MS019927 (gene) Bitter gourd (TR) v1

Overview
NameMS019927
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDeoxycytidylate deaminase-like
Locationscaffold22: 581459 .. 583968 (+)
RNA-Seq ExpressionMS019927
SyntenyMS019927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCCCGCGAGCTTTCTCTCGTCTCCACAGCCACCGTATTTGGTGTTCTGGCTTCGGCTGTTGCTTTTCGCTTCTTCTTCAATCCTAAAAAGCACCGTCCTCGATTTGATTTGCCGGGAAATGATGCTCTTTCGAACAAAGCGCCCTCTCAGTGCCCTTTCGATCCTTCCAAACGCCAAGGGTAGGAAAAATTTATGATGTGTGTGCTTTCATGTTTCTCTTAGATCTCTGCTTTGCCCCGACCAGCGTACCCCCAACATTGTTAGGGCTTATATTCTTCAGGAACCTATATGTTTCTAGTCATATAACTTAATTTTTTAATTTTCATACGCCTTTAATTTTGATGAAATTACCCAGTTTGGAATTCTGTGGATTACTTGCAGTTATTTGTCATGGGATGACTATTTCATGGCCATTGCATTCCTGTCTGCAGAAAGATCGAAGGATCCCAATCGGCAGGTCGTTATCGTGTTTCTCTGGAATATGCATATTTGCTTTTATTATTGATTTCTAATCATGAAAGTGATGATGCCATCAATTATTTACATATCTGAATTTCTCTGTTTAAGTTCATATGCTATTAGTTGTTCTATATGGTTGGATGTTCTGAGGGTTTGTTGTATCAATCAAAACTTTCGTTCACTGTTTAATTATTCATACAGTTTTCTGTTTGGATTTGTGTTCTATGGTGTAGGTTGGTGCGTGCCTGGTTAGTCAAAATGGTGTAATTCTTGGTAAGTTTGCTTCAAGGTCCATACACATGGCGTTGTTGATTACTTGGCTGTGTTGAGTGAATCGATATTTCTAACAAGAACTGGTAGCAAGTAATAGCTGATGCTCATAATTGTGAACTTCAGTAATTACTTAGCTGTTGTTCTGCATGAAGTTATATCAAAATTTCATTTTCTACTTGTCTCATGAAGGCAATGCACATCAATTAAATGTGCTATGCCGGACTATCTCGAAATTGGCCTCTTCATTCGTATATTCGTGTTACAGTAAGGTGATCTAAAGAAGAAATGCATAAATTTGCAATGGTCTTTTATGAACACAATTTTTAAGTAGCCTGTGATATGGAATGATGCAGTTATCATGATGGAACATTTGAAGTCTTCTTTTATTCATCTGTGATAGGGATAGGATATAATGGATTTCCAAGAGGATGCCCTGATGACCAGCTTCCTTGGGCAAAGGTTGGTCTCTCATGACAAACTAAGTTCTCAACTTATTGACAAACATCTTAGTATTTTTTCTTATGTTCAGAAATCAAAAACCAGCAATCCTTTGGAGACAAAGTATCCGTAAGTTAATGAATATGTAAGCTTTTTGATCCAATAAATTTCTGTTTACTAGAAGTCGTGCAATTTGCTATATGTGCTGATCCCTCAGCATTATGAATCCTTGTGCTGAAATAATTATACTTATTTTATGATTTATTTTCCAACCCCTCAATCTTGTTCTTCCTGGCTTTAAATTCTGTTTATAGCTATGTTTGTCATGCTGAAGTCAATGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGGCAGGTTAGTTCTTTTCACCTGCTCTGCATCTCTTTGAAAATTATTGTCTGCTTAAGAATAATGTAAAGTTTCACAGAGCCACACAGACATTCTATTGAAATCTGAATTCTTTACACTTCATAACTGCTTAAGAAATTTATTTGTTTATTGTTTTTCTTTCATTGTACATCAAATTTAGGCTTCTGCATGCTTTGAATGCAGCTGATCAATACTTGGTCTCTCTGTAATCTTTGCAGAAGCTTTATGTGACCATGTTCCCTTGTAATGAATGTGCAAAAATAATCATTCAGGTATAGCAATCAGTTCTTTTCTTTATCTTTATAACCAATTAGACTGAAGAGTTTGAAGATGAAGGCTCGTAGATCTTCACTTAAAAATGTAATGACACAATCCCATATAGATTTTGCCTTAACCATCCGTGGACTTTGTTGCAGTCTGGCGTCTCTGAAGTTATTTATTTTCTTGAGAAGAGGATAAACAATTCAGACGTTGCATATGTTGCTTCTCACAAGTTGCTATCGATGGCTGGTGTAAAGGCAAGTCTTGCTCTGCTACCCTTTGTTGTTCTTTAACTTCAAATTTTATAATATTGCACCATGACTTTTAAACTATAATTTCACTGGACCTCTTAGAACAACTGTTTTATTGACCACACTTCTTTTTTGACGTTCCTTGAACCTCAATATCTCATAAATCGAAATGGCTACATCGGCCCGAAAGTGCGATAAGATATGTAAAAACCACCCAAACTGGAAAACAAATATTATGTATTTACTTGTAGAATCAATTATGTACACTAGAAAAGCGAATTTTTGCATCAGAATGGAAAATGAGTGAGATAAGTTGCAAGTTGTCTGCCTTACGAGTGACTGATGTTACCCTCAAAATTGCAATTGCAGGTCAGAAAACATCAACCCCTGTCTGATCAGATCTTGATCAAGTTCGAGGATCCACGTACA

