Homology
BLAST of MS018689 vs. NCBI nr
Match:
XP_022141422.1 (ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 821/824 (99.64%), Postives = 823/824 (99.88%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG
Sbjct: 1 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 60
Query: 62 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 121
TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ
Sbjct: 61 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 120
Query: 122 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 181
KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE
Sbjct: 121 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 180
Query: 182 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 241
YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKG+VAIQKMVVDLM
Sbjct: 181 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLM 240
Query: 242 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 301
ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Sbjct: 241 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 300
Query: 302 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 361
VGFGKTEVALRAIF VVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 301 VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 360
Query: 362 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 421
KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 361 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 420
Query: 422 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 481
IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 421 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 480
Query: 482 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 541
GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 481 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 540
Query: 542 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 601
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
Sbjct: 541 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 600
Query: 602 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 661
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 601 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 660
Query: 662 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 721
HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ
Sbjct: 661 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 720
Query: 722 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 781
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMN+KVFKLITDSMTSEVHQ
Sbjct: 721 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQ 780
Query: 782 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY
Sbjct: 781 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 824
BLAST of MS018689 vs. NCBI nr
Match:
XP_038907244.1 (ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 769/825 (93.21%), Postives = 799/825 (96.85%), Query Frame = 0
Query: 2 MALL-SPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVP 61
MALL SPAPDVS+ RPLVAF+LGSFP LFNRN T R PKR +S+TNV+YAEDV+VP
Sbjct: 1 MALLFSPAPDVSSSRPLVAFKLGSFPSLRGLFNRNSTFRHFPKRYVSITNVIYAEDVIVP 60
Query: 62 GTAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGL 121
G AKSARRREQIELERDSISILNER+RR+HGKRESSRT MD+EEADRYIQMVKEQQQRGL
Sbjct: 61 GIAKSARRREQIELERDSISILNERIRRFHGKRESSRTVMDSEEADRYIQMVKEQQQRGL 120
Query: 122 QKLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFI 181
QKLKGDRQR +SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFI
Sbjct: 121 QKLKGDRQRKDSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFI 180
Query: 182 EYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDL 241
EYADGMAKLPVKQASRMLYRYNLPNE KRPRTLSKLNDT+TWEKRKTKG+VAIQKMVVDL
Sbjct: 181 EYADGMAKLPVKQASRMLYRYNLPNENKRPRTLSKLNDTTTWEKRKTKGKVAIQKMVVDL 240
Query: 242 MELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG 301
MELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLT+RETPMDRLICG
Sbjct: 241 MELYLHRLKQRRSPYPKCSAMEEFSAQFPYEPTVDQKEAFRDVERDLTQRETPMDRLICG 300
Query: 302 DVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQ 361
DVGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFS FPDVQIGLLSRFQ
Sbjct: 301 DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSLFPDVQIGLLSRFQ 360
Query: 362 TKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKT 421
TKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+ LGLLVVDEEQRFGVKQKEKIASFKT
Sbjct: 361 TKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSKLGLLVVDEEQRFGVKQKEKIASFKT 420
Query: 422 SIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELE 481
SIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAI+YELE
Sbjct: 421 SIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIRYELE 480
Query: 482 RGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC 541
RGGQVFYVLPRIKGLEEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC
Sbjct: 481 RGGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC 540
Query: 542 TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL 601
TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++AL
Sbjct: 541 TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSEEAL 600
Query: 602 ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVD 661
ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKVD
Sbjct: 601 ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVD 660
Query: 662 EHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRR 721
EHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE AAETDIW LMQFTENLRR
Sbjct: 661 EHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAESAAETDIWTLMQFTENLRR 720
Query: 722 QHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVH 781
QHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVFKLI+DSMTSEVH
Sbjct: 721 QHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVH 780
Query: 782 QNCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
+NCLSFEEH IKAGLLLELP+EQLLNWIFECLVELHASLPALIKY
Sbjct: 781 RNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY 825
BLAST of MS018689 vs. NCBI nr
Match:
XP_023529599.1 (ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1508.0 bits (3903), Expect = 0.0e+00
Identity = 761/824 (92.35%), Postives = 796/824 (96.60%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
MALL P VS+ RPLVAFRLGSFP+ W LFNRNC LR C KRC+S+TNVVYAEDVMVPG
Sbjct: 1 MALLLPTAVVSSSRPLVAFRLGSFPKLWGLFNRNCNLRHCSKRCVSITNVVYAEDVMVPG 60
Query: 62 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 121
AKSARRREQIELE DSI++LNER+RR+H KRESS+TAM+AEEADRYIQMVKEQQQRGLQ
Sbjct: 61 AAKSARRREQIELEHDSITVLNERIRRFHVKRESSKTAMEAEEADRYIQMVKEQQQRGLQ 120
Query: 122 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 181
KLKG+RQ+ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIE
Sbjct: 121 KLKGNRQKKESDGYDYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPTEYVFIE 180
Query: 182 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 241
YADGMAKL VKQASRMLYRY+LPNE KRPRTLSKLNDT+TWEKRKTKG++AIQKMVVDLM
