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MS019056 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAACTCAGCCTTCTTTATGCTCATTTTCACCATAGCCTTCTTCATCTCTTCCTCCTTTCTCGCCGTCGCAGCCTTGAGCGGTGACCGTACTCTCAGCTGGCTCTCGACGGAATCTCGATGCCACGGGCGTTCGATAAACGAGTGCATCATGAATAATATTGAGTTTGAATTGGATTCTGAGATCAATCGCCGTATCTTGGCTACTTCGAGCTACATAAGTTACAAGTCATTGAAGGCAAACAACATTCCATGCTCTCGTAGAGGCTCTTCGTACTACAATTGCCAGCCAGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCACCGTCATTACTCGTTGCAGAAAC ATGGGCAACTCAGCCTTCTTTATGCTCATTTTCACCATAGCCTTCTTCATCTCTTCCTCCTTTCTCGCCGTCGCAGCCTTGAGCGGTGACCGTACTCTCAGCTGGCTCTCGACGGAATCTCGATGCCACGGGCGTTCGATAAACGAGTGCATCATGAATAATATTGAGTTTGAATTGGATTCTGAGATCAATCGCCGTATCTTGGCTACTTCGAGCTACATAAGTTACAAGTCATTGAAGGCAAACAACATTCCATGCTCTCGTAGAGGCTCTTCGTACTACAATTGCCAGCCAGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCACCGTCATTACTCGTTGCAGAAAC ATGGGCAACTCAGCCTTCTTTATGCTCATTTTCACCATAGCCTTCTTCATCTCTTCCTCCTTTCTCGCCGTCGCAGCCTTGAGCGGTGACCGTACTCTCAGCTGGCTCTCGACGGAATCTCGATGCCACGGGCGTTCGATAAACGAGTGCATCATGAATAATATTGAGTTTGAATTGGATTCTGAGATCAATCGCCGTATCTTGGCTACTTCGAGCTACATAAGTTACAAGTCATTGAAGGCAAACAACATTCCATGCTCTCGTAGAGGCTCTTCGTACTACAATTGCCAGCCAGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCACCGTCATTACTCGTTGCAGAAAC MGNSAFFMLIFTIAFFISSSFLAVAALSGDRTLSWLSTESRCHGRSINECIMNNIEFELDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRN Homology
BLAST of MS019056 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata]) HSP 1 Score: 197.2 bits (500), Expect = 7.8e-47 Identity = 100/122 (81.97%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS019056 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima]) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46 Identity = 100/122 (81.97%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of MS019056 vs. NCBI nr
Match: KAG6581259.1 (Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017986.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195.3 bits (495), Expect = 3.0e-46 Identity = 99/122 (81.15%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of MS019056 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46 Identity = 99/122 (81.15%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of MS019056 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa]) HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0
BLAST of MS019056 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-25 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of MS019056 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23 Identity = 63/115 (54.78%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of MS019056 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 0
BLAST of MS019056 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 9.1e-22 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of MS019056 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of MS019056 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47 Identity = 100/122 (81.97%), Postives = 112/122 (91.80%), Query Frame = 0
BLAST of MS019056 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.5e-47 Identity = 100/122 (81.97%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of MS019056 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 7.9e-45 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0
BLAST of MS019056 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42 Identity = 95/123 (77.24%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of MS019056 vs. ExPASy TrEMBL
Match: A0A1U8APG9 (rapid alkalinization factor-like OS=Nelumbo nucifera OX=4432 GN=LOC104606140 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27 Identity = 69/117 (58.97%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of MS019056 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 110.5 bits (275), Expect = 9.0e-25 Identity = 63/115 (54.78%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of MS019056 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 0
BLAST of MS019056 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 104.4 bits (259), Expect = 6.4e-23 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of MS019056 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 100.5 bits (249), Expect = 9.3e-22 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of MS019056 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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