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MS019030 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGGTCAACAACACTGTCAATGAAATTCCTCCGAACATGACCATCTACATTAACAATCTCAACGAGAAAATCAAGCTGGAAGGTATTCTTAGGGGAGTAGCTTCTTTAATGGTTTGAAATGTGATGTGATTTTTTATTGTTTTACTCCTTGGTGAGAGCAGAATTGAAGAAGTCGCTGAACGCGGTTTTCTCACAGTTCGGGAAGATTCTGGAAGTATTGGCTTTCAAGACCTTGAAGCACAAAGGACAGGCTTGGGTTGTGTTCGACGAAGTCTCTTCCGCCACTAATGCGCTTAGACAAATGCAGGGCTTTCCTTTCTATGATAAGCCTATGGTAATGTGCTTACTAGCCTTTCCGATCGCGAGAATTTAATTTTGTTCGTTGAATTGCAGGTTAAGCACTTGAGATGAAGATTAGAGTTATTAGGTCTTGCTGTAAAAAGATGGTTATCGCTTCGTTCGTATGAGCACTAATTCGAGTCATGGTTGTGAATAGTAGAGTACTGATACATTCTTCTGAGAAACGAAATGGGAATTGTGTTTGGATCATATTGCGTCTTAGACAGTTGAGACGTACTCAAACATGGCTGGTAAATAATGTGGTTTTGTTGATAATTCGTTGCTGATTTCATGTCGGTAAGGTTAACGGACAATTCATTGCTTGGATGATCAAGCATGAAACACAATATGCCCTTACCAGGCAATCTTGAAGTGCTTACTTCCTAAATATATCACATTGCAGACGTTTATATTTTCTTCACCTGAGCTTTATGACATTGATAATATTTTGACACAAATCAGATAGTTGTCAAACTTGTCTTCTGCATATCTATTGAAAGCTCTGTATGTCTTGTTTGTCTACCTAGGTTTTATATCTTTTACAGTTAGTATTAAGTGCCAGCAATTTTTCATATCATTTGTTGCTCTGGTCAACTATTCGTCTTTTGTTACCTTGACAAAGTTTTTGGGGGTATAGTGCAATATTAAGCTAAATGTTGTTGCTTTGCAATCATGTAGAGGATACAATATGCAAAGACGAAGTCAGATGTAGTAGCAAAGTCCGATGGTACATTTGTTCCCCGGGAGAAACGAAAGAGACATGAAGAGAAGGGTACTATTTTCTTTATTTTATATTTTACAAATTTAAATTCAAACAGGTTTGAATAGCTTGGTGTATGAAGATTTACTTGAGCATCTGATACTATATTTGAGTGTCGTTGCAACTTTTATACTTTATTTCATTTTGTGTTATTTTTGTCAATGCGAAATGCTCTGCTATATTATTCTCTTATTTCTATTTGTACTTTGGATACCGCATATGACTAATGTTCAATTACAGTAAAGGAAAACGTTAAAAAACAGCATACTTGCGGAAGAAATCTACTAGTTATGTGGAATAATAAGCAGTTGTAATGTAATGCATGTATTTTATTCAAAGCTATTTGAGCAAGATCCAGGTCTTGGGGAAAGTAACTTTTTCAGAAAATGGAGGAAAATGTTGCCCTATTATTTTATGTAGCAGTGTTTTGATCAAGATCTTTACTTTATCTTGTGTGGTAGGGAGGAAGAAAAAAGAGCAGCATGATGCTAATCAAGCTGGGATGGGTCTCAATCCTGCCTTTTCTGGAGCATATGGTGCAACTGCGGTTAGTATCTCTATTTAATCTCTAAACTTTAGTTTTATATAAATTCATTTATTTTTTATTTTTCATTGCATAATGGTTTTTCACAATATATCCTTTCTAACTTCAGTCTTGAGCCTTAGATACAATCTAAAAAGCACAGACACAGACATGAGACATGGATAAGACACAACACAGACATGTTAACATGTTAATTTCTTAAAAAATATGAAACAGACACGTTGAGGACACATTCTGTATATTTTAAAATGTATATATACTGTTATATTTAATAATTAAAAATAAATAGAAGGGTCAATTAAGAACCATCATGGGTGGCCCATTAGTCCAAAGGGCTAGGGTTAATTAAGAGAGAATGGGTTCAAACTCTATGATGGCTACCTACCTTTGGAATTAGTAATTTCTACGTATTTTCTGGTACCAAATGTTGTAAGGTCAGGCAGTTGTCCTGTGAGATTAGTCCGAGGTGTGCGTAAACTGGCCCGGACAGTCACGGATATAAAAAAAAAAAAATAGAAGGGTCAATTAAGACTCAAAAAGTTAGGTAAAATGTACTTCACTTAGAACACAAGTTAAGTAAATATCAAATAATCAGGAATAAAAGAATTCTGCTGAAGGAAAAGAAAAAATATCTGTTAGTTGTAACTTGTAGCTTGTTTTGTTATGCCTTTGTTTAGAAAAATATTAAAAAAAACAAAAACAAAAACCTGAAGGTGCTTTCTGTAGTGCGATTTGGCGACCTGCCACTTTCTCAATATGGATGCAATCCCGTTTAAAAGGAGGGCTTCTCTATTATAAACCTAATTGATTTCAAACAAATTGGACAAGAGAACTCCTTCAACCGAAGAAGACAAGTACCTTCTTTCTTCCTTAATTGGTTATTTCTTAGTAAGTTTGGGTCTCTCTCTCTGGAAGTTCAAGTTTTTGCTTTGTCTAATAGAAAGCTAGAAAGTACTTTTTTGTTTTAAGACAAAAACGCATTTTCTGCCAACATGAGCTTAACTCAGCGGTAATCAAGAGGTCGTGAGGTCATGAGTTTGAATCTCCACATCTCCAATTGTTGTATTAAAAGGGAAAAAAAAAGAAAGAAAAAAACGCAGTTTAGGAAAGCAAAGCTCCGACTCCCTAAAAGGCATCTGATACATTAGACATGTCTGAGGCATTGTAATATAACTCCTACTAAATACTGATATTCAGAGAAAGAGTGGCTTTACGGAAGTCTCCTCCAGCCGCTTAGAGAGTGTTGGTTCTCTCTCTATCCAGGACTTCCCAAAACAAACAAAACATAAACTTACACAACAAGATCTTAAAGTATATAAGGACCAGCTAACTAACTTTAAGGGGGTGAATTTTCTTCTTTACCCTACCTAACATAACATAAGTATTAATTATTGGAGGCCTCGCAGGTGTATTTGAAATTCGAAATTTGTTTGGCGTATCATACACGTGTCTGAATGAATCTGTGTTTGATGCGTGTCCACAAAACAGAGTGTTCATGCTTCTTTAGGATACCATATTTAGATTCTCCAACGTAGTCAATTAAGTATCATATTTTTCATCTGCCGCTAATAAATGTATTCTAAGGGCTTGGTTGGCATGATGGCAAAATATAAGATCATAAAGAAATAAGAGGTAGAATTTCACTTTTAGAGTCGAATTTTACTTTTTAAAAATAGTGCTCTCTCATCCTATTTCATTTCCCACTCTTTTCATTGCAATAAGAACGATACATAATTTGTTTGTTATACCATGAAAATAGGAAGCATTTCATTCTTTTACTCCCTGCTGAGTTGGGAGAGTCGATTTTCAGTTTTCGTTATTGTTTTGAACTTTATCCACCTTTTATTTCCTTATACCCAGAGAGCGATAGAAATGAAGGAATATATATTGGGTGTTTATTTCCATTTATTGCTTTGGCATTTCATACATCGTGATTGTTAACAAACCCTTTGCCAATTGATTCAATGCTCTAATTGGTCGGACTTAGTGGGTAGCTTTTTGTCGAGTGTATGTACTCTTGTATGCTGTTACCAATTGAATATAGGATTTTAAGGCATCAAAACTTGGTCGGCTGTTATCATATGAGTAACTTTTGTACTGAATTCTTAAAATTATGTGTTACCTAAAGAACACTCTTTCCTTTCCCTCTTCTGAAAATGGTGCAGCACTCTCAAGTATCTTATCCAGGCGGAGTTATGGTGCCAGAGGCTCCTGCCCCACCAAATAGCATTTTGTTTGTACAGAATCTTCCTCACGAGACGACTCCGATGATGCTACAGATGCTTTTCTGTCAGTATCCTGGTTTTAAGGAGGTTCGAATGGTTGAAGCAAAGCCAGGCATCGCATTTGTCGAGTACAGCGATGAGGTACAATCAACAGTTGCCATGCAAGCACTACAAGGTTTTAAGATGAACCCGCAAAATTCGATGTTGATAACCTATGCGAAGAAA ATGGCGGAGGTCAACAACACTGTCAATGAAATTCCTCCGAACATGACCATCTACATTAACAATCTCAACGAGAAAATCAAGCTGGAAGCAGAATTGAAGAAGTCGCTGAACGCGGTTTTCTCACAGTTCGGGAAGATTCTGGAAGTATTGGCTTTCAAGACCTTGAAGCACAAAGGACAGGCTTGGGTTGTGTTCGACGAAGTCTCTTCCGCCACTAATGCGCTTAGACAAATGCAGGGCTTTCCTTTCTATGATAAGCCTATGAGGATACAATATGCAAAGACGAAGTCAGATGTAGTAGCAAAGTCCGATGGTACATTTGTTCCCCGGGAGAAACGAAAGAGACATGAAGAGAAGGGGAGGAAGAAAAAAGAGCAGCATGATGCTAATCAAGCTGGGATGGGTCTCAATCCTGCCTTTTCTGGAGCATATGGTGCAACTGCGCACTCTCAAGTATCTTATCCAGGCGGAGTTATGGTGCCAGAGGCTCCTGCCCCACCAAATAGCATTTTGTTTGTACAGAATCTTCCTCACGAGACGACTCCGATGATGCTACAGATGCTTTTCTGTCAGTATCCTGGTTTTAAGGAGGTTCGAATGGTTGAAGCAAAGCCAGGCATCGCATTTGTCGAGTACAGCGATGAGGTACAATCAACAGTTGCCATGCAAGCACTACAAGGTTTTAAGATGAACCCGCAAAATTCGATGTTGATAACCTATGCGAAGAAA ATGGCGGAGGTCAACAACACTGTCAATGAAATTCCTCCGAACATGACCATCTACATTAACAATCTCAACGAGAAAATCAAGCTGGAAGCAGAATTGAAGAAGTCGCTGAACGCGGTTTTCTCACAGTTCGGGAAGATTCTGGAAGTATTGGCTTTCAAGACCTTGAAGCACAAAGGACAGGCTTGGGTTGTGTTCGACGAAGTCTCTTCCGCCACTAATGCGCTTAGACAAATGCAGGGCTTTCCTTTCTATGATAAGCCTATGAGGATACAATATGCAAAGACGAAGTCAGATGTAGTAGCAAAGTCCGATGGTACATTTGTTCCCCGGGAGAAACGAAAGAGACATGAAGAGAAGGGGAGGAAGAAAAAAGAGCAGCATGATGCTAATCAAGCTGGGATGGGTCTCAATCCTGCCTTTTCTGGAGCATATGGTGCAACTGCGCACTCTCAAGTATCTTATCCAGGCGGAGTTATGGTGCCAGAGGCTCCTGCCCCACCAAATAGCATTTTGTTTGTACAGAATCTTCCTCACGAGACGACTCCGATGATGCTACAGATGCTTTTCTGTCAGTATCCTGGTTTTAAGGAGGTTCGAATGGTTGAAGCAAAGCCAGGCATCGCATTTGTCGAGTACAGCGATGAGGTACAATCAACAGTTGCCATGCAAGCACTACAAGGTTTTAAGATGAACCCGCAAAATTCGATGTTGATAACCTATGCGAAGAAA MAEVNNTVNEIPPNMTIYINNLNEKIKLEAELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVVAKSDGTFVPREKRKRHEEKGRKKKEQHDANQAGMGLNPAFSGAYGATAHSQVSYPGGVMVPEAPAPPNSILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK Homology
BLAST of MS019030 vs. NCBI nr
Match: XP_022155307.1 (U1 small nuclear ribonucleoprotein A [Momordica charantia]) HSP 1 Score: 468.8 bits (1205), Expect = 2.9e-128 Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0
BLAST of MS019030 vs. NCBI nr
Match: KAA0044384.1 (U1 small nuclear ribonucleoprotein A [Cucumis melo var. makuwa]) HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125 Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of MS019030 vs. NCBI nr
Match: XP_038906378.1 (U1 small nuclear ribonucleoprotein A [Benincasa hispida]) HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124 Identity = 231/243 (95.06%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of MS019030 vs. NCBI nr
Match: XP_022948748.1 (U1 small nuclear ribonucleoprotein A-like [Cucurbita moschata] >XP_022997952.1 U1 small nuclear ribonucleoprotein A-like [Cucurbita maxima] >XP_023524504.1 U1 small nuclear ribonucleoprotein A [Cucurbita pepo subsp. pepo] >KAG7036660.1 U1 small nuclear ribonucleoprotein A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124 Identity = 231/243 (95.06%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of MS019030 vs. NCBI nr
Match: XP_008454331.1 (PREDICTED: U1 small nuclear ribonucleoprotein A [Cucumis melo] >TYK29512.1 U1 small nuclear ribonucleoprotein A [Cucumis melo var. makuwa]) HSP 1 Score: 454.1 bits (1167), Expect = 7.4e-124 Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of MS019030 vs. ExPASy Swiss-Prot
Match: Q39244 (U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana OX=3702 GN=U1A PE=1 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.3e-94 Identity = 182/241 (75.52%), Postives = 205/241 (85.06%), Query Frame = 0
BLAST of MS019030 vs. ExPASy Swiss-Prot
Match: A2Y0J7 (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18512 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.4e-88 Identity = 174/240 (72.50%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of MS019030 vs. ExPASy Swiss-Prot
Match: Q0DKM4 (U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0154800 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.4e-88 Identity = 174/240 (72.50%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of MS019030 vs. ExPASy Swiss-Prot
Match: O22922 (U2 small nuclear ribonucleoprotein B'' OS=Arabidopsis thaliana OX=3702 GN=U2B'' PE=1 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.6e-71 Identity = 139/234 (59.40%), Postives = 184/234 (78.63%), Query Frame = 0
BLAST of MS019030 vs. ExPASy Swiss-Prot
Match: Q8H1S6 (U2 small nuclear ribonucleoprotein B'' 2 OS=Arabidopsis thaliana OX=3702 GN=At1g06960 PE=1 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 137/234 (58.55%), Postives = 178/234 (76.07%), Query Frame = 0
BLAST of MS019030 vs. ExPASy TrEMBL
Match: A0A6J1DP02 (U1 small nuclear ribonucleoprotein A OS=Momordica charantia OX=3673 GN=LOC111022440 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128 Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0
BLAST of MS019030 vs. ExPASy TrEMBL
Match: A0A5A7TMM0 (U1 small nuclear ribonucleoprotein A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001120 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 5.0e-126 Identity = 232/243 (95.47%), Postives = 237/243 (97.53%), Query Frame = 0
BLAST of MS019030 vs. ExPASy TrEMBL
Match: A0A6J1K6I0 (U1 small nuclear ribonucleoprotein A-like OS=Cucurbita maxima OX=3661 GN=LOC111492748 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124 Identity = 231/243 (95.06%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of MS019030 vs. ExPASy TrEMBL
Match: A0A6J1GA71 (U1 small nuclear ribonucleoprotein A-like OS=Cucurbita moschata OX=3662 GN=LOC111452325 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124 Identity = 231/243 (95.06%), Postives = 238/243 (97.94%), Query Frame = 0
BLAST of MS019030 vs. ExPASy TrEMBL
Match: A0A5D3E0R3 (U1 small nuclear ribonucleoprotein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001140 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 3.6e-124 Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of MS019030 vs. TAIR 10
Match: AT2G47580.1 (spliceosomal protein U1A ) HSP 1 Score: 347.4 bits (890), Expect = 9.1e-96 Identity = 182/241 (75.52%), Postives = 205/241 (85.06%), Query Frame = 0
BLAST of MS019030 vs. TAIR 10
Match: AT2G30260.1 (U2 small nuclear ribonucleoprotein B ) HSP 1 Score: 270.0 bits (689), Expect = 1.8e-72 Identity = 139/234 (59.40%), Postives = 184/234 (78.63%), Query Frame = 0
BLAST of MS019030 vs. TAIR 10
Match: AT1G06960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70 Identity = 137/234 (58.55%), Postives = 178/234 (76.07%), Query Frame = 0
BLAST of MS019030 vs. TAIR 10
Match: AT1G06960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69 Identity = 137/234 (58.55%), Postives = 177/234 (75.64%), Query Frame = 0
BLAST of MS019030 vs. TAIR 10
Match: AT1G06960.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 228.0 bits (580), Expect = 8.0e-60 Identity = 116/202 (57.43%), Postives = 152/202 (75.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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