MS018895 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGATTACGCCATGAAATTTCAGAATAAGAAG ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGATTACGCCATGAAATTTCAGAATAAGAAG ATGGCACTCTCCAGAACTCGGTTGCAGCTGTCGCGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGATATCGACGGAGATGGTGTCCTCAGCATTAGTGAGCTCACCCAAGCCTTCAGTTTCTTAGGCAATCTTCTTCCATTCTACAAAGCTCACTATGGTCTCGCTTATGCTGATGCTGATGGCGATGGCTTCATCACTGAGGACGAGCTCGACAGGCTCGTCGATTACGCCATGAAATTTCAGAATAAGAAG MALSRTRLQLSREEMKEIFREHDIDGDGVLSISELTQAFSFLGNLLPFYKAHYGLAYADADGDGFITEDELDRLVDYAMKFQNKK Homology
BLAST of MS018895 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26 Identity = 58/84 (69.05%), Postives = 74/84 (88.10%), Query Frame = 0
BLAST of MS018895 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 3.2e-26 Identity = 58/85 (68.24%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of MS018895 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 3.2e-26 Identity = 57/85 (67.06%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of MS018895 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 3.0e-24 Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of MS018895 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima]) HSP 1 Score: 120.6 bits (301), Expect = 6.8e-24 Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of MS018895 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.3e-06 Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of MS018895 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05 Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of MS018895 vs. ExPASy Swiss-Prot
Match: Q9S744 (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 9.6e-05 Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of MS018895 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3) HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of MS018895 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 2.1e-04 Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of MS018895 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 57/85 (67.06%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of MS018895 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 58/85 (68.24%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of MS018895 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24 Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of MS018895 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-24 Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of MS018895 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-24 Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = 0
BLAST of MS018895 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 ) HSP 1 Score: 47.4 bits (111), Expect = 6.8e-06 Identity = 23/70 (32.86%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of MS018895 vs. TAIR 10
Match: AT5G17470.1 (EF hand calcium-binding protein family ) HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05 Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 0
BLAST of MS018895 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 43.9 bits (102), Expect = 7.5e-05 Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of MS018895 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 ) HSP 1 Score: 43.9 bits (102), Expect = 7.5e-05 Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of MS018895 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 ) HSP 1 Score: 43.9 bits (102), Expect = 7.5e-05 Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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