mRNA sequence

ATGAACTCCCGCGAGCTTTCTCTCGTCTCCACAGCCACCGTATTTGGTGTTCTGGCTTCGGCTGTTGCTTTTCGCTTCTTCTTCAATCCTAAAAAGCACCGTCCTCGATTTGATTTGCCGGGAAATGATGCTCTTTCGAACAAAGCGCCCTCTCAGTGCCCTTTCGATCCTTCCAAACGCCAAGGTTATTTGTCATGGGATGACTATTTCATGGCCATTGCATTCCTGTCTGCAGAAAGATCGAAGGATCCCAATCGGCAGGTCGTTGGTGCGTGCCTGGTTAGTCAAAATGGTGTAATTCTTGGGATAGGATATAATGGATTTCCAAGAGGATGCCCTGATGACCAGCTTCCTTGGGCAAAGAAATCAAAAACCAGCAATCCTTTGGAGACAAAGTATCCCTATGTTTGTCATGCTGAAGTCAATGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGGCAGAAGCTTTATGTGACCATGTTCCCTTGTAATGAATGTGCAAAAATAATCATTCAGTCTGGCGTCTCTGAAGTTATTTATTTTCTTGAGAAGAGGATAAACAATTCAGACGTTGCATATGTTGCTTCTCACAAGTTGCTATCGATGGCTGGTGTCAGAAAACATCAACCCCTGTCTGATCAGATCTTGATCAAGTTCGAGGATCCACGTACA

Coding sequence (CDS)