Sbjct: 181 YADGMAKLSVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLM 240
Query: 242 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 301
ELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Sbjct: 241 ELYLHRLKQRRPPYPKCSAMEEFAAQFSYTPTVDQKEAFRDVEKDLTERETPMDRLICGD 300
Query: 302 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 361
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 301 VGFGKTEVALRAIFYVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 360
Query: 362 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 421
K+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 361 KSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 420
Query: 422 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 481
IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELER
Sbjct: 421 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSAFSKEKVKSAIKYELER 480
Query: 482 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 541
GGQVFYV PRIKGLEEVKDFLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICT
Sbjct: 481 GGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICT 540
Query: 542 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 601
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Sbjct: 541 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALE 600
Query: 602 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 661
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 601 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVDE 660
Query: 662 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 721
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ
Sbjct: 661 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 720
Query: 722 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 781
HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVFKLI++SM SEVH+
Sbjct: 721 HGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCMETKMNKKVFKLISESMVSEVHR 780
Query: 782 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCL+FEEH IKAGLLLELP+EQLLNWIFECLVELHASLPALIKY
Sbjct: 781 NCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY 824
BLAST of MS018689 vs. NCBI nr
Match:
XP_008465367.1 (PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo])
HSP 1 Score: 1506.5 bits (3899), Expect = 0.0e+00
Identity = 759/824 (92.11%), Postives = 796/824 (96.60%), Query Frame = 0
Query: 4 LLSPAPDVSTFRPLVAFRLGSFPR--QWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 63
L SPAPDVS+ RPL+AF+L SFP W LFNRNCT R P RC+SVTNV YAEDV+VPG
Sbjct: 4 LFSPAPDVSSSRPLLAFKLRSFPTLWGWGLFNRNCTFRHFPNRCVSVTNVAYAEDVIVPG 63
Query: 64 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 123
TAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD+EEADRYIQMVKEQQQRGLQ
Sbjct: 64 TAKSARRRDQIELERDSISVLNERILRFHGKRDSSRTTMDSEEADRYIQMVKEQQQRGLQ 123
Query: 124 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 183
KLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIE
Sbjct: 124 KLKGDKQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVRIKFDVQKGSTEPTEYVFIE 183
Query: 184 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 243
YADGMAKLPVKQASRMLYRYNLPNE ++PRTLSKLNDT+TWEKRKTKG+VAIQKMVVDLM
Sbjct: 184 YADGMAKLPVKQASRMLYRYNLPNENRKPRTLSKLNDTTTWEKRKTKGKVAIQKMVVDLM 243
Query: 244 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 303
ELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Sbjct: 244 ELYLHRLKQRRSPYPKCSAMEEFSAQFPYEPTVDQKEAFRDVERDLTERETPMDRLICGD 303
Query: 304 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 304 VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
Query: 364 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 423
KAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 364 KAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 423
Query: 424 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 424 VDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
Query: 484 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
GGQ+FYVLPRIKGLEEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 484 GGQIFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
Query: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 603
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Sbjct: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDEALE 603
Query: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
RLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 604 RLAALEDCRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
Query: 664 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 723
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR
Sbjct: 664 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRH 723
Query: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 783
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVF+LI+DSMTSEVH+
Sbjct: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKVVCMETNMNKKVFQLISDSMTSEVHR 783
Query: 784 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCLSFEEH IKAGLLLELP+EQLLNW+FECLVELHASLPALIKY
Sbjct: 784 NCLSFEEHQIKAGLLLELPREQLLNWVFECLVELHASLPALIKY 827
BLAST of MS018689 vs. NCBI nr
Match:
XP_004150202.1 (ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus])
HSP 1 Score: 1506.1 bits (3898), Expect = 0.0e+00
Identity = 763/824 (92.60%), Postives = 796/824 (96.60%), Query Frame = 0
Query: 4 LLSPAPDVSTFRPLVAFRLGSFP--RQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 63
LLSPAPDVS+ P++ F+L SFP R W LFNRN T R P RC+S+TNVVYAEDV+VPG
Sbjct: 4 LLSPAPDVSSSPPVLPFKLCSFPTLRGWGLFNRNSTFRHFPNRCVSITNVVYAEDVIVPG 63
Query: 64 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 123
TAKS+RRR+QIELERDSIS+LNER+ R+HGKR+SSRTAMD+EEADRYIQMVKEQQQRGLQ
Sbjct: 64 TAKSSRRRDQIELERDSISLLNERILRFHGKRDSSRTAMDSEEADRYIQMVKEQQQRGLQ 123
Query: 124 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 183
KLKGDRQR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE IEYVFIE
Sbjct: 124 KLKGDRQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIE 183
Query: 184 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 243
YADGMAKLPVKQASRMLYRY+LPNE KRPRTLSKLNDT+TWEKRKTKG++AIQKMVVDLM
Sbjct: 184 YADGMAKLPVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLM 243
Query: 244 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 303
ELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVEKDLT RETPMDRLICGD
Sbjct: 244 ELYLHRLKQRRSPYPKCSAMEEFSAQFPYEPTVDQKEAFRDVEKDLTGRETPMDRLICGD 303
Query: 304 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 304 VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
Query: 364 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 423
KAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 364 KAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 423
Query: 424 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 424 VDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
Query: 484 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
GGQVFYVLPRIKGLEEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 484 GGQVFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
