%), Postives = 302/346 (87.28%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE++PE A RKRLKKLAF+NN+LS+TQAKPQAY SPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMEPEIAARKRLKKLAFTNNILSETQAKPQAYPSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGIN AEE S KGE GD L DLEDNM NS+ TTPVRHSERSAG
Sbjct: 181 FNGGAGVASTSKQSVQKKGINRAEEKSLKGEHGDDLVDLEDNMTNSMKTTPVRHSERSAG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP 300
           KVF FA+A S++ES G+Y D SEGEEKNIVIHEPSIGDHA +    +SVD++D+D + RP
Sbjct: 241 KVFNFAQAFSKEESAGTYADFSEGEEKNIVIHEPSIGDHASEKTEVVSVDSEDKDAVERP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
            FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 346

[Close]

BLAST of MS020117 vs. ExPASy TrEMBL
Match: A0A6J1KHM2 (DNA-binding protein RHL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495823 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 9.7e-152
Identity = 275/346 (79.48%), Postives = 301/346 (86.99%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSKR+   GE+DPE A RKRLKKLAF+NN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKRDEAKGEMDPEIAARKRLKKLAFTNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDLGTKNPILYLDFPQGR+KLFGTI+YPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLGTKNPILYLDFPQGRLKLFGTIVYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFSRGGKNV CED FD+M+VFSDAWWIGTKDENPEE RLD PKE+T GKCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVMCEDCFDNMIVFSDAWWIGTKDENPEEDRLDFPKEMTMGKCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGV STSK SVQKKGI+ AEE+S K E GD L DLEDNM NS+ TTPVRHSERS G
Sbjct: 181 FNGGAGVASTSKQSVQKKGIDRAEENSLKEEHGDDLVDLEDNMTNSMKTTPVRHSERSGG 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKD----LSVDAKDEDTMGRP 300
           KVF FA+A S++ES G+  D SEGEEKNIVI+EPSIGDHA +    +SVD++D+D + RP
Sbjct: 241 KVFNFAQAFSKEESAGTLADFSEGEEKNIVIYEPSIGDHASEKTEVVSVDSEDKDAVERP 300

Query: 301 PFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
            FLEGN+  ISK K  SRAKGN +S NRGL VQ TLPSLFKKVEEK
Sbjct: 301 RFLEGNKTPISKSKNGSRAKGNAQSGNRGLLVQPTLPSLFKKVEEK 346

[Close]

BLAST of MS020117 vs. ExPASy TrEMBL
Match: A0A5D3BIX4 (DNA-binding protein RHL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002710 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 7.0e-150
Identity = 277/343 (80.76%), Postives = 301/343 (87.76%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSK++   GE++PE   RKRLKKLAFSNN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDL TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFS+GGKNVTCED FD+M+VFSDAWWIGTKDENPEEA LD PKELT G+CGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGVTSTSK SVQKKGIN A E+S KGE GD L  LE ++ NS+ T PVRHSERSA 
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMG-RPPFL 300
           KVF FAEASSEDESTG+  DLSEGEEKNIVIHEPSIGDHAKD+SV++ DED +  +P FL
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHAKDISVESIDEDAVEIKPSFL 300

Query: 301 EGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
           EGNQ  ISK KK SRAKG+ +S+ RGL VQ TL SLFKKVEEK
Sbjct: 301 EGNQTSISKEKKNSRAKGSAQSDTRGL-VQPTLLSLFKKVEEK 342

[Close]

BLAST of MS020117 vs. ExPASy TrEMBL
Match: A0A1S4DWD5 (DNA-binding protein RHL1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147
Identity = 276/347 (79.54%), Postives = 301/347 (86.74%), Query Frame = 0


Query: 1   MARGSSSSKREATNGELDPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHGK 60
           MARGSSSSK++   GE++PE   RKRLKKLAFSNN+LS+TQAKPQAYLSPSATVLKHHGK
Sbjct: 1   MARGSSSSKKDEAKGEINPEIGERKRLKKLAFSNNILSETQAKPQAYLSPSATVLKHHGK 60

Query: 61  DIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYPK 120
           DIVKKSQRKNRFLFSFSGLL PVSGGKIGELKDL TKNP+LYLDFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSQRKNRFLFSFSGLLAPVSGGKIGELKDLATKNPVLYLDFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEYD 180
           NRYLTLQFS+GGKNVTCED FD+M+VFSDAWWIGTKDENPEEA LD PKELT G+CGEYD
Sbjct: 121 NRYLTLQFSKGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKELTLGQCGEYD 180

Query: 181 FNGGAGVTSTSKHSVQKKGINHAEEHSHKGERGDGLADLEDNMINSINTTPVRHSERSAG 240
           FNGGAGVTSTSK SVQKKGIN A E+S KGE GD L  LE ++ NS+ T PVRHSERSA 
Sbjct: 181 FNGGAGVTSTSKQSVQKKGINPATENSFKGEHGDDLVGLEASVTNSVKTMPVRHSERSAR 240

Query: 241 KVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHA----KDLSVDAKDEDTMG-R 300
           KVF FAEASSEDESTG+  DLSEGEEKNIVIHEPSIGDHA    +D+SV++ DED +  +
Sbjct: 241 KVFNFAEASSEDESTGTDTDLSEGEEKNIVIHEPSIGDHASEKTEDISVESIDEDAVEIK 300

Query: 301 PPFLEGNQVLISKPKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
           P FLEGNQ  ISK KK SRAKG+ +S+ RGL VQ TL SLFKKVEEK
Sbjct: 301 PSFLEGNQTSISKEKKNSRAKGSAQSDTRGL-VQPTLLSLFKKVEEK 346

[Close]

BLAST of MS020117 vs. TAIR 10
Match: AT1G48380.1 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-80
Identity = 175/359 (48.75%), Postives = 225/359 (62.67%), Query Frame = 0


Query: 1   MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHG 60
           M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYP 120
            DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP+LYL+FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELTTGKCGEY 180
           KNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL   +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGA-GVTSTSKHSVQKKGINHAEEHSHKGERGDGLAD----LED--------NMINS 240
           DF GGA G  S  K +  + G    E  S + +  D L++    L+D         +   
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 INTTPVRHSERSAGKVFKFAEASSEDESTGSYDDLSEGEEKNIVIHEPSIGDHAKDLSVD 300
           +  TPVR S+R++GK F FAE SSE  S  S  + S+ +EK ++  EP            
Sbjct: 241 VQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKPLL--EP------------ 300

Query: 301 AKDEDTMGRPPFLEGNQVLISK---PKKVSRAKGNVESNNRGLFVQSTLPSLFKKVEEK 343
             +  T  R    +GN +  S    P+++   +  ++S +  L VQ+TL +LFKK EEK
Sbjct: 301 --ESSTRSREESQDGNGITASASKLPEELPAKREKLKSKDSKL-VQATLSNLFKKAEEK 342

[Close]

BLAST of MS020117 vs. TAIR 10
Match: AT1G48380.2 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-75
Identity = 175/390 (44.87%), Postives = 225/390 (57.69%), Query Frame = 0


Query: 1   MARGSSSSKREATNGEL-DPEAATRKRLKKLAFSNNVLSQTQAKPQAYLSPSATVLKHHG 60
           M R SSS K  +  G+  D E+  RKRLK LA  N +LS + AK  + L PS  VLKHHG
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSQRKNRFLFSFSGLLTPVSGGKIGELKDLGTKNPILYLDFPQGRMKLFGTIMYP 120
            DI++KSQRKNRFLFSF GLL P+S   IG+L  L TKNP+LYL+FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDSMVVFSDAWWIGTKDENPEEARLDIPKELT------- 180
           KNRYLTLQFSRGGKNV C+DYFD+M+VFS++WWIGTK+ENPEEARLD PKEL        
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQVDTFHL 180

Query: 181 ------------------------TGKCGEYDFNGGA-GVTSTSKHSVQKKGINHAEEHS 240
                                     +  E+DF GGA G  S  K +  + G    E  S
Sbjct: 181 FLHFLFKTMVATEMFNMIRRILWFQAENTEFDFQGGAGGAASVKKLASPEIGSQPTETDS 240

Query: 241 HKGERGDGLAD----LED--------NMINSINTTPVRHSERSAGKVFKFAEASSEDEST 300
            + +  D L++    L+D         +   +  TPVR S+R++GK F FAE SSE  S 
Sbjct: 241 PEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQVTPVRQSQRNSGKKFNFAETSSEASSG 300

Query: 301 GSYDDLSEGEEKNIVIHEPSIGDHAKDLSVDAKDEDTMGRPPFLEGNQVLISK---PKKV 343
            S  + S+ +EK ++  EP              +  T  R    +GN +  S    P+++
Sbjct: 301 ESEGNTSDEDEKPLL--EP--------------ESSTRSREESQDGNGITASASKLPEEL 360

The following BLAST results are available for this feature:

BLAST of MS020117 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137362.1	4.9e-190	98.55	DNA-binding protein RHL1 [Momordica charantia]	[more]
XP_022924051.1	1.6e-153	80.35	DNA-binding protein RHL1-like [Cucurbita moschata]	[more]
XP_023519239.1	6.3e-153	80.06	DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7019884.1	2.4e-152	78.25	DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023001787.1	2.0e-151	79.48	DNA-binding protein RHL1-like [Cucurbita maxima]	[more]

BLAST of MS020117 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81242	3.6e-79	48.75	DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1	[more]

BLAST of MS020117 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C822	2.4e-190	98.55	DNA-binding protein RHL1 OS=Momordica charantia OX=3673 GN=LOC111008835 PE=4 SV=...	[more]
A0A6J1E8G5	8.0e-154	80.35	DNA-binding protein RHL1-like OS=Cucurbita moschata OX=3662 GN=LOC111431599 PE=4...	[more]
A0A6J1KHM2	9.7e-152	79.48	DNA-binding protein RHL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495823 PE=4 S...	[more]
A0A5D3BIX4	7.0e-150	80.76	DNA-binding protein RHL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S4DWD5	1.1e-147	79.54	DNA-binding protein RHL1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504698 PE=4...	[more]

BLAST of MS020117 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48380.1	2.6e-80	48.75	root hair initiation protein root hairless 1 (RHL1)	[more]
AT1G48380.2	1.9e-75	44.87	root hair initiation protein root hairless 1 (RHL1)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..217
IPR038859	DNA-binding protein RHL1	PANTHER	PTHR35698	DNA-BINDING PROTEIN RHL1	coord: 1..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS020117.1	MS020117.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
molecular_function	GO:0003677	DNA binding