MS018947 (gene) Bitter gourd (TR) v1

Overview


Name	MS018947
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold20: 83564 .. 84217 (+)
RNA-Seq Expression	MS018947
Synteny	MS018947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCCTCAGGCAGCCCGTGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAATTCCCTGGTGACTATGGTTGGGATACCGCAGGTCTATCGGCTGATCCCGAAACCTTTGCTAAGAACCGGGAGCTCGAAGTGATTCATAGTAGATGGGCTATGCTTGGAGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAGGTCTTGTTCATGCACAAAGCATTTTGGCCATCTGGGCATGTCAAGTAGTGTTAATGGGTGCAGTTGAGGGTTACCGTATTGCCGGAGGACCACTCGGGGAAGTTACTGATCCCATTTATCCCGGGGGTAGCTTTGATCCCCTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTCAAGAACGGCCGACTTGCAATGTTTTCCATGTTCGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGACCCTGTCAACAACAATGCATGGGCTTATGCTACCAAC

mRNA sequence

GCTTCCTCAGGCAGCCCGTGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAATTCCCTGGTGACTATGGTTGGGATACCGCAGGTCTATCGGCTGATCCCGAAACCTTTGCTAAGAACCGGGAGCTCGAAGTGATTCATAGTAGATGGGCTATGCTTGGAGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAGGTCTTGTTCATGCACAAAGCATTTTGGCCATCTGGGCATGTCAAGTAGTGTTAATGGGTGCAGTTGAGGGTTACCGTATTGCCGGAGGACCACTCGGGGAAGTTACTGATCCCATTTATCCCGGGGGTAGCTTTGATCCCCTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTCAAGAACGGCCGACTTGCAATGTTTTCCATGTTCGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGACCCTGTCAACAACAATGCATGGGCTTATGCTACCAAC

Coding sequence (CDS)

GCTTCCTCAGGCAGCCCGTGGTATGGTCCCGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCTCCATCTTACCTCAAAGGGGAATTCCCTGGTGACTATGGTTGGGATACCGCAGGTCTATCGGCTGATCCCGAAACCTTTGCTAAGAACCGGGAGCTCGAAGTGATTCATAGTAGATGGGCTATGCTTGGAGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAGGTCTTGTTCATGCACAAAGCATTTTGGCCATCTGGGCATGTCAAGTAGTGTTAATGGGTGCAGTTGAGGGTTACCGTATTGCCGGAGGACCACTCGGGGAAGTTACTGATCCCATTTATCCCGGGGGTAGCTTTGATCCCCTCGGGCTGGCCGACGATCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAACTCAAGAACGGCCGACTTGCAATGTTTTCCATGTTCGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCTGACCCTGTCAACAACAATGCATGGGCTTATGCTACCAAC

Protein sequence

ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN

Homology

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BLAST of MS018947 vs. NCBI nr
Match: XP_022159070.1 (chlorophyll a-b binding protein of LHCII type 1 [Momordica charantia])

HSP 1 Score: 460.7 bits (1184), Expect = 7.1e-126
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 43  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA
Sbjct: 103 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 162

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
           CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF
Sbjct: 163 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 222

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

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BLAST of MS018947 vs. NCBI nr
Match: P08221.1 (RecName: Full=Chlorophyll a-b binding protein of LHCII type I, chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor [Cucumis sativus] >AAA33124.1 chlorophyll a/b-binding protein, partial [Cucumis sativus])

HSP 1 Score: 454.1 bits (1167), Expect = 6.6e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 34  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 93

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 94  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 153

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 154 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 213

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 214 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 250

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BLAST of MS018947 vs. NCBI nr
Match: XP_011658281.1 (chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus] >KGN49374.1 hypothetical protein Csa_003318 [Cucumis sativus])

HSP 1 Score: 454.1 bits (1167), Expect = 6.6e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. NCBI nr
Match: XP_004134608.2 (chlorophyll a-b binding protein of LHCII type 1 [Cucumis sativus] >KGN49375.1 hypothetical protein Csa_004082 [Cucumis sativus])

HSP 1 Score: 454.1 bits (1167), Expect = 6.6e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. NCBI nr
Match: XP_008439659.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0052561.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK13265.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 454.1 bits (1167), Expect = 6.6e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 8.7e-127
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 34  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 93

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 94  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 153

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 154 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 213

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 214 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 250

[Close]

BLAST of MS018947 vs. ExPASy Swiss-Prot
Match: P12329 (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays OX=4577 GN=CAB1 PE=1 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 7.4e-126
Identity = 211/218 (96.79%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           A+SGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 40  AASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 99

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP L+HAQSILAIWA
Sbjct: 100 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 159

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
           CQVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF
Sbjct: 160 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 219

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATN
Sbjct: 220 SMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATN 257

[Close]

BLAST of MS018947 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-124
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 42  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 101

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP L+HAQSILAIWA 
Sbjct: 102 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAT 161

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 162 QVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 221

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATN
Sbjct: 222 MFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATN 258

[Close]

BLAST of MS018947 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 5.3e-124
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           ASSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH 
Sbjct: 45  ASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 104

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWA
Sbjct: 105 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 164

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
           CQVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMF
Sbjct: 165 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 224

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATN
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 262

[Close]

BLAST of MS018947 vs. ExPASy Swiss-Prot
Match: P07371 (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=AB80 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-123
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           ASSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHS
Sbjct: 47  ASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHS 106

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWA
Sbjct: 107 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 166

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
            QV+LMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF
Sbjct: 167 TQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 226

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATN
Sbjct: 227 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATN 264

[Close]

BLAST of MS018947 vs. ExPASy TrEMBL
Match: A0A6J1DXL6 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025509 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.4e-126
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 43  ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA
Sbjct: 103 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 162

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
           CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF
Sbjct: 163 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 222

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. ExPASy TrEMBL
Match: A0A5D3CNU3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008830 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   ASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 60
           +SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 43  SSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102

Query: 61  RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWA 120
           RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWA
Sbjct: 103 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162

Query: 121 CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 180
           CQ+VLMGAVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF
Sbjct: 163 CQIVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 222

Query: 181 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. ExPASy TrEMBL
Match: A0A0A0KI21 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G522690 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. ExPASy TrEMBL
Match: A0A0A0KKK7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G522680 PE=3 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.2e-124
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 2   SSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 61
           SSGSPWYGPDRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 62  WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAC 121
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWAC
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 122 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 181
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 182 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 260

[Close]

BLAST of MS018947 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 424.5 bits (1090), Expect = 5.2e-119
Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 3   SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 62
           SGSPWYG DRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRW
Sbjct: 45  SGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 104

Query: 63  AMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQ 122
           AMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNP LVHAQSILAIWA Q
Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 164

Query: 123 VVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 182
           V+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFS
Sbjct: 165 VILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 224

Query: 183 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATN
Sbjct: 225 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 261

[Close]

BLAST of MS018947 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 424.5 bits (1090), Expect = 5.2e-119
Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 3   SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 62
           SGSPWYG DRVKYLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRW
Sbjct: 44  SGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 103

Query: 63  AMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQ 122
           AMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNP LVHAQSILAIWA Q
Sbjct: 104 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 163

Query: 123 VVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 182
           V+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFS
Sbjct: 164 VILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 223

Query: 183 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 260

[Close]

BLAST of MS018947 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-118
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 3   SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 62
           SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRW
Sbjct: 46  SGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 105

Query: 63  AMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQ 122
           AMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNP LVHAQSILAIWA Q
Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165

Query: 123 VVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 182
           V+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFS
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225

Query: 183 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATN 262

[Close]

BLAST of MS018947 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-118
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 3   SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 62
           SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRW
Sbjct: 46  SGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 105

Query: 63  AMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQ 122
           AMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNP LVHAQSILAIWA Q
Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165

Query: 123 VVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 182
           V+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFS
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225

Query: 183 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATN 262

[Close]

BLAST of MS018947 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-118
Identity = 199/217 (91.71%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 3   SGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 62
           SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRW
Sbjct: 46  SGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 105

Query: 63  AMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQ 122
           AMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNP LVHAQSILAIWA Q
Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165

Query: 123 VVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 182
           V+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFS
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225

Query: 183 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 219
           MFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATN 262

The following BLAST results are available for this feature:

BLAST of MS018947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159070.1	7.1e-126	100.00	chlorophyll a-b binding protein of LHCII type 1 [Momordica charantia]	[more]
P08221.1	6.6e-124	99.08	RecName: Full=Chlorophyll a-b binding protein of LHCII type I, chloroplastic; Sh...	[more]
XP_011658281.1	6.6e-124	99.08	chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus]...	[more]
XP_004134608.2	6.6e-124	99.08	chlorophyll a-b binding protein of LHCII type 1 [Cucumis sativus] >KGN49375.1 hy...	[more]
XP_008439659.2	6.6e-124	99.08	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]

BLAST of MS018947 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	8.7e-127	99.08	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P12329	7.4e-126	96.79	Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays OX=4577 GN=CAB1 PE=...	[more]
P09756	1.4e-124	97.24	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P07369	5.3e-124	95.87	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P07371	1.2e-123	95.87	Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum OX=3888 GN=...	[more]

BLAST of MS018947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXL6	3.4e-126	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3CNU3	3.2e-124	99.08	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1KEF6	3.2e-124	97.71	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KI21	3.2e-124	99.08	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A0A0KKK7	3.2e-124	99.08	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of MS018947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	5.2e-119	92.63	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	5.2e-119	92.63	photosystem II light harvesting complex gene B1B2	[more]
AT1G29910.1	7.6e-118	91.71	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	7.6e-118	91.71	chlorophyll A/B-binding protein 2	[more]
AT1G29930.1	7.6e-118	91.71	chlorophyll A/B binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 14..216 e-value: 2.6E-91 score: 307.0
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 23..189 e-value: 6.0E-50 score: 169.9
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..218
None	No IPR available	PANTHER	PTHR21649:SF128	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 2..218
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 6..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS018947.1	MS018947.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0016020	membrane