Query: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 603
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD ALE
Sbjct: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDDALE 603
Query: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
Query: 664 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 723
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR
Sbjct: 664 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRH 723
Query: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 783
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMET MNKKVFKLI+DSMTSEVH+
Sbjct: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETNMNKKVFKLISDSMTSEVHR 783
Query: 784 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCLSFEEH IKAGLLLELP+EQLLNWIFECLVELHAS PALIKY
Sbjct: 784 NCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASFPALIKY 827
BLAST of MS018689 vs. ExPASy Swiss-Prot
Match:
F4JFJ3 (ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02060 PE=2 SV=1)
HSP 1 Score: 1246.1 bits (3223), Expect = 0.0e+00
Identity = 652/828 (78.74%), Postives = 731/828 (88.29%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
M L P PD T PLV +L SFP RLF + LRR ++ S+ +V A +
Sbjct: 1 MMSLLPNPDPITV-PLV-LKLCSFPPPRRLF--SLRLRRFTRKSSSLLPLV-AVSSLSAT 60
Query: 62 TAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGL 121
AK R RE+ EL E DSIS+LNER+RR GKRE++R AMD+EEA++YI MVKEQQ+RGL
Sbjct: 61 AAKPTRWREKPELAESDSISLLNERIRRDLGKRETARPAMDSEEAEKYIHMVKEQQERGL 120
Query: 122 QKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEY 181
QKLKG RQ ++ G F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EY
Sbjct: 121 QKLKGIRQGTKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 180
Query: 182 VFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMV 241
VFIEYADGMAKLP+KQASR+LYRYNLPNETKRPRTLS+L+DTS WE+RKTKG+VAIQKMV
Sbjct: 181 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 240
Query: 242 VDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL 301
VDLMELYLHRL+Q+R PYPK M DFAAQFPY T DQK+AF DVEKDLTERETPMDRL
Sbjct: 241 VDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRL 300
Query: 302 ICGDVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLS 361
ICGDVGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLS
Sbjct: 301 ICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVGLLS 360
Query: 362 RFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIAS 421
RFQTKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLGLLVVDEEQRFGVKQKEKIAS
Sbjct: 361 RFQTKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIAS 420
Query: 422 FKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKY 481
FKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV AIK
Sbjct: 421 FKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIEAIKN 480
Query: 482 ELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKI 541
EL+RGGQVFYVLPRIKGLEEV DFLE +FPDI+IA+AHGKQYSKQLEETME FA G IKI
Sbjct: 481 ELDRGGQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKI 540
Query: 542 LICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD 601
LICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
Sbjct: 541 LICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD 600
Query: 602 QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLS 661
QALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLS
Sbjct: 601 QALERLSALEECRELGQGFQLAEKDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLS 660
Query: 662 KVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTEN 721
KV+E R+ SVPY VKID++I P LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTEN
Sbjct: 661 KVEELRIFSVPYDLVKIDININPRLPSEYVNYLENPMEIIHEAEKAAEKDMWSLMQFTEN 720
Query: 722 LRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTS 781
LRRQ+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVFKLITDSMT
Sbjct: 721 LRRQYGKEPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMSKKVFKLITDSMTC 780
Query: 782 EVHQNCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
+V+++ L +E I A LLLELP+EQLLNW+F+CL ELHASLPALIKY
Sbjct: 781 DVYRSSLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY 823
BLAST of MS018689 vs. ExPASy Swiss-Prot
Match:
Q55750 (Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=mfd PE=3 SV=1)
HSP 1 Score: 543.9 bits (1400), Expect = 3.2e-153
Identity = 306/674 (45.40%), Postives = 432/674 (64.09%), Query Frame = 0
Query: 138 KVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVKQASRM 197
+VD L GDYVVHK GIG+F +K D EY+ I+YADG+ ++P
Sbjct: 521 QVDINKLSPGDYVVHKSHGIGKF--LKLDALANR----EYLMIQYADGILRVPADSLD-S 580
Query: 198 LYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLMELYLHRLKQRRPPYPK 257
L R+ + RP L K+ WE K K R A++K+ VDL+ LY R KQ YP
Sbjct: 581 LSRFR--HTGTRPPELHKMGG-KVWEATKNKVRKAVKKLAVDLLNLYAKRAKQVGYAYPP 640
Query: 258 CSA-MEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFG 317
S ++ FPY+PT DQ +A DV++DL E + PMDRL+CGDVGFGKTEVA+RAIF
Sbjct: 641 DSPWQQELEDSFPYQPTPDQLKAVQDVKRDL-EGDRPMDRLVCGDVGFGKTEVAVRAIFK 700
Query: 318 VVSSG-KQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEG 377
V+SG KQ +LAPT VL +QH+ + +RF+ +P + IGLL+RF+T +EK++ L +K G
Sbjct: 701 AVTSGNKQVALLAPTTVLTQQHYHTLKERFAPYP-ITIGLLNRFRTASEKKEILAKLKSG 760
Query: 378 QLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRT 437
+LDI+VGT +LG V + +LGLLV+DEEQRFGV QKEKI + KT +DVLTL+ATPIPRT
Sbjct: 761 ELDIVVGTQQVLGTSVKFKDLGLLVIDEEQRFGVNQKEKIKTLKTEVDVLTLTATPIPRT 820
Query: 438 LYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGL 497
LY++L+G R+ SLITTPPP R PIKTHLS ++ E +++AI+ EL+RGGQVFYV+PRI+G+
Sbjct: 821 LYMSLSGIREMSLITTPPPSRRPIKTHLSPYNPEVIRTAIRNELDRGGQVFYVVPRIEGI 880
Query: 498 EEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANT 557
EE+ L P IA+ HG+ +LE TM F G+ IL+CT I+E+GLDI NT
Sbjct: 881 EELGGQLRQMVPSARIAIGHGQMEESELESTMLAFNDGEADILVCTTIIEAGLDIPRVNT 940
Query: 558 IIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQG 617
IIV+D Q+FGLAQLYQLRGRVGR+ +AHA+L YP++ L+++A RL AL+E +LG G
Sbjct: 941 IIVEDAQKFGLAQLYQLRGRVGRSGIQAHAWLLYPNQKQLTEKARLRLRALQEFSQLGSG 1000
Query: 618 FQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID 677
+QLA RDM IRG G + G +Q+G + +G + + EML D++ ++ + V + +ID
Sbjct: 1001 YQLATRDMEIRGVGNLLGAEQSGQMEAIGYEFYMEMLQDAIKEIQGQEIPKV--EDTQID 1060
Query: 678 VDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQHGKEPYSMEILLKK 737
+ + +PS+YI LE M TD L + + ++G P +E L K
Sbjct: 1061 LPLTAFIPSDYIPDLEEKMAAYRRITSIESTD--ELPKIALDWGDRYGMLPSPVEELFKV 1120
Query: 738 LYVRRMAADLGISRIYASGK-TVCMETKMNKKVFKLITDSMTSEVHQNCLSFEEHHIKAG 797
+ ++ +A LG SRI GK + +ET M + +KL+ +++ + + + + + G
Sbjct: 1121 VKLKHLAKSLGFSRIKVEGKQNLVLETPMEEPAWKLLAENLPNHLQSRFVYSAKKVVVRG 1178
Query: 798 LLLELPKEQLLNWI 809
L + P +Q+ N I
Sbjct: 1181 LGVLAPAKQMDNLI 1178
BLAST of MS018689 vs. ExPASy Swiss-Prot
Match:
Q49V12 (Transcription-repair-coupling factor OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=mfd PE=3 SV=1)
HSP 1 Score: 449.9 bits (1156), Expect = 6.2e-125
Identity = 247/617 (40.03%), Postives = 392/617 (63.53%), Query Frame = 0
Query: 144 LRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYN 203
L+ GDYVVH G+GR++G++ ++ G +Y+ ++Y +PV Q ++ +
Sbjct: 497 LKVGDYVVHVHHGVGRYLGVE-TLEVGGVHK-DYIKLQYKGTDQLFVPVDQMDQV--QKY 556
Query: 204 LPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLMELYLHRLKQRRPPY-PKCSAM 263
+ +E K P+ L+KL T W+K K K + +++ M +L+ELY R + P +
Sbjct: 557 VASEDKSPK-LNKLGGTE-WKKTKAKVQQSVEDMADELIELYKAREMSVGYKFGPDTAEQ 616
Query: 264 EDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFGVVSSG 323
DF FPYE T DQ ++ ++++D+ E E PMDRL+CGDVG+GKTEVA+RA F V G
Sbjct: 617 NDFEIDFPYELTPDQSKSIEEIKQDM-EIERPMDRLLCGDVGYGKTEVAVRAAFKAVMEG 676
Query: 324 KQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIV 383
KQ L PT +LA+QH+E + +R FP +++ L+SRF+T E ++ + +K G +DI+V
Sbjct: 677 KQVAFLVPTTILAQQHYETLIERMQDFP-IEVQLISRFRTTKEVKETKEGLKSGFVDIVV 736
Query: 384 GTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALT 443
GTH LLG + Y +LGLL+VDEEQRFGV+ KE+I S K ++DVLTL+ATPIPRTL++++
Sbjct: 737 GTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKSLKNNVDVLTLTATPIPRTLHMSML 796
Query: 444 GFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF 503
G RD S+I TPP R P++T++ + +K A++ EL R GQVFY+ +++ + E ++
Sbjct: 797 GVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQ 856
Query: 504 LEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDV 563
L+ PD I +AHG+ + LEETM +F + I++ T I+E+G+D+ NANT+I++D
Sbjct: 857 LQMLMPDANIGVAHGQMNERDLEETMLSFINHEYDIIVTTTIIETGVDVPNANTLIIEDA 916
Query: 564 QQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAER 623
+FGL+QLYQLRGRVGR+ + +AY +P +LS+ A +RL A++E ELG GF++A R
Sbjct: 917 DRFGLSQLYQLRGRVGRSSRIGYAYFLHPTNKVLSETAEDRLQAIKEFTELGSGFKIAMR 976
Query: 624 DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPH 683
D+ IRG G + G+QQ G + +VG DL+ +ML +++++ + ++I+++I +
Sbjct: 977 DLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKAEKQDAPEIEIELNIDAY 1036
Query: 684 LPSEYINYLENPMKIINGAEK-AAETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRR 743
LP+EYI ++ ++I K +ET LM + L + P +E LL+ + ++
Sbjct: 1037 LPAEYIPNEQSKIEIYKKLRKIESETQ---LMDVKDELIDRFNDYPIEVERLLEMMEIKV 1096
Query: 744 MAADLGISRIYASGKTV 758
A G++ I GK V
Sbjct: 1097 HALHAGVTLIKDVGKQV 1102
BLAST of MS018689 vs. ExPASy Swiss-Prot
Match:
Q4L3G0 (Transcription-repair-coupling factor OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=mfd PE=3 SV=1)
HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-123
Identity = 257/666 (38.59%), Postives = 413/666 (62.01%), Query Frame = 0
Query: 108 YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKF 167
Y+Q+V +++ K K R+R ++ K+ Y L GDYVVH G+GR++G++
Sbjct: 458 YMQLVVITERELFKTKQKKQRKRTKTLSNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVE- 517
Query: 168 DVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEK 227
++ G +Y+ ++Y +PV Q ++ + + +E K P+ L+KL S W+K
Sbjct: 518 TLEVGDVHR-DYIKLQYKGTDQLFVPVDQMDQV--QKYVASEDKSPK-LNKLGG-SEWKK 577
Query: 228 RKTKGRVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDV 287
K K + +++ + +L+ LY R Y + +A + F FPYE T DQ ++ ++
Sbjct: 578 TKAKVQQSVEDIADELIALYKEREMSVGYQYGEDTAEQSAFEMDFPYELTPDQAKSIDEI 637
Query: 288 EKDLTERETPMDRLICGDVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQ 347
+ D+ ERE PMDRL+CGDVG+GKTEVA+RA F V GKQ L PT +LA+QH+E + +
Sbjct: 638 KGDM-ERERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIE 697
Query: 348 RFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE 407
R FP VQI L+SRF++ E ++ + +K G +DI+VGTH LLG + Y +LGLL+VDE
Sbjct: 698 RMQDFP-VQIELISRFRSTKEVKETKEGLKSGYVDIVVGTHKLLGKDIHYKDLGLLIVDE 757
Query: 408 EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHL 467
EQRFGV+ KE+I + KT++DVLTL+ATPIPRTL++++ G RD S+I TPP R P++T++
Sbjct: 758 EQRFGVRHKERIKTMKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYV 817
Query: 468 SSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQL 527
+ +K A++ EL R GQVFY+ R++ + E ++ L+ PD IA+AHG+ + L
Sbjct: 818 LEQNSNFIKEALERELSRDGQVFYLYNRVQSIYEKREQLQMLMPDANIAVAHGQMTERDL 877
Query: 528 EETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA 587
EETM +F G+ IL+ T I+E+G+D+ NANT+I+++ +FGL+QLYQLRGRVGR+ +
Sbjct: 878 EETMLSFINGEFDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIG 937
Query: 588 HAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNV 647
+AY + +L++ A ERL A++E ELG GF++A RD+ IRG G + G+QQ G + +V
Sbjct: 938 YAYFLHSANKVLTETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSV 997
Query: 648 GIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA 707
G DL+ +ML +++++ + V++++++ +LP+EYI + ++I K
Sbjct: 998 GFDLYSQMLEEAVNEKRGIKEEEPDAPEVEMELNLDAYLPAEYIQNEQAKIEIYKKLRKV 1057
Query: 708 AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK--TVCMET 767
+ L + L + P +E LL+ + ++ A G++ I GK V + T
Sbjct: 1058 ETEE--QLFDIKDELIDRFNDYPVEVERLLEMVEIKIHALHAGVTLIKDKGKQIEVSLST 1113
BLAST of MS018689 vs. ExPASy Swiss-Prot
Match:
Q5HRQ2 (Transcription-repair-coupling factor OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=mfd PE=3 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-122
Identity = 251/654 (38.38%), Postives = 405/654 (61.93%), Query Frame = 0
Query: 108 YIQMVK-EQQQRGLQKLKGDRQRNESDGFNYKVDPY-TLRSGDYVVHKKVGIGRFVGIKF 167
Y+Q+V +++ + K R+R ++ K+ Y L GDY+VH G+GR++G++
Sbjct: 458 YMQLVVITERELFKTRQKKQRKRTKTISNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVE- 517
Query: 168 DVQKGSTEPIEYVFIEY-ADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEK 227
++ G T +Y+ ++Y +PV Q ++ + + +E K PR L+KL T W+K
Sbjct: 518 TLEVGDTHR-DYIKLQYKGTDQLFVPVDQMDQV--QKYVASEDKSPR-LNKLGGTE-WKK 577
Query: 228 RKTKGRVAIQKMVVDLMELYLHRLKQRRPPYPKCSAMED-FAAQFPYEPTVDQKEAFSDV 287
K K + +++ + +L++LY R Y + +A + F FPYE T DQ ++ ++
Sbjct: 578 TKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEI 637
Query: 288 EKDLTERETPMDRLICGDVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQ 347
+ D+ ER PMDRL+CGDVG+GKTEVA+RA F V GKQ L PT +LA+QH+E + +
Sbjct: 638 KGDM-ERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLE 697
Query: 348 RFSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDE 407
R FP V+I L+SRF+T E + + +K G +DI+VGTH LLG + Y +LGLL+VDE
Sbjct: 698 RMQDFP-VEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDE 757
Query: 408 EQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHL 467
EQRFGV+ KE+I + K ++DVLTL+ATPIPRTL++++ G RD S+I TPP R P++T++
Sbjct: 758 EQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYV 817
Query: 468 SSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQL 527
+ +K A++ EL R GQVFY+ +++ + E ++ L+ PD IA+AHG+ + L
Sbjct: 818 LEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQRLMPDANIAVAHGQMTERDL 877
Query: 528 EETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA 587
EETM +F + IL+ T I+E+G+D+ NANT+I+++ +FGL+QLYQLRGRVGR+ +
Sbjct: 878 EETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIG 937
Query: 588 HAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNV 647
+AY +P +L++ A ERL A++E ELG GF++A RD+ IRG G + G+QQ G + +V
Sbjct: 938 YAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSV 997
Query: 648 GIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKA 707
G DL+ +ML +++++ + S +++++ + +LP+EYI + ++I K
Sbjct: 998 GFDLYSQMLEEAVNEKRGIKEESPDAPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKV 1057
Query: 708 AETDIWALMQFTENLRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTV 758
+ L + L + P +E LL + ++ A G+ I GK++
Sbjct: 1058 ETEE--QLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSI 1101
BLAST of MS018689 vs. ExPASy TrEMBL
Match:
A0A6J1CJT5 (ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011831 PE=4 SV=1)
HSP 1 Score: 1613.2 bits (4176), Expect = 0.0e+00
Identity = 821/824 (99.64%), Postives = 823/824 (99.88%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG
Sbjct: 1 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 60
Query: 62 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 121
TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ
Sbjct: 61 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 120
Query: 122 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 181
KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE
Sbjct: 121 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 180
Query: 182 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 241
YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKG+VAIQKMVVDLM
Sbjct: 181 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGKVAIQKMVVDLM 240
Query: 242 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 301
ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Sbjct: 241 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 300
Query: 302 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 361
VGFGKTEVALRAIF VVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 301 VGFGKTEVALRAIFCVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 360
Query: 362 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 421
KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 361 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 420
Query: 422 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 481
IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 421 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 480
Query: 482 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 541
GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 481 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 540
Query: 542 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 601
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE
Sbjct: 541 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 600
Query: 602 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 661
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 601 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 660
Query: 662 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 721
HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ
Sbjct: 661 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 720
Query: 722 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 781
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMN+KVFKLITDSMTSEVHQ
Sbjct: 721 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNRKVFKLITDSMTSEVHQ 780
Query: 782 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY
Sbjct: 781 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 824
BLAST of MS018689 vs. ExPASy TrEMBL
Match:
A0A1S3CNQ6 (ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503000 PE=4 SV=1)
HSP 1 Score: 1506.5 bits (3899), Expect = 0.0e+00
Identity = 759/824 (92.11%), Postives = 796/824 (96.60%), Query Frame = 0
Query: 4 LLSPAPDVSTFRPLVAFRLGSFPR--QWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 63
L SPAPDVS+ RPL+AF+L SFP W LFNRNCT R P RC+SVTNV YAEDV+VPG
Sbjct: 4 LFSPAPDVSSSRPLLAFKLRSFPTLWGWGLFNRNCTFRHFPNRCVSVTNVAYAEDVIVPG 63
Query: 64 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 123
TAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD+EEADRYIQMVKEQQQRGLQ
Sbjct: 64 TAKSARRRDQIELERDSISVLNERILRFHGKRDSSRTTMDSEEADRYIQMVKEQQQRGLQ 123
Query: 124 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 183
KLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIE
Sbjct: 124 KLKGDKQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVRIKFDVQKGSTEPTEYVFIE 183
Query: 184 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 243
YADGMAKLPVKQASRMLYRYNLPNE ++PRTLSKLNDT+TWEKRKTKG+VAIQKMVVDLM
Sbjct: 184 YADGMAKLPVKQASRMLYRYNLPNENRKPRTLSKLNDTTTWEKRKTKGKVAIQKMVVDLM 243
Query: 244 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 303
ELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Sbjct: 244 ELYLHRLKQRRSPYPKCSAMEEFSAQFPYEPTVDQKEAFRDVERDLTERETPMDRLICGD 303
Query: 304 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 304 VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
Query: 364 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 423
KAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 364 KAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 423
Query: 424 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 424 VDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
Query: 484 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
GGQ+FYVLPRIKGLEEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 484 GGQIFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
Query: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 603
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Sbjct: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDEALE 603
Query: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
RLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 604 RLAALEDCRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
Query: 664 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 723
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR
Sbjct: 664 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRH 723
Query: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 783
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVF+LI+DSMTSEVH+
Sbjct: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKVVCMETNMNKKVFQLISDSMTSEVHR 783
Query: 784 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCLSFEEH IKAGLLLELP+EQLLNW+FECLVELHASLPALIKY
Sbjct: 784 NCLSFEEHQIKAGLLLELPREQLLNWVFECLVELHASLPALIKY 827
BLAST of MS018689 vs. ExPASy TrEMBL
Match:
A0A6J1GZL7 (ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458673 PE=4 SV=1)
HSP 1 Score: 1506.1 bits (3898), Expect = 0.0e+00
Identity = 761/824 (92.35%), Postives = 794/824 (96.36%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
MALL P DVS+ RPLVAFRLGSFP+ W LFNRNC LR KRC+S+TNVVYAEDVMVPG
Sbjct: 1 MALLLPTADVSSSRPLVAFRLGSFPKLWGLFNRNCNLRHFSKRCVSITNVVYAEDVMVPG 60
Query: 62 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 121
AKSARRREQIELE DSI++LNER+RR+H KRESS+TAMDAEEADRYIQMVKEQQQRGLQ
Sbjct: 61 AAKSARRREQIELEHDSITVLNERIRRFHVKRESSKTAMDAEEADRYIQMVKEQQQRGLQ 120
Query: 122 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 181
KLKG+RQ+ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIE
Sbjct: 121 KLKGNRQKKESDGYDYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPTEYVFIE 180
Query: 182 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 241
YADGMAKL VKQASRMLYRY+LPNE KRPRTLSKLNDT+TWEKRKTKG++AIQKMVVDLM
Sbjct: 181 YADGMAKLSVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLM 240
Query: 242 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 301
ELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Sbjct: 241 ELYLHRLKQRRPPYPKCSAMEEFAAQFSYTPTVDQKEAFRDVEKDLTERETPMDRLICGD 300
Query: 302 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 361
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVIT RFSSFPDVQIGLLSRFQT
Sbjct: 301 VGFGKTEVALRAIFYVVSAGKQAMVLAPTIVLAKQHFEVITHRFSSFPDVQIGLLSRFQT 360
Query: 362 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 421
K+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 361 KSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 420
Query: 422 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 481
IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKV SAIKYELER
Sbjct: 421 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVNSAIKYELER 480
Query: 482 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 541
GGQVFYV PRIKGLEEVKDFLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICT
Sbjct: 481 GGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFALGAIKILICT 540
Query: 542 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 601
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Sbjct: 541 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALE 600
Query: 602 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 661
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 601 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVDE 660
Query: 662 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 721
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ
Sbjct: 661 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 720
Query: 722 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 781
HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVFKLI++SM SEVH+
Sbjct: 721 HGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCMETKMNKKVFKLISESMVSEVHR 780
Query: 782 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCL+FEEH IKAGLLLELP+EQLLNWIFECLVELHASLPALIKY
Sbjct: 781 NCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY 824
BLAST of MS018689 vs. ExPASy TrEMBL
Match:
A0A6J1JT22 (ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487597 PE=4 SV=1)
HSP 1 Score: 1502.3 bits (3888), Expect = 0.0e+00
Identity = 759/824 (92.11%), Postives = 795/824 (96.48%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
MALL P DVS+ RPLVAFRLGSFP+ W LFNRNC LR C KR +S+TNVVYAEDVMV G
Sbjct: 1 MALLLPTADVSSSRPLVAFRLGSFPKLWGLFNRNCNLRHCSKRFVSITNVVYAEDVMVSG 60
Query: 62 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 121
TAKSARRREQIELERDSI++LNER+RR+H KRESS+TAMDA EADRYIQMVKEQQQRGLQ
Sbjct: 61 TAKSARRREQIELERDSITVLNERIRRFHVKRESSKTAMDAVEADRYIQMVKEQQQRGLQ 120
Query: 122 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 181
KLKG+R++ ESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIE
Sbjct: 121 KLKGNRKKKESDGYDYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPTEYVFIE 180
Query: 182 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 241
YADGMAKL VKQASRMLYRY+LPNE KRPRTLSKLNDT+TWEKRKTKG++AIQKMVVDLM
Sbjct: 181 YADGMAKLSVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLM 240
Query: 242 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 301
ELYLHRLKQRRPPYPKCSAME+FAAQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Sbjct: 241 ELYLHRLKQRRPPYPKCSAMEEFAAQFSYTPTVDQKEAFRDVEKDLTERETPMDRLICGD 300
Query: 302 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 361
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 301 VGFGKTEVALRAIFYVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 360
Query: 362 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 421
K+EK+KHL+MIKEGQL+I+VGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 361 KSEKDKHLEMIKEGQLNIVVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 420
Query: 422 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 481
IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELER
Sbjct: 421 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSAFSKEKVKSAIKYELER 480
Query: 482 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 541
GGQVFYV PRIKGLEEVKDFLEASFPDIEI LAHGKQYSKQLEETMENF+LG IKILICT
Sbjct: 481 GGQVFYVFPRIKGLEEVKDFLEASFPDIEIGLAHGKQYSKQLEETMENFSLGAIKILICT 540
Query: 542 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 601
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLSDQALE
Sbjct: 541 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKALLSDQALE 600
Query: 602 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 661
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 601 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQSGDVGNVGIDLFFEMLFDSLSKVDE 660
Query: 662 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 721
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRR
Sbjct: 661 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRH 720
Query: 722 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 781
HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVFKLI++SM SEVH+
Sbjct: 721 HGKEPYSMEILLKKLYVRRMAADLGIYRIYASGKTVCMETKMNKKVFKLISESMVSEVHR 780
Query: 782 NCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
NCL+FEEH IKAGLLLELP+EQLLNWIFECLVELHASLPALIKY
Sbjct: 781 NCLTFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKY 824
BLAST of MS018689 vs. ExPASy TrEMBL
Match:
A0A5A7VIC8 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00090 PE=4 SV=1)
HSP 1 Score: 1447.6 bits (3746), Expect = 0.0e+00
Identity = 731/793 (92.18%), Postives = 764/793 (96.34%), Query Frame = 0
Query: 4 LLSPAPDVSTFRPLVAFRLGSFPR--QWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 63
L SPAPDVS+ RPL+AF+L SFP W LFNRNCT R P RC+SVTNV YAEDV+VPG
Sbjct: 4 LFSPAPDVSSSRPLLAFKLRSFPTLWGWGLFNRNCTFRHFPNRCVSVTNVAYAEDVIVPG 63
Query: 64 TAKSARRREQIELERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQ 123
TAKSARRR+QIELERDSIS+LNER+ R+HGKR+SSRT MD+EEADRYIQMVKEQQQRGLQ
Sbjct: 64 TAKSARRRDQIELERDSISVLNERILRFHGKRDSSRTTMDSEEADRYIQMVKEQQQRGLQ 123
Query: 124 KLKGDRQRNESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIE 183
KLKGD+QR ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIE
Sbjct: 124 KLKGDKQRKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVRIKFDVQKGSTEPTEYVFIE 183
Query: 184 YADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDLM 243
YADGMAKLPVKQASRMLYRYNLPNE K+PRTLSKLNDT+TWEKRKTKG+VAIQKMVVDLM
Sbjct: 184 YADGMAKLPVKQASRMLYRYNLPNENKKPRTLSKLNDTTTWEKRKTKGKVAIQKMVVDLM 243
Query: 244 ELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD 303
ELYLHRLKQRR PYPKCSAME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Sbjct: 244 ELYLHRLKQRRSPYPKCSAMEEFSAQFPYEPTVDQKEAFRDVERDLTERETPMDRLICGD 303
Query: 304 VGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
VGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT
Sbjct: 304 VGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQT 363
Query: 364 KAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTS 423
KAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTS
Sbjct: 364 KAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTS 423
Query: 424 IDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER
Sbjct: 424 VDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELER 483
Query: 484 GGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
GGQ+FYVLPRIKGLEEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT
Sbjct: 484 GGQIFYVLPRIKGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICT 543
Query: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALE 603
NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLSD+ALE
Sbjct: 544 NIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDEALE 603
Query: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
Sbjct: 604 RLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE 663
Query: 664 HRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRRQ 723
HRVVSVPYQSVKID+DI PHLPSEYINYLENPMKI+NGAE+AAETDIW LMQFTENLRR
Sbjct: 664 HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILNGAERAAETDIWTLMQFTENLRRH 723
Query: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVHQ 783
HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVF+LI+DSMTSEVH+
Sbjct: 724 HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKVVCMETNMNKKVFQLISDSMTSEVHR 783
Query: 784 NCLSFEEHHIKAG 795
NCLSFEEH IK G
Sbjct: 784 NCLSFEEHQIKLG 796
BLAST of MS018689 vs. TAIR 10
Match:
AT3G02060.1 (DEAD/DEAH box helicase, putative )
HSP 1 Score: 1246.1 bits (3223), Expect = 0.0e+00
Identity = 652/828 (78.74%), Postives = 731/828 (88.29%), Query Frame = 0
Query: 2 MALLSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPG 61
M L P PD T PLV +L SFP RLF + LRR ++ S+ +V A +
Sbjct: 1 MMSLLPNPDPITV-PLV-LKLCSFPPPRRLF--SLRLRRFTRKSSSLLPLV-AVSSLSAT 60
Query: 62 TAKSARRREQIEL-ERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGL 121
AK R RE+ EL E DSIS+LNER+RR GKRE++R AMD+EEA++YI MVKEQQ+RGL
Sbjct: 61 AAKPTRWREKPELAESDSISLLNERIRRDLGKRETARPAMDSEEAEKYIHMVKEQQERGL 120
Query: 122 QKLKGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEY 181
QKLKG RQ ++ G F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EY
Sbjct: 121 QKLKGIRQGTKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 180
Query: 182 VFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMV 241
VFIEYADGMAKLP+KQASR+LYRYNLPNETKRPRTLS+L+DTS WE+RKTKG+VAIQKMV
Sbjct: 181 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 240
Query: 242 VDLMELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRL 301
VDLMELYLHRL+Q+R PYPK M DFAAQFPY T DQK+AF DVEKDLTERETPMDRL
Sbjct: 241 VDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRL 300
Query: 302 ICGDVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLS 361
ICGDVGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLS
Sbjct: 301 ICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVGLLS 360
Query: 362 RFQTKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIAS 421
RFQTKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLGLLVVDEEQRFGVKQKEKIAS
Sbjct: 361 RFQTKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIAS 420
Query: 422 FKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKY 481
FKTS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV AIK
Sbjct: 421 FKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIEAIKN 480
Query: 482 ELERGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKI 541
EL+RGGQVFYVLPRIKGLEEV DFLE +FPDI+IA+AHGKQYSKQLEETME FA G IKI
Sbjct: 481 ELDRGGQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKI 540
Query: 542 LICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD 601
LICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD
Sbjct: 541 LICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD 600
Query: 602 QALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLS 661
QALERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLS
Sbjct: 601 QALERLSALEECRELGQGFQLAEKDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLS 660
Query: 662 KVDEHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTEN 721
KV+E R+ SVPY VKID++I P LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTEN
Sbjct: 661 KVEELRIFSVPYDLVKIDININPRLPSEYVNYLENPMEIIHEAEKAAEKDMWSLMQFTEN 720
Query: 722 LRRQHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTS 781
LRRQ+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVFKLITDSMT
Sbjct: 721 LRRQYGKEPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMSKKVFKLITDSMTC 780
Query: 782 EVHQNCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
+V+++ L +E I A LLLELP+EQLLNW+F+CL ELHASLPALIKY
Sbjct: 781 DVYRSSLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY 823
BLAST of MS018689 vs. TAIR 10
Match:
AT3G02060.2 (DEAD/DEAH box helicase, putative )
HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 651/825 (78.91%), Postives = 730/825 (88.48%), Query Frame = 0
Query: 5 LSPAPDVSTFRPLVAFRLGSFPRQWRLFNRNCTLRRCPKRCISVTNVVYAEDVMVPGTAK 64
L P PD T PLV +L SFP RLF + LRR ++ S+ +V A + AK
Sbjct: 3 LLPNPDPITV-PLV-LKLCSFPPPRRLF--SLRLRRFTRKSSSLLPLV-AVSSLSATAAK 62
Query: 65 SARRREQIEL-ERDSISILNERVRRYHGKRESSRTAMDAEEADRYIQMVKEQQQRGLQKL 124
R RE+ EL E DSIS+LNER+RR GKRE++R AMD+EEA++YI MVKEQQ+RGLQKL
Sbjct: 63 PTRWREKPELAESDSISLLNERIRRDLGKRETARPAMDSEEAEKYIHMVKEQQERGLQKL 122
Query: 125 KGDRQRNESDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFI 184
KG RQ ++ G F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFI
Sbjct: 123 KGIRQGTKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFI 182
Query: 185 EYADGMAKLPVKQASRMLYRYNLPNETKRPRTLSKLNDTSTWEKRKTKGRVAIQKMVVDL 244
EYADGMAKLP+KQASR+LYRYNLPNETKRPRTLS+L+DTS WE+RKTKG+VAIQKMVVDL
Sbjct: 183 EYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDL 242
Query: 245 MELYLHRLKQRRPPYPKCSAMEDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG 304
MELYLHRL+Q+R PYPK M DFAAQFPY T DQK+AF DVEKDLTERETPMDRLICG
Sbjct: 243 MELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICG 302
Query: 305 DVGFGKTEVALRAIFGVVSSGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQ 364
DVGFGKTEVALRAIF VVS+GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQ
Sbjct: 303 DVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVGLLSRFQ 362
Query: 365 TKAEKEKHLDMIKEGQLDIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIASFKT 424
TKAEKE++L+MIK G L+IIVGTHSLLG RVVY+NLGLLVVDEEQRFGVKQKEKIASFKT
Sbjct: 363 TKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKT 422
Query: 425 SIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELE 484
S+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV AIK EL+
Sbjct: 423 SVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIEAIKNELD 482
Query: 485 RGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC 544
RGGQVFYVLPRIKGLEEV DFLE +FPDI+IA+AHGKQYSKQLEETME FA G IKILIC
Sbjct: 483 RGGQVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKILIC 542
Query: 545 TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL 604
TNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL
Sbjct: 543 TNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL 602
Query: 605 ERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVD 664
ERL+ALEECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+
Sbjct: 603 ERLSALEECRELGQGFQLAEKDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVE 662
Query: 665 EHRVVSVPYQSVKIDVDIKPHLPSEYINYLENPMKIINGAEKAAETDIWALMQFTENLRR 724
E R+ SVPY VKID++I P LPSEY+NYLENPM+II+ AEKAAE D+W+LMQFTENLRR
Sbjct: 663 ELRIFSVPYDLVKIDININPRLPSEYVNYLENPMEIIHEAEKAAEKDMWSLMQFTENLRR 722
Query: 725 QHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFKLITDSMTSEVH 784
Q+GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVFKLITDSMT +V+
Sbjct: 723 QYGKEPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMSKKVFKLITDSMTCDVY 782
Query: 785 QNCLSFEEHHIKAGLLLELPKEQLLNWIFECLVELHASLPALIKY 826
++ L +E I A LLLELP+EQLLNW+F+CL ELHASLPALIKY
Sbjct: 783 RSSLIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY 822
BLAST of MS018689 vs. TAIR 10
Match:
AT2G01440.1 (DEAD/DEAH box RNA helicase family protein )
HSP 1 Score: 216.5 bits (550), Expect = 8.2e-56
Identity = 145/416 (34.86%), Postives = 218/416 (52.40%), Query Frame = 0
Query: 262 EDFAAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFGVVSSG 321
+ F PY T Q A S++ DL +R PM+RL+ GDVG GKT VA A V+ SG
Sbjct: 512 KSFLKALPYSLTPSQLSAVSEIIWDL-KRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSG 571
Query: 322 KQAMVLAPTIVLAKQHFEVITQRFSSFPDVQ----IGLLSRFQTKAEKEKHLDMIKEGQL 381
QA +APT +LA QH+E + V IGLL+ + ++ G +
Sbjct: 572 YQAAFMAPTELLAIQHYEQCRDLLENMEGVSSKPTIGLLTGSTPAKQSRMIRQDLQSGAI 631
Query: 382 DIIVGTHSLLGDRVVYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSI------------- 441
I+GTHSL+ +++ Y+ L + VVDE+QRFGV Q+ K S + TS+
Sbjct: 632 SFIIGTHSLIAEKIEYSALRIAVVDEQQRFGVIQRGKFNSKLYGTSMISKSGSSDSDDTS 691
Query: 442 --------DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK-- 501
VL +SATPIPR+L LAL G + IT P R+P++TH+ ++ +K
Sbjct: 692 KADLSMAPHVLAMSATPIPRSLALALYGDISLTQITGMPLGRIPVETHIFEGNETGIKEV 751
Query: 502 -SAIKYELERGGQVFYVLPRIKGLEEVKDFLEAS---------FPDIEIALAHGKQYSKQ 561
S + +L+ GG+V+ V P I E++ AS FP L HG+ S
Sbjct: 752 YSMMLEDLKSGGRVYVVYPVIDQSEQLPQLRAASAELEIVTKKFPKYNCGLLHGRMKSDD 811
Query: 562 LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKE 621
EE + F G+ +IL+ T ++E G+D+ +A+ ++V + ++FG+AQL+QLRGRVGR ++
Sbjct: 812 KEEALNKFRSGETQILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTRK 871
Query: 622 AHAYLFYPDKSLLSDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTG 639
+ K LL + L L + GF LA D+ +RG G + G++Q+G
Sbjct: 872 S--------KCLLVGSSTNSLKRLNMLGKSSDGFYLANIDLLLRGPGDLLGKKQSG 918
BLAST of MS018689 vs. TAIR 10
Match:
AT5G26742.1 (DEAD box RNA helicase (RH3) )
HSP 1 Score: 54.3 bits (129), Expect = 5.4e-07
Identity = 77/302 (25.50%), Postives = 124/302 (41.06%), Query Frame = 0
Query: 325 MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVG 384
+VLAPT LAKQ + I + + S V G+ Q A + G +D++VG
Sbjct: 184 LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSA--------LTRG-VDVVVG 243
Query: 385 THSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIASFKTSID------------- 444
T + D + +L L LV+DE +Q V +E + S ++
Sbjct: 244 TPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMP 303
Query: 445 --VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELE 504
V L+ + L + L G +D L E + + +S SK + S +
Sbjct: 304 TWVKKLARKYLDNPLNIDLVGDQDEKL-----AEGIKLYAIATTSTSKRTILSDLITVYA 363
Query: 505 RGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC 564
+GG+ + +EV L S I HG Q E T+ F G +L+
Sbjct: 364 KGGKTIVFTQTKRDADEVSLALSNS---IATEALHGDISQHQRERTLNAFRQGKFTVLVA 423
Query: 565 TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL 603
T++ GLDI N + +I ++ +++ GR GRA KE A L + + ++L
Sbjct: 424 TDVASRGLDIPNVDLVIHYELPNDPETFVHR-SGRTGRAGKEGSAILMHTSSQKRTVRSL 467
BLAST of MS018689 vs. TAIR 10
Match:
AT5G26742.2 (DEAD box RNA helicase (RH3) )
HSP 1 Score: 54.3 bits (129), Expect = 5.4e-07
Identity = 77/302 (25.50%), Postives = 124/302 (41.06%), Query Frame = 0
Query: 325 MVLAPTIVLAKQHFEVITQR--FSSFPDVQIGLLSRFQTKAEKEKHLDMIKEGQLDIIVG 384
+VLAPT LAKQ + I + + S V G+ Q A + G +D++VG
Sbjct: 184 LVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSA--------LTRG-VDVVVG 243
Query: 385 THSLLGDRVVYNNLGL-----LVVDE-EQRFGVKQKEKIASFKTSID------------- 444
T + D + +L L LV+DE +Q V +E + S ++
Sbjct: 244 TPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMP 303
Query: 445 --VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELE 504
V L+ + L + L G +D L E + + +S SK + S +
Sbjct: 304 TWVKKLARKYLDNPLNIDLVGDQDEKL-----AEGIKLYAIATTSTSKRTILSDLITVYA 363
Query: 505 RGGQVFYVLPRIKGLEEVKDFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILIC 564
+GG+ + +EV L S I HG Q E T+ F G +L+
Sbjct: 364 KGGKTIVFTQTKRDADEVSLALSNS---IATEALHGDISQHQRERTLNAFRQGKFTVLVA 423
Query: 565 TNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQAL 603
T++ GLDI N + +I ++ +++ GR GRA KE A L + + ++L
Sbjct: 424 TDVASRGLDIPNVDLVIHYELPNDPETFVHR-SGRTGRAGKEGSAILMHTSSQKRTVRSL 467
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141422.1 | 0.0e+00 | 99.64 | ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Momordica charan... | [more] |
XP_038907244.1 | 0.0e+00 | 93.21 | ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispid... | [more] |
XP_023529599.1 | 0.0e+00 | 92.35 | ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
XP_008465367.1 | 0.0e+00 | 92.11 | PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo] | [more] |
XP_004150202.1 | 0.0e+00 | 92.60 | ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
F4JFJ3 | 0.0e+00 | 78.74 | ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q55750 | 3.2e-153 | 45.40 | Transcription-repair-coupling factor OS=Synechocystis sp. (strain PCC 6803 / Kaz... | [more] |
Q49V12 | 6.2e-125 | 40.03 | Transcription-repair-coupling factor OS=Staphylococcus saprophyticus subsp. sapr... | [more] |
Q4L3G0 | 2.6e-123 | 38.59 | Transcription-repair-coupling factor OS=Staphylococcus haemolyticus (strain JCSC... | [more] |
Q5HRQ2 | 2.2e-122 | 38.38 | Transcription-repair-coupling factor OS=Staphylococcus epidermidis (strain ATCC ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CJT5 | 0.0e+00 | 99.64 | ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 OS=Momordica char... | [more] |
A0A1S3CNQ6 | 0.0e+00 | 92.11 | ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucumis melo OX=3656 GN=L... | [more] |
A0A6J1GZL7 | 0.0e+00 | 92.35 | ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucurbita moschata OX=366... | [more] |
A0A6J1JT22 | 0.0e+00 | 92.11 | ATP-dependent DNA helicase At3g02060, chloroplastic OS=Cucurbita maxima OX=3661 ... | [more] |
A0A5A7VIC8 | 0.0e+00 | 92.18 | ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |