MS019550 (gene) Bitter gourd (TR) v1

Overview
NameMS019550
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMonodehydroascorbate reductase
Locationscaffold729: 371748 .. 371864 (-)
RNA-Seq ExpressionMS019550
SyntenyMS019550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACTGATACTTCTTTTCTTGGTCTGCAGGGATACGCAGCTAGGGAGTTTGTGAAATTGGGGCTCCAACCTGGCGAGCTAGCAATTATTTCCAAGGAGGCGGTATGTTGTCATTTG

mRNA sequence

CTTACTGATACTTCTTTTCTTGGTCTGCAGGGATACGCAGCTAGGGAGTTTGTGAAATTGGGGCTCCAACCTGGCGAGCTAGCAATTATTTCCAAGGAGGCGGTATGTTGTCATTTG

Coding sequence (CDS)

CTTACTGATACTTCTTTTCTTGGTCTGCAGGGATACGCAGCTAGGGAGTTTGTGAAATTGGGGCTCCAACCTGGCGAGCTAGCAATTATTTCCAAGGAGGCGGTATGTTGTCATTTG

Protein sequence

LTDTSFLGLQGYAAREFVKLGLQPGELAIISKEAVCCHL
Homology
BLAST of MS019550 vs. ExPASy Swiss-Prot
Match: Q42711 (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-05
Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREFVK GL PGELAIISKEAV
Sbjct: 18 GYAAREFVKQGLNPGELAIISKEAV 42

BLAST of MS019550 vs. ExPASy Swiss-Prot
Match: Q40977 (Monodehydroascorbate reductase OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-05
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREFVK G+ PGELAIISKEAV
Sbjct: 17 GYAAREFVKQGVHPGELAIISKEAV 41

BLAST of MS019550 vs. ExPASy Swiss-Prot
Match: Q652L6 (Monodehydroascorbate reductase 3, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=MDAR3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-04
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF K G++PGELAIISKEAV
Sbjct: 19 GYAAREFAKQGVKPGELAIISKEAV 43

BLAST of MS019550 vs. ExPASy Swiss-Prot
Match: Q43497 (Monodehydroascorbate reductase OS=Solanum lycopersicum OX=4081 GN=AFRR PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-04
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF K G++PGELAIISKEAV
Sbjct: 18 GYAAREFAKQGVKPGELAIISKEAV 42

BLAST of MS019550 vs. ExPASy Swiss-Prot
Match: Q6ZJ08 (Monodehydroascorbate reductase 4, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=MDAR4 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 3.7e-04
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF K G++PGELAIISKE+V
Sbjct: 19 GYAAREFAKQGVKPGELAIISKESV 43

BLAST of MS019550 vs. ExPASy TrEMBL
Match: Q5XWE3 (Monodehydroascorbate reductase II (Fragment) OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.6e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 6  FLGLQGYAAREFVKLGLQPGELAIISKEAV 36
          +L LQGYAAREFVK G+ PGELAIISKEAV
Sbjct: 5  YLKLQGYAAREFVKQGVHPGELAIISKEAV 34

BLAST of MS019550 vs. TAIR 10
Match: AT3G52880.2 (monodehydroascorbate reductase 1 )

HSP 1 Score: 43.9 bits (102), Expect = 3.4e-05
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0

Query: 9  LQGYAAREFVKLGLQPGELAIISKEAV 36
          L GYAA+EF   G+QPGELA+ISKEAV
Sbjct: 48 LIGYAAKEFANQGVQPGELAVISKEAV 74

BLAST of MS019550 vs. TAIR 10
Match: AT3G52880.1 (monodehydroascorbate reductase 1 )

HSP 1 Score: 43.5 bits (101), Expect = 4.5e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAA+EF   G+QPGELA+ISKEAV
Sbjct: 18 GYAAKEFANQGVQPGELAVISKEAV 42

BLAST of MS019550 vs. TAIR 10
Match: AT3G09940.1 (monodehydroascorbate reductase )

HSP 1 Score: 42.0 bits (97), Expect = 1.3e-04
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF   GL+PGELAIISKE V
Sbjct: 19 GYAAREFSNQGLKPGELAIISKEPV 43

BLAST of MS019550 vs. TAIR 10
Match: AT3G09940.2 (monodehydroascorbate reductase )

HSP 1 Score: 42.0 bits (97), Expect = 1.3e-04
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF   GL+PGELAIISKE V
Sbjct: 19 GYAAREFSNQGLKPGELAIISKEPV 43

BLAST of MS019550 vs. TAIR 10
Match: AT5G03630.1 (Pyridine nucleotide-disulphide oxidoreductase family protein )

HSP 1 Score: 40.0 bits (92), Expect = 5.0e-04
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 0

Query: 11 GYAAREFVKLGLQPGELAIISKEAV 36
          GYAAREF   G++PGELAIIS+E V
Sbjct: 19 GYAAREFFNQGVKPGELAIISREQV 43

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Q427113.4e-0592.00Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus OX=3659 PE=2... [more]
Q409777.5e-0588.00Monodehydroascorbate reductase OS=Pisum sativum OX=3888 PE=1 SV=1[more]
Q652L61.7e-0484.00Monodehydroascorbate reductase 3, cytosolic OS=Oryza sativa subsp. japonica OX=3... [more]
Q434971.7e-0484.00Monodehydroascorbate reductase OS=Solanum lycopersicum OX=4081 GN=AFRR PE=1 SV=1[more]
Q6ZJ083.7e-0480.00Monodehydroascorbate reductase 4, cytosolic OS=Oryza sativa subsp. japonica OX=3... [more]
Match NameE-valueIdentityDescription
Q5XWE36.6e-0483.33Monodehydroascorbate reductase II (Fragment) OS=Pisum sativum OX=3888 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G52880.23.4e-0574.07monodehydroascorbate reductase 1 [more]
AT3G52880.14.5e-0576.00monodehydroascorbate reductase 1 [more]
AT3G09940.11.3e-0480.00monodehydroascorbate reductase [more]
AT3G09940.21.3e-0480.00monodehydroascorbate reductase [more]
AT5G03630.15.0e-0472.00Pyridine nucleotide-disulphide oxidoreductase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS019550.1MS019550.1mRNA