MS019988 (gene) Bitter gourd (TR) v1

Overview


Name	MS019988
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	50S ribosomal protein L19, chloroplastic-like
Location	scaffold22: 1035642 .. 1038278 (+)
RNA-Seq Expression	MS019988
Synteny	MS019988

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTAGCGCGAAAATGCAAAGTTTTCGCAGAATTAATCAGTTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATCGATTAGAGGTTACCCACTTAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAATGTCGATGGAAAACGGTTTTACTATTGCTCGGCCTTTTGGAAATCCATATGGGTCTTTGAATGGTTCCTTCTTGAGGTCTTTCTCAAAGTTGAGCAATCAATATCCGGAAGCCTTCGTATGTATTTTTTCTTATTTAAGTATTCATGCGTTATGATCGTTTATTAGTATCATTTGTTTTTTTGTGTTGTTTTTGAAGTTTCTATTCGGTCAAATATCGGTCAAGCTCCAATTACAAACTTTTACGGAATCATCTATACTCCATGTTTAAGTTCATAAGCGATAGGACACAAGAATATGACATGGTCTTGGCCAACATCTGATTGGCTTGTGTACGTTTTTGGGTCCATGTCTCCATCTCTGGCCAGACGTGATTTCTACTAAATGTTTTATTGGTAAAAAGTTATGTAAAGTATGAACAGTTTAGCTCGAAATTGATCCTGACGTTCAGTAATGCCTTAATCAACAGAATTGTCTTCATTATTGTCTTAGTGATTACGTATCGTATTTTCCAAAAGATGAAGATAGTCCGAAAATAATTAGCTTGCAATTGCATGAAGCTGGTGTACTTTTTCAAAAAAAAAAAAAAATTGTAATTAGCTCTTTGCTTTTATATTACTTGCCAATTGGAGTGCCTTTCTATAACTTCCTTGGCATCTATGGAGATGGCTTATCTTCCTCTTATCAGTGATGCTAGTTTTTTATGTACTAAAAAGAACTGAAACAACAGAGAAACTACCATCTATCCTATGAAATATTTTCAGAAAATTGTGTATATGAACTGTGTTAAATTATGATACTTATTGGAAGCAATATCTATTTCTTTAAAGACTTGGGAATATATCGTCATAACATTTTATTCAACTTCATGGCAGATAAATATGGGTTCTCAAGTGGAATTTGTGTCTTCGAGAAAGCATGTATCTTCAACTTGTTCAGTATTCCAGAGGCCTAGGCCACTTTTATTTCAGTTGGCAGAAGTTGCCCCTCCTTTTTCTAGCAGGGGCATTGCGACTAGTTCCGTGGAATCAGTTTCACAAGAATCTCCTGAAATTACCCCTGATATAACTCCTCGCATCAAATTTAAGAGGCTGGATAAAACCTCAAAACACATAATGCAGGCACTCACATTTCTGAGTATTTTTGGAAAATAAGTCATTGCATTTCATCTTCCCATTTATTTGGTTTTCATATATTGTTTTTCTTCCACAGATTTTAGATAAGGAAGCTATTGAGGAGGTAAAAGCACAGAGAGAAATTCCAGATATTAAGCCAGGCTATATTGTGCAGCTCAAAGTGGTAGAGTTTATTTTAGTCAAATAGTATATCATGTTGTATCATTGGTTATAGATAACGTACTTATTCTAAATGCAGTTGTAGATGAGGTTATTGAAGTGTTTTCTGGCTTTTTCTGTCTTCTTTGAACAGGAAGTACCTGAGAACAAGCGCCGTGTCTCGACATTGAAAGGCATTGTAATAGCCAGACGCAATGCTGGTCTAAACACAACTTTTAGACTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCGCTCTTTCCTCTGTAAGTAATGCTAATTTTTTGTTGATATTTAATTTTTTCCAAAAGTTAGCTTCCTAACTTCATTACCTTTGTCCCTGCTCACCTCAATGATGAAGAAGCATATTCTTTGTCTTTGTTCTATTCATTCCCTCCCTTGGATGGCTGACATTAACGAATGTAATGAGGTTATGCTAAGCTCTAGATCTCAATTTTGCGTTCGCATGTCATAGAGTCTTCTCTTTCGTCTTGTAGATTATGGTTTTCATTTTTCCTCTTTTTTTGGTGGAGAATTTGATACAAATGATTAACTTTAAGGCGTGTACCTATATGGATTTTGAGTCTTGAACCATGCTTGAAATTTTTTGAGATTCATGTAACATATTATAAGAAAGAGCATTAGGAAAGAAATGTAATTATGATACAAAGGAATTACACTTATGGACCCTATTCTATTTAAACAGAGGAACAATCATCCTCTTGAAGAAATGCAATTTTTTTTTTATCATAGTTCAGGTGGAGATTCATGTAGCATCTCATTAGAAAGAGCACTAGGAAAGAAATGCAATTATGGTACAAATGATCTTACTCCATGTGGACAATATTCTATTTCAACAACAGAGGAACAAACATCTTGTTGAAGTTGCTGTATAATATATACACACATAGATATGTGAGGTCTTCCTCTTTATAGATGTTCATTGTCACTAAAACTAAAATCAAACTCTTAGTTACGTGAGAGCTCGCTAGTCTAACTTTTGATTAGTTTGATTGTTTTTGAGAATTCACATTTGGTTTTGCCTGTCCACTGTCTATTTCTGGTGGCTCTTTGCATATGACTAATCAAGTGATTGATGAATGACAGATACTCACCAAACATAAAAGAGATTAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCCAAGCTTTATTATCTTAGGGACAAAATGAACGCACTTAAGAAGCAA

mRNA sequence

AAATCTAGCGCGAAAATGCAAAGTTTTCGCAGAATTAATCAGTTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATCGATTAGAGGTTACCCACTTAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAATGTCGATGGAAAACGGTTTTACTATTGCTCGGCCTTTTGGAAATCCATATGGGTCTTTGAATGGTTCCTTCTTGAGGTCTTTCTCAAAGTTGAGCAATCAATATCCGGAAGCCTTCATAAATATGGGTTCTCAAGTGGAATTTGTGTCTTCGAGAAAGCATGTATCTTCAACTTGTTCAGTATTCCAGAGGCCTAGGCCACTTTTATTTCAGTTGGCAGAAGTTGCCCCTCCTTTTTCTAGCAGGGGCATTGCGACTAGTTCCGTGGAATCAGTTTCACAAGAATCTCCTGAAATTACCCCTGATATAACTCCTCGCATCAAATTTAAGAGGCTGGATAAAACCTCAAAACACATAATGCAGGCACTCACATTTCTGAATAAGGAAGCTATTGAGGAGGTAAAAGCACAGAGAGAAATTCCAGATATTAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGCCGTGTCTCGACATTGAAAGGCATTGTAATAGCCAGACGCAATGCTGGTCTAAACACAACTTTTAGACTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCGCTCTTTCCTCTATACTCACCAAACATAAAAGAGATTAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCCAAGCTTTATTATCTTAGGGACAAAATGAACGCACTTAAGAAGCAA

Coding sequence (CDS)