ATGAACTCCCGCGAGCTTTCTCTCGTCTCCACAGCCACCGTATTTGGTGTTCTGGCTTCGGCTGTTGCTTTTCGCTTCTTCTTCAATCCTAAAAAGCACCGTCCTCGATTTGATTTGCCGGGAAATGATGCTCTTTCGAACAAAGCGCCCTCTCAGTGCCCTTTCGATCCTTCCAAACGCCAAGGTTATTTGTCATGGGATGACTATTTCATGGCCATTGCATTCCTGTCTGCAGAAAGATCGAAGGATCCCAATCGGCAGGTCGTTGGTGCGTGCCTGGTTAGTCAAAATGGTGTAATTCTTGGGATAGGATATAATGGATTTCCAAGAGGATGCCCTGATGACCAGCTTCCTTGGGCAAAGAAATCAAAAACCAGCAATCCTTTGGAGACAAAGTATCCCTATGTTTGTCATGCTGAAGTCAATGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGGCAGAAGCTTTATGTGACCATGTTCCCTTGTAATGAATGTGCAAAAATAATCATTCAGTCTGGCGTCTCTGAAGTTATTTATTTTCTTGAGAAGAGGATAAACAATTCAGACGTTGCATATGTTGCTTCTCACAAGTTGCTATCGATGGCTGGTGTCAGAAAACATCAACCCCTGTCTGATCAGATCTTGATCAAGTTCGAGGATCCACGTACA

Protein sequence

MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIYFLEKRINNSDVAYVASHKLLSMAGVRKHQPLSDQILIKFEDPRT
Homology
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BLAST of MS019927 vs. NCBI nr
Match: XP_022137275.1 (deoxycytidylate deaminase isoform X1 [Momordica charantia])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 224/227 (98.68%), Postives = 224/227 (98.68%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR
Sbjct: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           QGYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGCPDDQLPWA
Sbjct: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YFLEKRINNSDVAYVASHKLLSMAG  VRKHQPLSDQILIKFEDPRT
Sbjct: 181 YFLEKRINNSDVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPRT 226

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BLAST of MS019927 vs. NCBI nr
Match: XP_038895029.1 (deoxycytidylate deaminase [Benincasa hispida])

HSP 1 Score: 407.1 bits (1045), Expect = 9.6e-110
Identity = 199/227 (87.67%), Postives = 210/227 (92.51%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFNPKKHRP+ DL  N AL N  PSQCPFDPSKR
Sbjct: 7   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRPQCDLSRNGALLNNGPSQCPFDPSKR 66

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DDQLPWA
Sbjct: 67  KGFLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDQLPWA 126

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKT+NPLETKYPYVCHAEVNAILNTNHASASGQ+LYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 127 KKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKIIIQSGVSEVI 186

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKRINNS+VAYVASHKLLSMAG  VRKHQPLS+QILIKFEDPRT
Sbjct: 187 YFVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 232

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BLAST of MS019927 vs. NCBI nr
Match: XP_008439719.1 (PREDICTED: deoxycytidylate deaminase isoform X1 [Cucumis melo] >KAA0055333.1 deoxycytidylate deaminase isoform X1 [Cucumis melo var. makuwa] >TYJ99258.1 deoxycytidylate deaminase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 407.1 bits (1045), Expect = 9.6e-110
Identity = 200/227 (88.11%), Postives = 208/227 (91.63%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFNPKKHR RFDL  N AL N   SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DDQLPWA
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKT+NPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKRINNS+VAYVASHKLLSMAG  VRKHQPLSDQILIKFEDP T
Sbjct: 181 YFVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

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BLAST of MS019927 vs. NCBI nr
Match: XP_022955223.1 (deoxycytidylate deaminase isoform X1 [Cucurbita moschata])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 197/227 (86.78%), Postives = 209/227 (92.07%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSREL+LVSTA V G +ASA+A RFFFNPKKHRP+FDL  NDA  N   SQCPFDPSKR
Sbjct: 1   MNSRELALVSTAAVVGAVASAIACRFFFNPKKHRPQFDLSRNDAPLNNGHSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
            GYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGCPDD+LPWA
Sbjct: 61  NGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCPDDKLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQ+LYVTMFPCNECAK+IIQSGVSEVI
Sbjct: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKVIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKR+NNS VAY+ASHKLLSMAG  VRKHQP S+QILIKFE+P T
Sbjct: 181 YFIEKRMNNS-VAYIASHKLLSMAGVKVRKHQPWSNQILIKFEEPHT 225

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BLAST of MS019927 vs. NCBI nr
Match: KAG6573132.1 (Deoxycytidylate deaminase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 196/227 (86.34%), Postives = 208/227 (91.63%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSREL+LVSTA V G +ASA+A RFFFNPKKHRP+FDL  NDA  N   SQCPFDPSKR
Sbjct: 1   MNSRELALVSTAAVVGAVASAIACRFFFNPKKHRPQFDLSRNDAPLNNGHSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
            GYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGCPDD+LPWA
Sbjct: 61  NGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCPDDKLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQ+LYVTMFPCNECAK+IIQSGVSEVI
Sbjct: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKVIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKR+NNS VAY+ASHKLLSMAG  VRKHQP S+QI IKFE+P T
Sbjct: 181 YFIEKRMNNS-VAYIASHKLLSMAGVKVRKHQPWSNQISIKFEEPHT 225

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BLAST of MS019927 vs. ExPASy Swiss-Prot
Match: Q5RC69 (Deoxycytidylate deaminase OS=Pongo abelii OX=9601 GN=DCTD PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 94/165 (56.97%), Postives = 118/165 (71.52%), Query Frame = 0 

Query: 59  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 118
           KR  YL W +YFMA+AFLSA+RSKDPN Q VGAC+V+    I+GIGYNG P GC DDQLP
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDQLP 67

Query: 119 WAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSE 178
           W + +K  N L+TKYPYVCHAE+NAI+N N     G  +YV +FPCNECAK+IIQ+G+ E
Sbjct: 68  WRRTAK--NKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKE 127

Query: 179 VIYFLEKRINNSDVAYVASHKLLSMAGV--RKHQPLSDQILIKFE 222
           VI F+  + ++SD A  A+  L  MAGV  RK  P   +I+I F+
Sbjct: 128 VI-FMSDKYHDSDEA-TAARLLFDMAGVTFRKFIPKCSKIVIDFD 167

[Close]
BLAST of MS019927 vs. ExPASy Swiss-Prot
Match: P32321 (Deoxycytidylate deaminase OS=Homo sapiens OX=9606 GN=DCTD PE=1 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 2.7e-46
Identity = 92/165 (55.76%), Postives = 118/165 (71.52%), Query Frame = 0 

Query: 59  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 118
           KR  YL W +YFMA+AFLSA+RSKDPN Q VGAC+V+    I+GIGYNG P GC DD LP
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLP 67

Query: 119 WAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSE 178
           W + ++  N L+TKYPYVCHAE+NAI+N N     G  +YV +FPCNECAK+IIQ+G+ E
Sbjct: 68  WRRTAE--NKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKE 127

Query: 179 VIYFLEKRINNSDVAYVASHKLLSMAGV--RKHQPLSDQILIKFE 222
           VI F+  + ++SD A  A+  L +MAGV  RK  P   +I+I F+
Sbjct: 128 VI-FMSDKYHDSDEA-TAARLLFNMAGVTFRKFIPKCSKIVIDFD 167

[Close]
BLAST of MS019927 vs. ExPASy Swiss-Prot
Match: Q8K2D6 (Deoxycytidylate deaminase OS=Mus musculus OX=10090 GN=Dctd PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 88/165 (53.33%), Postives = 116/165 (70.30%), Query Frame = 0 

Query: 59  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 118
           KR  YL W +YFMA+AFLSA+RSKDP+ Q VGAC+V+    I+GIGYNG P GC DD LP
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPSSQ-VGACIVNTENKIVGIGYNGMPNGCSDDLLP 67

Query: 119 WAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSE 178
           W + ++  N L+TKYPYVCHAE+NAI+N N A   G  +YV +FPCNECAK+IIQ+G+ E
Sbjct: 68  WRRTAE--NKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKE 127

Query: 179 VIYFLEKRINNSDVAYVASHKLLSMAGV--RKHQPLSDQILIKFE 222
           VI+  +K  ++ +    A+  L  +AGV  RK  P   +I+I F+
Sbjct: 128 VIFMSDKYHDSEET--TAARLLFKLAGVTFRKFTPKYSKIVIDFD 167

[Close]
BLAST of MS019927 vs. ExPASy Swiss-Prot
Match: Q5M9G0 (Deoxycytidylate deaminase OS=Rattus norvegicus OX=10116 GN=Dctd PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 88/165 (53.33%), Postives = 116/165 (70.30%), Query Frame = 0 

Query: 59  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 118
           KR  YL W +YFMA+AFLSA+RSKDP+ Q VGAC+V+    I+GIGYNG P GC DD LP
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPSSQ-VGACIVNTENKIVGIGYNGMPNGCSDDLLP 67

Query: 119 WAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSE 178
           W + ++  N L+TKYPYVCHAE+NAI+N N A   G  +YV +FPCNECAK+IIQ+G+ E
Sbjct: 68  WRRTAE--NKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKE 127

Query: 179 VIYFLEKRINNSDVAYVASHKLLSMAGV--RKHQPLSDQILIKFE 222
           VI+  +K  ++ +    A+  L  +AGV  RK  P   +I+I F+
Sbjct: 128 VIFMSDKYHDSEET--TAARLLFKLAGVTFRKFTPKYSKIVIDFD 167

[Close]
BLAST of MS019927 vs. ExPASy Swiss-Prot
Match: Q9VWA2 (Probable deoxycytidylate deaminase OS=Drosophila melanogaster OX=7227 GN=CG6951 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.0e-43
Identity = 90/168 (53.57%), Postives = 111/168 (66.07%), Query Frame = 0 

Query: 59  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 118
           KR+ YL WDDYFMA + LSA+RSKDP  Q VGAC+V     I+ IGYNGFPR C DD  P
Sbjct: 21  KRKEYLHWDDYFMATSLLSAKRSKDPVTQ-VGACIVDSQNRIVAIGYNGFPRNCSDDVFP 80

Query: 119 WAKKSKTS---NPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSG 178
           W+K  K S   +PLE K  YV HAE NAILN+N  S SG +LY T+FPCNECAK+IIQ G
Sbjct: 81  WSKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECAKLIIQVG 140

Query: 179 VSEVIYFLEKRINNSDVAYVASHKLLSMAGV--RKHQPLSDQILIKFE 222
           +S+V+Y  +K  +     Y AS ++L   GV  ++H P    I I F+
Sbjct: 141 ISQVLYLSDKYADKP--TYRASKRMLDAVGVEYKRHIPQKKTITIDFD 185

[Close]
BLAST of MS019927 vs. ExPASy TrEMBL
Match: A0A6J1C676 (deoxycytidylate deaminase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008774 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 224/227 (98.68%), Postives = 224/227 (98.68%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR
Sbjct: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           QGYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGCPDDQLPWA
Sbjct: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YFLEKRINNSDVAYVASHKLLSMAG  VRKHQPLSDQILIKFEDPRT
Sbjct: 181 YFLEKRINNSDVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPRT 226

[Close]
BLAST of MS019927 vs. ExPASy TrEMBL
Match: A0A5A7UHA6 (Deoxycytidylate deaminase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004700 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.6e-110
Identity = 200/227 (88.11%), Postives = 208/227 (91.63%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFNPKKHR RFDL  N AL N   SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DDQLPWA
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKT+NPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKRINNS+VAYVASHKLLSMAG  VRKHQPLSDQILIKFEDP T
Sbjct: 181 YFVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

[Close]
BLAST of MS019927 vs. ExPASy TrEMBL
Match: A0A1S3AZF4 (deoxycytidylate deaminase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484432 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.6e-110
Identity = 200/227 (88.11%), Postives = 208/227 (91.63%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFNPKKHR RFDL  N AL N   SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DDQLPWA
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKT+NPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKRINNS+VAYVASHKLLSMAG  VRKHQPLSDQILIKFEDP T
Sbjct: 181 YFVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

[Close]
BLAST of MS019927 vs. ExPASy TrEMBL
Match: A0A6J1GTC6 (deoxycytidylate deaminase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457251 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108
Identity = 197/227 (86.78%), Postives = 209/227 (92.07%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSREL+LVSTA V G +ASA+A RFFFNPKKHRP+FDL  NDA  N   SQCPFDPSKR
Sbjct: 1   MNSRELALVSTAAVVGAVASAIACRFFFNPKKHRPQFDLSRNDAPLNNGHSQCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
            GYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGCPDD+LPWA
Sbjct: 61  NGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCPDDKLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQ+LYVTMFPCNECAK+IIQSGVSEVI
Sbjct: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKVIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKR+NNS VAY+ASHKLLSMAG  VRKHQP S+QILIKFE+P T
Sbjct: 181 YFIEKRMNNS-VAYIASHKLLSMAGVKVRKHQPWSNQILIKFEEPHT 225

[Close]
BLAST of MS019927 vs. ExPASy TrEMBL
Match: A0A0A0LWP2 (CMP/dCMP-type deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050500 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 196/227 (86.34%), Postives = 206/227 (90.75%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60
           MNSR+L+LVSTA V     SA+A RFFF+PKKHR RFDL  N AL N   S+CPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLSAFTSAIACRFFFSPKKHRSRFDLSRNGALLNNGSSRCPFDPSKR 60

Query: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWA 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DDQLPWA
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDQLPWA 120

Query: 121 KKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180
           KKSKT+NPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI
Sbjct: 121 KKSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVI 180

Query: 181 YFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFEDPRT 226
           YF+EKRINNS+VAY ASHKLLSMAG  VRKHQPLSDQILIKFEDP T
Sbjct: 181 YFVEKRINNSNVAYFASHKLLSMAGVKVRKHQPLSDQILIKFEDPCT 226

[Close]
BLAST of MS019927 vs. TAIR 10
Match: AT3G48540.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 350.9 bits (899), Expect = 7.6e-97
Identity = 177/226 (78.32%), Postives = 195/226 (86.28%), Query Frame = 0 

Query: 1   MNSRELSLVSTATVFGVLASAVAFRFF-FNPKKHRPR-FDLPGNDALSNKAPSQCPFDPS 60
           MNSR+L+LVST+ +FG L SA+AFRFF  NPK  + R F      A+S K P+  PF P 
Sbjct: 1   MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRKFTSTEISAISRKFPALDPFSPL 60

Query: 61  KRQGYLSWDDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLP 120
           KR GYLSWDDYFMAIAFLSAERSKDPNRQ VGACLVSQNGVILGIGYNGFPRGC DD+LP
Sbjct: 61  KRNGYLSWDDYFMAIAFLSAERSKDPNRQ-VGACLVSQNGVILGIGYNGFPRGCSDDKLP 120

Query: 121 WAKKSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSE 180
           WAKKS+T +PLETKYPYVCHAEVNAILNTNHASA+GQKLYVTMFPCNECAKII+QSGV+E
Sbjct: 121 WAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAE 180

Query: 181 VIYFLEKRINNSDVAYVASHKLLSMAG--VRKHQPLSDQILIKFED 223
           VIYF+EKR N+SDVAYVASHKLLSMA   VRKHQP  D+ILIKFE+
Sbjct: 181 VIYFVEKRPNDSDVAYVASHKLLSMANVKVRKHQPEMDEILIKFEE 225

[Close]
BLAST of MS019927 vs. TAIR 10
Match: AT1G68720.1 (tRNA arginine adenosine deaminase )

HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04
Identity = 35/133 (26.32%), Postives = 59/133 (44.36%), Query Frame = 0 

Query: 67   DDYFMAIAFLSAERSKDPNRQVVGACLVSQNGVILGIGYNGFPRGCPDDQLPWAKKSKTS 126
            D+ FM  A + A+++ D     VGA LV  +G I+  GY                     
Sbjct: 1110 DEIFMREALVEAKKAADTWEVPVGAVLV-HDGKIIARGY--------------------- 1169

Query: 127  NPLETKYPYVCHAEVNAILNTNHASASGQ----KLYVTMFPCNECAKIIIQSGVSEVIYF 186
            N +E       HAE+  I   + A  S +     LYVT+ PC  CA  I+Q+ V+ +++ 
Sbjct: 1170 NLVEELRDSTAHAEMICIREGSKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWG 1220

Query: 187  LEKRINNSDVAYV 196
               ++  +D +++
Sbjct: 1230 APNKLLGADGSWI 1220

The following BLAST results are available for this feature:
BLAST of MS019927 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137275.13.1e-12498.68deoxycytidylate deaminase isoform X1 [Momordica charantia][more]
XP_038895029.19.6e-11087.67deoxycytidylate deaminase [Benincasa hispida][more]
XP_008439719.19.6e-11088.11PREDICTED: deoxycytidylate deaminase isoform X1 [Cucumis melo] >KAA0055333.1 deo... [more]
XP_022955223.14.0e-10886.78deoxycytidylate deaminase isoform X1 [Cucurbita moschata][more]
KAG6573132.12.0e-10786.34Deoxycytidylate deaminase, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of MS019927 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5RC691.9e-4756.97Deoxycytidylate deaminase OS=Pongo abelii OX=9601 GN=DCTD PE=2 SV=1[more]
P323212.7e-4655.76Deoxycytidylate deaminase OS=Homo sapiens OX=9606 GN=DCTD PE=1 SV=2[more]
Q8K2D63.0e-4553.33Deoxycytidylate deaminase OS=Mus musculus OX=10090 GN=Dctd PE=2 SV=1[more]
Q5M9G03.0e-4553.33Deoxycytidylate deaminase OS=Rattus norvegicus OX=10116 GN=Dctd PE=2 SV=1[more]
Q9VWA28.0e-4353.57Probable deoxycytidylate deaminase OS=Drosophila melanogaster OX=7227 GN=CG6951 ... [more]
BLAST of MS019927 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C6761.5e-12498.68deoxycytidylate deaminase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5A7UHA64.6e-11088.11Deoxycytidylate deaminase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3AZF44.6e-11088.11deoxycytidylate deaminase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484432 PE=... [more]
A0A6J1GTC62.0e-10886.78deoxycytidylate deaminase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114572... [more]
A0A0A0LWP21.3e-10786.34CMP/dCMP-type deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=... [more]
BLAST of MS019927 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48540.17.6e-9778.32Cytidine/deoxycytidylate deaminase family protein [more]
AT1G68720.14.4e-0426.32tRNA arginine adenosine deaminase [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 56..225
e-value: 1.4E-58
score: 199.2
NoneNo IPR availablePIRSRPIRSR006019-1PIRSR006019-1coord: 59..187
e-value: 6.4E-44
score: 147.1
NoneNo IPR availablePIRSRPIRSR006019-2PIRSR006019-2coord: 59..187
e-value: 6.4E-44
score: 147.1
NoneNo IPR availablePANTHERPTHR11086:SF21CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEINcoord: 1..222
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 65..182
e-value: 3.5E-24
score: 84.6
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 65..208
score: 23.434143
IPR015517Deoxycytidylate deaminase-relatedPANTHERPTHR11086DEOXYCYTIDYLATE DEAMINASE-RELATEDcoord: 1..222
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 138..171
IPR035105Deoxycytidylate deaminase domainCDDcd01286deoxycytidylate_deaminasecoord: 67..181
e-value: 1.355E-51
score: 161.674
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 67..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019927.1MS019927.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding