MS018458 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCACGCTTCCTTCCATGGCCAAAACCAAACCTCAACTTCTCTGCTGCTTCGGATTTTCCGGTAAGCTTCGCCGCTCCAAGCCCCTCAAACCCGCCGCCGCCCACACAAAACGTCCGTTTTCTTGGATGCGGTTTCACGCCAAGCCGCCGGTTCGATCAGCTCTCCTGGCCGACCGGTCCAATCCGGACTCCGACCGGCTCACACCGGGACCTATAGCTTCGACCACCGTTTACAAGCCGCCGAGTGAAGATCTGGCCGCCGTGGAACCGCCGGCGATTAATCAAGCAGGCGAGGGGAGGCCGGAAAAGGTATGCAAATTTGATCATTGCCTATAATTTTCCAACTAAATTGTCGAATAGAGGAAGAGCGAAAAAAAAAAAAAAAAAAAATTAAAGGTGTGTTTGGGAATAATCACTCATCTCTGTTTTGGAAAATTAATTATACTTAATCATAAATTCTACAGCACCCCTAACCACATTCTAGATGTAATTTATTTACTTGATATTATTAAGAAAGTATACAATCACTTTAAATAAATTTTTAAAATAGGGATGATTTTAGAAAATTAATTATACTTAATTTTTTTAATCACAAATTCTACGATACTCCTAATTAAACACACTCTAAATGTAGTGTATTTACTTGATATTGGTTTCCACTTGATGAGAAATTTTATTATCTTGTTAGAGATATATTCTTTTATATATGTATATATGTGTGTGTTATTTCTAGATTTTTTATTTTATTTTATTTTTTTTGAAAGAATCTATTTCCATCCATTTCAGGTAGGAAATGAGGACGTTGTAGAAGAAATCATCCTTGAAACTCGTGAACATTCAGACACGCCAAAGAAACCTGACGGTGAAAGTCAAACAAGGTTCTCACTAACCTGGAGACTCGAGTCATTTCGATCCGGCCGATTCACTAAACTTGTATCACCGACCGCAAGGAAGGATCCAATAACTACAAATCCGGTCCCCGCCATATCGAAATCTCTATCATTCCCTGCATTGAACCCAACCCGTAGAGTTCAAGTTGAAAGTCCCCCAACAAGCATGCGGGTCGGGTTGGACGGCGATGAGATGAGCAAAAAGTATCGATCAGCGGCCGCCATTTCGATTTTTATAGTCACATTATCAATTATGATATTGTGGGGAAGAATGTGCGCCATTTTATCTACGGCTGCGTGGATTCTCATTGTTGCAAGCTTAGAGTCGATTGTAGAAGAAGATGATGAGAATGATTTTATTGGATCAGATTCGTATTCTGAAGGGCTTAAGAAAAAATTAGTGATTCTAAAAGGGTTTCTCTATAGAAGTCAGCGAGAGAATATGCTAAAAAAAGCA CCCACGCTTCCTTCCATGGCCAAAACCAAACCTCAACTTCTCTGCTGCTTCGGATTTTCCGGTAAGCTTCGCCGCTCCAAGCCCCTCAAACCCGCCGCCGCCCACACAAAACGTCCGTTTTCTTGGATGCGGTTTCACGCCAAGCCGCCGGTTCGATCAGCTCTCCTGGCCGACCGGTCCAATCCGGACTCCGACCGGCTCACACCGGGACCTATAGCTTCGACCACCGTTTACAAGCCGCCGAGTGAAGATCTGGCCGCCGTGGAACCGCCGGCGATTAATCAAGCAGGCGAGGGGAGGCCGGAAAAGGTAGGAAATGAGGACGTTGTAGAAGAAATCATCCTTGAAACTCGTGAACATTCAGACACGCCAAAGAAACCTGACGGTGAAAGTCAAACAAGGTTCTCACTAACCTGGAGACTCGAGTCATTTCGATCCGGCCGATTCACTAAACTTGTATCACCGACCGCAAGGAAGGATCCAATAACTACAAATCCGGTCCCCGCCATATCGAAATCTCTATCATTCCCTGCATTGAACCCAACCCGTAGAGTTCAAGTTGAAAGTCCCCCAACAAGCATGCGGGTCGGGTTGGACGGCGATGAGATGAGCAAAAAGTATCGATCAGCGGCCGCCATTTCGATTTTTATAGTCACATTATCAATTATGATATTGTGGGGAAGAATGTGCGCCATTTTATCTACGGCTGCGTGGATTCTCATTGTTGCAAGCTTAGAGTCGATTGTAGAAGAAGATGATGAGAATGATTTTATTGGATCAGATTCGTATTCTGAAGGGCTTAAGAAAAAATTAGTGATTCTAAAAGGGTTTCTCTATAGAAGTCAGCGAGAGAATATGCTAAAAAAAGCA CCCACGCTTCCTTCCATGGCCAAAACCAAACCTCAACTTCTCTGCTGCTTCGGATTTTCCGGTAAGCTTCGCCGCTCCAAGCCCCTCAAACCCGCCGCCGCCCACACAAAACGTCCGTTTTCTTGGATGCGGTTTCACGCCAAGCCGCCGGTTCGATCAGCTCTCCTGGCCGACCGGTCCAATCCGGACTCCGACCGGCTCACACCGGGACCTATAGCTTCGACCACCGTTTACAAGCCGCCGAGTGAAGATCTGGCCGCCGTGGAACCGCCGGCGATTAATCAAGCAGGCGAGGGGAGGCCGGAAAAGGTAGGAAATGAGGACGTTGTAGAAGAAATCATCCTTGAAACTCGTGAACATTCAGACACGCCAAAGAAACCTGACGGTGAAAGTCAAACAAGGTTCTCACTAACCTGGAGACTCGAGTCATTTCGATCCGGCCGATTCACTAAACTTGTATCACCGACCGCAAGGAAGGATCCAATAACTACAAATCCGGTCCCCGCCATATCGAAATCTCTATCATTCCCTGCATTGAACCCAACCCGTAGAGTTCAAGTTGAAAGTCCCCCAACAAGCATGCGGGTCGGGTTGGACGGCGATGAGATGAGCAAAAAGTATCGATCAGCGGCCGCCATTTCGATTTTTATAGTCACATTATCAATTATGATATTGTGGGGAAGAATGTGCGCCATTTTATCTACGGCTGCGTGGATTCTCATTGTTGCAAGCTTAGAGTCGATTGTAGAAGAAGATGATGAGAATGATTTTATTGGATCAGATTCGTATTCTGAAGGGCTTAAGAAAAAATTAGTGATTCTAAAAGGGTTTCTCTATAGAAGTCAGCGAGAGAATATGCTAAAAAAAGCA PTLPSMAKTKPQLLCCFGFSGKLRRSKPLKPAAAHTKRPFSWMRFHAKPPVRSALLADRSNPDSDRLTPGPIASTTVYKPPSEDLAAVEPPAINQAGEGRPEKVGNEDVVEEIILETREHSDTPKKPDGESQTRFSLTWRLESFRSGRFTKLVSPTARKDPITTNPVPAISKSLSFPALNPTRRVQVESPPTSMRVGLDGDEMSKKYRSAAAISIFIVTLSIMILWGRMCAILSTAAWILIVASLESIVEEDDENDFIGSDSYSEGLKKKLVILKGFLYRSQRENMLKKA Homology
BLAST of MS018458 vs. NCBI nr
Match: XP_022152887.1 (uncharacterized protein LOC111020508 [Momordica charantia]) HSP 1 Score: 532.3 bits (1370), Expect = 2.5e-147 Identity = 276/285 (96.84%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of MS018458 vs. NCBI nr
Match: XP_038897219.1 (uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida]) HSP 1 Score: 256.9 bits (655), Expect = 2.1e-64 Identity = 159/296 (53.72%), Postives = 201/296 (67.91%), Query Frame = 0
BLAST of MS018458 vs. NCBI nr
Match: XP_023549176.1 (uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.1 bits (645), Expect = 3.0e-63 Identity = 152/293 (51.88%), Postives = 193/293 (65.87%), Query Frame = 0
BLAST of MS018458 vs. NCBI nr
Match: XP_022991489.1 (uncharacterized protein LOC111488090 [Cucurbita maxima]) HSP 1 Score: 243.4 bits (620), Expect = 2.4e-60 Identity = 148/292 (50.68%), Postives = 191/292 (65.41%), Query Frame = 0
BLAST of MS018458 vs. NCBI nr
Match: XP_022954035.1 (uncharacterized protein LOC111456417 [Cucurbita moschata]) HSP 1 Score: 243.0 bits (619), Expect = 3.1e-60 Identity = 148/295 (50.17%), Postives = 191/295 (64.75%), Query Frame = 0
BLAST of MS018458 vs. ExPASy Swiss-Prot
Match: Q9FMY4 (Uncharacterized protein At5g23160 OS=Arabidopsis thaliana OX=3702 GN=At5g23160 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04 Identity = 41/130 (31.54%), Postives = 57/130 (43.85%), Query Frame = 0
BLAST of MS018458 vs. ExPASy TrEMBL
Match: A0A6J1DHG8 (uncharacterized protein LOC111020508 OS=Momordica charantia OX=3673 GN=LOC111020508 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147 Identity = 276/285 (96.84%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of MS018458 vs. ExPASy TrEMBL
Match: A0A6J1JV00 (uncharacterized protein LOC111488090 OS=Cucurbita maxima OX=3661 GN=LOC111488090 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60 Identity = 148/292 (50.68%), Postives = 191/292 (65.41%), Query Frame = 0
BLAST of MS018458 vs. ExPASy TrEMBL
Match: A0A6J1GRB9 (uncharacterized protein LOC111456417 OS=Cucurbita moschata OX=3662 GN=LOC111456417 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60 Identity = 148/295 (50.17%), Postives = 191/295 (64.75%), Query Frame = 0
BLAST of MS018458 vs. ExPASy TrEMBL
Match: A0A1S3CFR9 (uncharacterized protein At5g23160 OS=Cucumis melo OX=3656 GN=LOC103499966 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54 Identity = 140/289 (48.44%), Postives = 180/289 (62.28%), Query Frame = 0
BLAST of MS018458 vs. ExPASy TrEMBL
Match: A0A0A0K6H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420760 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51 Identity = 138/289 (47.75%), Postives = 176/289 (60.90%), Query Frame = 0
BLAST of MS018458 vs. TAIR 10
Match: AT5G08240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06 Identity = 42/131 (32.06%), Postives = 61/131 (46.56%), Query Frame = 0
BLAST of MS018458 vs. TAIR 10
Match: AT5G23160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05 Identity = 41/130 (31.54%), Postives = 57/130 (43.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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