AAATCTAGCGCGAAAATGCAAAGTTTTCGCAGAATTAATCAGTTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATCGATTAGAGGTTACCCACTTAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAATGTCGATGGAAAACGGTTTTACTATTGCTCGGCCTTTTGGAAATCCATATGGGTCTTTGAATGGTTCCTTCTTGAGGTCTTTCTCAAAGTTGAGCAATCAATATCCGGAAGCCTTCATAAATATGGGTTCTCAAGTGGAATTTGTGTCTTCGAGAAAGCATGTATCTTCAACTTGTTCAGTATTCCAGAGGCCTAGGCCACTTTTATTTCAGTTGGCAGAAGTTGCCCCTCCTTTTTCTAGCAGGGGCATTGCGACTAGTTCCGTGGAATCAGTTTCACAAGAATCTCCTGAAATTACCCCTGATATAACTCCTCGCATCAAATTTAAGAGGCTGGATAAAACCTCAAAACACATAATGCAGGCACTCACATTTCTGAATAAGGAAGCTATTGAGGAGGTAAAAGCACAGAGAGAAATTCCAGATATTAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGCCGTGTCTCGACATTGAAAGGCATTGTAATAGCCAGACGCAATGCTGGTCTAAACACAACTTTTAGACTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCGCTCTTTCCTCTATACTCACCAAACATAAAAGAGATTAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCCAAGCTTTATTATCTTAGGGACAAAATGAACGCACTTAAGAAGCAA

Protein sequence

KSSAKMQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLNGSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSSRGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ

Homology

[Close]

BLAST of MS019988 vs. NCBI nr
Match: XP_022137703.1 (50S ribosomal protein L19, chloroplastic-like [Momordica charantia])

HSP 1 Score: 510.8 bits (1314), Expect = 7.6e-141
Identity = 266/271 (98.15%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN
Sbjct: 1   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS
Sbjct: 61  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 120

Query: 126 RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIP 185
           RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQ    L+KEAIEEVKAQREIP
Sbjct: 121 RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQ---ILDKEAIEEVKAQREIP 180

Query: 186 DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP 245
           DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP
Sbjct: 181 DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP 240

Query: 246 NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 277
           NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 268

[Close]

BLAST of MS019988 vs. NCBI nr
Match: KAG6573088.1 (50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.1 bits (1089), Expect = 9.3e-115
Identity = 227/276 (82.25%), Postives = 240/276 (86.96%), Query Frame = 0


Query: 1   KSSAKMQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNP 60
           KS+ +MQ+FRRINQLVRRQSPDAHFKSIRGYPLNGDA C CSA MSME  FT  R FGNP
Sbjct: 599 KSTVRMQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNP 658

Query: 61  YGSLNGSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVA 120
           Y SLNGS  RSFSKL NQYPEAF +MGSQ+EF+ S K VSSTCS FQ PR  LFQLAE+A
Sbjct: 659 YESLNGSLFRSFSKLGNQYPEAFKDMGSQMEFLPSVKRVSSTCSAFQSPRKHLFQLAEIA 718

Query: 121 PPFSSRGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVK 180
            PFSSRGIA TSS+ES  Q S  I  DITPRIKFKRLDKTSKHIMQ    L+KEA+EEVK
Sbjct: 719 APFSSRGIATTSSIESAPQGSSGIDTDITPRIKFKRLDKTSKHIMQ---ILDKEAVEEVK 778

Query: 181 AQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESL 240
           A+REIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESL
Sbjct: 779 AKREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESL 838

Query: 241 FPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           FPLYSPNIKEI VLDKKKVRRAKLYYLRDKM +LKK
Sbjct: 839 FPLYSPNIKEITVLDKKKVRRAKLYYLRDKMKSLKK 871

[Close]

BLAST of MS019988 vs. NCBI nr
Match: KAE8652777.1 (hypothetical protein Csa_022701 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 5.1e-113
Identity = 225/277 (81.23%), Postives = 239/277 (86.28%), Query Frame = 0


Query: 1   KSSAKMQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNP 60
           KSSAKMQ FRRINQLVRRQ PDA+FK IRGYPLNGDAGCSCSAPMSMEN FTI   FG  
Sbjct: 227 KSSAKMQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKS 286

Query: 61  YGSLNGSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVA 120
           YGSL GSFLRSFS+  NQYPEAF NM SQ+EFV  RKH SST S FQ  RP  FQLAE A
Sbjct: 287 YGSLCGSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETA 346

Query: 121 PPFSSRGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVK 180
            PFSSRGIA TSS+ES  Q SP +   I PRIKFKRLDKTS+HIMQ    L+KEA+EEVK
Sbjct: 347 APFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQ---ILDKEAVEEVK 406

Query: 181 AQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESL 240
           A+REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESL
Sbjct: 407 ARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESL 466

Query: 241 FPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 277
           FPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKKQ
Sbjct: 467 FPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 500

[Close]

BLAST of MS019988 vs. NCBI nr
Match: XP_038896029.1 (uncharacterized protein LOC120084206 [Benincasa hispida])

HSP 1 Score: 417.9 bits (1073), Expect = 6.7e-113
Identity = 224/272 (82.35%), Postives = 235/272 (86.40%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQ FRRINQLVRRQSPDAHFK IRGYPLNG+AGCSCS PM MEN   I+  FGN Y S +
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGNAGCSCSTPMLMENSSAISCLFGNSYVSFS 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GS LRSFS+L NQ PEAF NM SQ+EFV SRKHVSS CS F   RP LFQLAE+  PFSS
Sbjct: 61  GSLLRSFSRLGNQDPEAFKNMSSQMEFVPSRKHVSSVCSAFPSSRPHLFQLAEIVAPFSS 120

Query: 126 RGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREI 185
           RGIA TSS+ES  Q SP +  DITPRIKFKRLDKTSKHIMQ    L+KEA+EEVKAQREI
Sbjct: 121 RGIATTSSMESALQGSPAVDSDITPRIKFKRLDKTSKHIMQ---ILDKEAVEEVKAQREI 180

Query: 186 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 245
           PDI+PGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS
Sbjct: 181 PDIRPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 240

Query: 246 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 277
           PNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 269

[Close]

BLAST of MS019988 vs. NCBI nr
Match: XP_022955270.1 (54S ribosomal protein subunit img1, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 1.9e-112
Identity = 223/271 (82.29%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQ+FRRINQLVRRQSPDAHFKSIRGYPLNGDA C CSA MSME  FT  R FGNPY SLN
Sbjct: 1   MQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNPYESLN 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GS  RSFSKL NQYPEAF +MGSQ+EF+ S K VSSTC  FQ P+  LFQLAE+A PFSS
Sbjct: 61  GSLFRSFSKLGNQYPEAFKDMGSQMEFLPSVKRVSSTCPAFQSPKKHLFQLAEIAAPFSS 120

Query: 126 RGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREI 185
           RGIA TSS+ES  Q S  I  DITPRIKFKRLDKTSKHIMQ    L+KEA+EEVKA+REI
Sbjct: 121 RGIATTSSMESAPQGSSGIDTDITPRIKFKRLDKTSKHIMQ---ILDKEAVEEVKAKREI 180

Query: 186 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 245
           PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESLFPLYS
Sbjct: 181 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESLFPLYS 240

Query: 246 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           PNIKEI VLDKKKVRRAKLYYLRDKM +LKK
Sbjct: 241 PNIKEITVLDKKKVRRAKLYYLRDKMKSLKK 268

[Close]

BLAST of MS019988 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-31
Identity = 71/143 (49.65%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 131 SSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIPDIKPG 190
           +  E   +E  E  P   PRIK          +   +  LN++AIE  +  R +P+I+ G
Sbjct: 89  ADTEGNVEEVVEAKPTRKPRIK----------LGDVMGILNQKAIEVAEKVRPVPEIRTG 148

Query: 191 YIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEI 250
            IV++K+EVPENKRR+S  KGIV++R+NAG++TT R+RR++AG+G+E +FP+YSPNIKEI
Sbjct: 149 DIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEI 208

Query: 251 KVLDKKKVRRAKLYYLRDKMNAL 274
           KV+  +KVRRA+LYYLRDK+  L
Sbjct: 209 KVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of MS019988 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-31
Identity = 65/116 (56.03%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 158 KTSKHIMQALTFLNKEAIEEVKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARR 217
           KT   +   +  LNK+AIE  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+
Sbjct: 110 KTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQ 169

Query: 218 NAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNAL 274
           NAG++TT R+RR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 170 NAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of MS019988 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-31
Identity = 81/187 (43.32%), Postives = 116/187 (62.03%), Query Frame = 0


Query: 90  VEFVSSRKHVSSTCSVFQRPRPLLFQL---AEVAPPFSSRGIATSSVESVSQESPEITPD 149
           V   SS    S+  S+F  P    F +   AE +    +  +A  + E +  ES     +
Sbjct: 50  VSRASSNLFSSNFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEE 109

Query: 150 ITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIPDIKPGYIVQLKVEVPENKRRV 209
             PR +  +L          +  LNK+A+   +  R +P I+ G IVQ+++EVPENKRR+
Sbjct: 110 RPPRQQRVKLG-------DIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRL 169

Query: 210 STLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYL 269
           S  KGIVI+R+NAG++TT R+RR++AGVG+E +FPLYSPNIKEIKV+  +KVR+A+LYYL
Sbjct: 170 SVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYL 229

Query: 270 RDKMNAL 274
           RDK+  L
Sbjct: 230 RDKLPRL 229

[Close]

BLAST of MS019988 vs. ExPASy Swiss-Prot
Match: Q2VZV5 (50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplS PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 50/101 (49.50%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 170 LNKEAIEEVKAQREIPDIKPGYIVQLKVEVPE-NKRRVSTLKGIVIARRNAGLNTTFRLR 229
           L KE IE++ A R +P   PG  +++ V+V E N+ RV   +G+ IAR+N GLN++F +R
Sbjct: 8   LEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNSSFVVR 67

Query: 230 RLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDK 270
           ++  G G+E +FPLYSPNI  I+V+ +  VRRAKLYYLRD+
Sbjct: 68  KISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108

[Close]

BLAST of MS019988 vs. ExPASy Swiss-Prot
Match: Q2RV56 (50S ribosomal protein L19 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rplS PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18
Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 164 MQALTFLNKEAIEEVKAQREIPDIKPGYIVQLKVEVPE-NKRRVSTLKGIVIARRNAGLN 223
           M  +    KE IE++  QR +P   PG  +++ V+V E N++RV   +G+ IARRNA LN
Sbjct: 1   MNIIEQFEKEQIEKLLEQRGVPQFSPGDTLRVHVKVIEGNRQRVQVYEGVCIARRNAALN 60

Query: 224 TTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDK 270
           ++F +R++  G G+E +FPLY+P I  I+V+ + KVRRAKLYYLR +
Sbjct: 61  SSFTVRKISFGEGVERIFPLYAPTIDRIEVVRRGKVRRAKLYYLRGR 107

[Close]

BLAST of MS019988 vs. ExPASy TrEMBL
Match: A0A6J1CB38 (50S ribosomal protein L19, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009074 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.7e-141
Identity = 266/271 (98.15%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN
Sbjct: 1   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS
Sbjct: 61  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 120

Query: 126 RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIP 185
           RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQ    L+KEAIEEVKAQREIP
Sbjct: 121 RGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQ---ILDKEAIEEVKAQREIP 180

Query: 186 DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP 245
           DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP
Sbjct: 181 DIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSP 240

Query: 246 NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 277
           NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 NIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 268

[Close]

BLAST of MS019988 vs. ExPASy TrEMBL
Match: A0A0A0LV41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.5e-113
Identity = 225/277 (81.23%), Postives = 239/277 (86.28%), Query Frame = 0


Query: 1   KSSAKMQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNP 60
           KSSAKMQ FRRINQLVRRQ PDA+FK IRGYPLNGDAGCSCSAPMSMEN FTI   FG  
Sbjct: 133 KSSAKMQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKS 192

Query: 61  YGSLNGSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVA 120
           YGSL GSFLRSFS+  NQYPEAF NM SQ+EFV  RKH SST S FQ  RP  FQLAE A
Sbjct: 193 YGSLCGSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETA 252

Query: 121 PPFSSRGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVK 180
            PFSSRGIA TSS+ES  Q SP +   I PRIKFKRLDKTS+HIMQ    L+KEA+EEVK
Sbjct: 253 APFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQ---ILDKEAVEEVK 312

Query: 181 AQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESL 240
           A+REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESL
Sbjct: 313 ARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESL 372

Query: 241 FPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKKQ 277
           FPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKKQ
Sbjct: 373 FPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 406

[Close]

BLAST of MS019988 vs. ExPASy TrEMBL
Match: A0A6J1GUP7 (54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 9.4e-113
Identity = 223/271 (82.29%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQ+FRRINQLVRRQSPDAHFKSIRGYPLNGDA C CSA MSME  FT  R FGNPY SLN
Sbjct: 1   MQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNPYESLN 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GS  RSFSKL NQYPEAF +MGSQ+EF+ S K VSSTC  FQ P+  LFQLAE+A PFSS
Sbjct: 61  GSLFRSFSKLGNQYPEAFKDMGSQMEFLPSVKRVSSTCPAFQSPKKHLFQLAEIAAPFSS 120

Query: 126 RGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREI 185
           RGIA TSS+ES  Q S  I  DITPRIKFKRLDKTSKHIMQ    L+KEA+EEVKA+REI
Sbjct: 121 RGIATTSSMESAPQGSSGIDTDITPRIKFKRLDKTSKHIMQ---ILDKEAVEEVKAKREI 180

Query: 186 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 245
           PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESLFPLYS
Sbjct: 181 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESLFPLYS 240

Query: 246 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           PNIKEI VLDKKKVRRAKLYYLRDKM +LKK
Sbjct: 241 PNIKEITVLDKKKVRRAKLYYLRDKMKSLKK 268

[Close]

BLAST of MS019988 vs. ExPASy TrEMBL
Match: A0A6J1GVN3 (54S ribosomal protein subunit img1, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.3e-111
Identity = 223/272 (81.99%), Postives = 235/272 (86.40%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQ+FRRINQLVRRQSPDAHFKSIRGYPLNGDA C CSA MSME  FT  R FGNPY SLN
Sbjct: 1   MQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNPYESLN 60

Query: 66  GSFLRSFSKLSNQYPEAF-INMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFS 125
           GS  RSFSKL NQYPEAF  +MGSQ+EF+ S K VSSTC  FQ P+  LFQLAE+A PFS
Sbjct: 61  GSLFRSFSKLGNQYPEAFQKDMGSQMEFLPSVKRVSSTCPAFQSPKKHLFQLAEIAAPFS 120

Query: 126 SRGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQRE 185
           SRGIA TSS+ES  Q S  I  DITPRIKFKRLDKTSKHIMQ    L+KEA+EEVKA+RE
Sbjct: 121 SRGIATTSSMESAPQGSSGIDTDITPRIKFKRLDKTSKHIMQ---ILDKEAVEEVKAKRE 180

Query: 186 IPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLY 245
           IPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESLFPLY
Sbjct: 181 IPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESLFPLY 240

Query: 246 SPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           SPNIKEI VLDKKKVRRAKLYYLRDKM +LKK
Sbjct: 241 SPNIKEITVLDKKKVRRAKLYYLRDKMKSLKK 269

[Close]

BLAST of MS019988 vs. ExPASy TrEMBL
Match: A0A6J1K1Y5 (50S ribosomal protein L19, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490302 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.3e-110
Identity = 221/271 (81.55%), Postives = 231/271 (85.24%), Query Frame = 0


Query: 6   MQSFRRINQLVRRQSPDAHFKSIRGYPLNGDAGCSCSAPMSMENGFTIARPFGNPYGSLN 65
           MQ+F RINQLVRRQS  AHFK IRGYPLNGDA   CSA MSMEN  T  R F NPYGSLN
Sbjct: 1   MQNFPRINQLVRRQSSYAHFKPIRGYPLNGDASSCCSASMSMENSLTSLRLFANPYGSLN 60

Query: 66  GSFLRSFSKLSNQYPEAFINMGSQVEFVSSRKHVSSTCSVFQRPRPLLFQLAEVAPPFSS 125
           GS  RSFSKL NQYPEAF +MGSQ+EF+ S K VSS C  FQ PR  LFQLAE+A PFSS
Sbjct: 61  GSLFRSFSKLGNQYPEAFKDMGSQMEFLPSGKRVSSACPAFQSPRKHLFQLAEIAAPFSS 120

Query: 126 RGIA-TSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREI 185
           RGIA TSS+ES  Q SP I  DITPRIKFKRLDKTSKHIMQ    L+KEAIEEVKA+REI
Sbjct: 121 RGIATTSSMESAPQGSPAIDSDITPRIKFKRLDKTSKHIMQ---ILDKEAIEEVKAKREI 180

Query: 186 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 245
           PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESLFPLYS
Sbjct: 181 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESLFPLYS 240

Query: 246 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           PNIKEI VLDKKKVRRAKLYYLRDKMNALK+
Sbjct: 241 PNIKEITVLDKKKVRRAKLYYLRDKMNALKR 268

[Close]

BLAST of MS019988 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 211.5 bits (537), Expect = 8.8e-55
Identity = 113/153 (73.86%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 123 FSSRGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQR 182
           FS+ G    SV+S  Q SPE    +  RIKFKRLDKT+KHIMQ    ++KEA+EEV+  R
Sbjct: 82  FSTTG---DSVQSTPQGSPESDCVVPQRIKFKRLDKTAKHIMQ---IVDKEAVEEVRNLR 141

Query: 183 EIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPL 242
           EIP+IKPGYIVQLKVEVPENKRRVS +KG+VIARRNAGLN+TFR+RRLVAGVG+ES+FPL
Sbjct: 142 EIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPL 201

Query: 243 YSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           YSPN++EIKV+DKKKVRRAKLYYLRDK+NALKK
Sbjct: 202 YSPNLREIKVVDKKKVRRAKLYYLRDKVNALKK 228

[Close]

BLAST of MS019988 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-54
Identity = 112/153 (73.20%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 123 FSSRGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQR 182
           ++SR  +T+   SV Q SPE    +  RIKFKRLDKT+KHIMQ    ++KEA+EEV++ R
Sbjct: 76  YASRCFSTTGDSSV-QGSPESDCVVPQRIKFKRLDKTAKHIMQ---IVDKEAVEEVRSLR 135

Query: 183 EIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPL 242
           EIP+IKPGYIVQLKVEVPENKRRVS +KG+VIARRNAGLN+TFR+RRLVAGVG+ES+FPL
Sbjct: 136 EIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPL 195

Query: 243 YSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           YSPN++EIKV+DKKKVRRAKLYYLRDK+NALKK
Sbjct: 196 YSPNLREIKVVDKKKVRRAKLYYLRDKVNALKK 224

[Close]

BLAST of MS019988 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 205.7 bits (522), Expect = 4.8e-53
Identity = 112/153 (73.20%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 123 FSSRGIATSSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQR 182
           FSSR  +T+  +SV Q SPE    +  RIKFKRLDKT+KHIMQ    ++KEA+EEV+  R
Sbjct: 74  FSSRCFSTTG-DSV-QGSPESDCVVPQRIKFKRLDKTAKHIMQ---IVDKEAVEEVRTLR 133

Query: 183 EIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPL 242
           EIP+IKPGYIVQLKVEVPENKRRVS +KG+VIARRNAGLN+TFR+RRLVAGVG+ES+FPL
Sbjct: 134 EIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPL 193

Query: 243 YSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 276
           YSPN++ IKV+DKKKVRRAKLYYLR+K+NALKK
Sbjct: 194 YSPNLRVIKVVDKKKVRRAKLYYLREKVNALKK 221

[Close]

BLAST of MS019988 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-32
Identity = 71/143 (49.65%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 131 SSVESVSQESPEITPDITPRIKFKRLDKTSKHIMQALTFLNKEAIEEVKAQREIPDIKPG 190
           +  E   +E  E  P   PRIK          +   +  LN++AIE  +  R +P+I+ G
Sbjct: 89  ADTEGNVEEVVEAKPTRKPRIK----------LGDVMGILNQKAIEVAEKVRPVPEIRTG 148

Query: 191 YIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEI 250
            IV++K+EVPENKRR+S  KGIV++R+NAG++TT R+RR++AG+G+E +FP+YSPNIKEI
Sbjct: 149 DIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEI 208

Query: 251 KVLDKKKVRRAKLYYLRDKMNAL 274
           KV+  +KVRRA+LYYLRDK+  L
Sbjct: 209 KVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of MS019988 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-32
Identity = 65/116 (56.03%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 158 KTSKHIMQALTFLNKEAIEEVKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARR 217
           KT   +   +  LNK+AIE  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+
Sbjct: 110 KTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQ 169

Query: 218 NAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNAL 274
           NAG++TT R+RR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 170 NAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

The following BLAST results are available for this feature:

BLAST of MS019988 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137703.1	7.6e-141	98.15	50S ribosomal protein L19, chloroplastic-like [Momordica charantia]	[more]
KAG6573088.1	9.3e-115	82.25	50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
KAE8652777.1	5.1e-113	81.23	hypothetical protein Csa_022701 [Cucumis sativus]	[more]
XP_038896029.1	6.7e-113	82.35	uncharacterized protein LOC120084206 [Benincasa hispida]	[more]
XP_022955270.1	1.9e-112	82.29	54S ribosomal protein subunit img1, mitochondrial-like isoform X2 [Cucurbita mos...	[more]

BLAST of MS019988 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	5.1e-31	49.65	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8RXX5	5.1e-31	56.03	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	6.6e-31	43.32	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q2VZV5	2.6e-19	49.50	50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
Q2RV56	1.7e-18	45.79	50S ribosomal protein L19 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]

BLAST of MS019988 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB38	3.7e-141	98.15	50S ribosomal protein L19, chloroplastic-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LV41	2.5e-113	81.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1	[more]
A0A6J1GUP7	9.4e-113	82.29	54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1GVN3	2.3e-111	81.99	54S ribosomal protein subunit img1, mitochondrial-like isoform X1 OS=Cucurbita m...	[more]
A0A6J1K1Y5	3.3e-110	81.55	50S ribosomal protein L19, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=...	[more]

BLAST of MS019988 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11750.1	8.8e-55	73.86	Ribosomal protein L19 family protein	[more]
AT4G11630.1	1.5e-54	73.20	Ribosomal protein L19 family protein	[more]
AT1G24240.1	4.8e-53	73.20	Ribosomal protein L19 family protein	[more]
AT4G17560.1	3.6e-32	49.65	Ribosomal protein L19 family protein	[more]
AT5G47190.1	3.6e-32	56.03	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 171..200 score: 20.69 coord: 230..253 score: 39.58
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 174..270 e-value: 4.4E-31 score: 107.1
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 175..270 e-value: 6.9E-29 score: 98.3
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 66..274
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 154..276 e-value: 8.6E-35 score: 121.3
None	No IPR available	PANTHER	PTHR15680:SF9	39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL	coord: 66..274
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 173..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS019988.1	MS019988.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome