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MS017994 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTCGAGAACACTGATTTCCTCTGTAAGTTTCCGCCCTTCATCCCTTGATCTTAATTTCACCGTTTTTCGTTCGTTATTGTGTAATTTTTCCGTTTCCCCGATCTTTTTATGGATGTTTGTGTTGGATTGTTGAAGATCGCAAAGATTCTGATCCTGATTCTGTTTCTGATTATATGTCTGATAACTGAGAAAGTGATGAAAAAGAAACTCGATCAGAATGTTGAGTGTTTGATTTGATCATTGGTATATTGGAATAGTGACGGCCCTGAAATTGATCTGCATGTGAAGTTCTAAATTTAGTGAGATGCATTTTAGAAGGTCAACTTTGTAAATAACGAGACAACAGGAGTCGTTTTAGGGGAATTCGTATTGGTATTGCCTTTTTGTTTTCATATATTATTTGTGTTGCTGTGGTGGATAATGGATATTCCCCTGAACTGATCTGATTCCCCAATTTTTGTGTTAGAGGGGACATCATTGCCAGATGTTTGTGAAGCTTTTATTTGCAAAAATTAATCTCGGGAAAATGGATTTTCATAAAGTTTTTATTTTCCCCTGTTCATAAAATTGATGAACTATTTGTGATTTGAGAAATTCATTTGGTGATAGATTGGAGAGGAAAACTAATATTAATTATTGATGTCTAATTTTTAATGATATTCTTAACTTATCGTTACCTTAATTTATGAAATTCTAAAATCAATTAAAATATCTTTTCAACTAATTTTTTTTAAATTCAAAAAATTATATTGGATAAAAGACTTTATAAAATGTACCTAAAAGACCTTGCACCTTTTATCTAATAATTTAAAGGTGTGTATAAATCTTTGGAAGGGATGAAATGCGTTTCCATTGTTCACCATCCTTTTAACCTCATACTTATTAATAATGCCACAAGTTTGTTTCCCAATTTTTTTTCTCTTCTTCTTTTTTTTAGTGGGTGGGAAATCAAATCTTCAACCTCAAGAAAAGAAAAGTAACGAGTGTCTTATCCAACTATCGTTGGCATCAAAAAATAGAGTCGATTTTTTTTTTTTTATAATTTCAAGGGAAATCTTGTTTAACAAGTTCTCAATGGATTTGGGCAGGTAACATGGATCCTTATGTTATTCTTAGTTGCCGCTCACAGGAGCAGAAAAGCAGTATTGCATCAGGTTTTTGGCTTTATACATCTTCAACATAATCCTGAAAATCCCCACCATCTCCAACTTTTCAGAATTTGGGAGTGTTTTGACACTCGAAATGTGTTTTGATAACATACAGGAAAGGGATCTGACCCTGAATGGAATGAGAATTTCGTATTCACCATTTCTGATGGTGCAGAAGAGCTCATCTTGAAGATATTTGACAGTGATACTGGCTCGCAAGATGATGTTGTCGGCGAAGTAACGTAAGTAAAATGCCTCTTAATTGTTGCCCATAATCAAAGCATGGATTCAGTTGATCTTTTGTCGTATACTAATATTGAGGAAAAAAAATGTAATATGGATATATGCATAGCCTTCGACAAAAAAATGGATAACCAAGCAAGGTTTGTTTCATAGAATCATAAACTTGGATTTAGTTTTCTCGGGTTAGGATTTTTGAGCTTCATATGAATGGTTGTGAACCGTGATCTCGTCACATCAACCCAGTACGGTCTTTCTAAACATCAAAGCAAGAAAATATCCTAGATCATGTGGTTTATTTTGTTCTATGCCTGTTCAATTTTTGCTACTTTATTGCAGCATTCCTCTAGATCCTGTTTACGTCGAAGGAAGCCTCCCGGCAACAGCATACAACGTTGTCAAGGATCAAGAATATCGTGGAGAGATCAAAGTTGGCCTTACTTTTAATCGTGAGGTCAGTCTCATTCTTTACTTCATTTCATTGTTGCAAGATTATCAAATAAGATCATGACTTTGGCTCATGTTTCGGGGTATCACAAGGATTTACTATGTTAATCATGCAAGTAACCCTTTGATCCTCTACCTGCAGGAGAGAACTACAAGAAGCTTTCATATGGACGAAGAATCTCTTGGTGGATGGAAGCAGTCTGCATATACAGAT ATGCCTGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTCGAGAACACTGATTTCCTCTGTAACATGGATCCTTATGTTATTCTTAGTTGCCGCTCACAGGAGCAGAAAAGCAGTATTGCATCAGGAAAGGGATCTGACCCTGAATGGAATGAGAATTTCGTATTCACCATTTCTGATGGTGCAGAAGAGCTCATCTTGAAGATATTTGACAGTGATACTGGCTCGCAAGATGATGTTGTCGGCGAAGTAACCATTCCTCTAGATCCTGTTTACGTCGAAGGAAGCCTCCCGGCAACAGCATACAACGTTGTCAAGGATCAAGAATATCGTGGAGAGATCAAAGTTGGCCTTACTTTTAATCGTGAGGAGAGAACTACAAGAAGCTTTCATATGGACGAAGAATCTCTTGGTGGATGGAAGCAGTCTGCATATACAGAT ATGCCTGCCGGAACTCTTGAAGTTCTTCTTGTTTCCGCCAAGGGCCTCGAGAACACTGATTTCCTCTGTAACATGGATCCTTATGTTATTCTTAGTTGCCGCTCACAGGAGCAGAAAAGCAGTATTGCATCAGGAAAGGGATCTGACCCTGAATGGAATGAGAATTTCGTATTCACCATTTCTGATGGTGCAGAAGAGCTCATCTTGAAGATATTTGACAGTGATACTGGCTCGCAAGATGATGTTGTCGGCGAAGTAACCATTCCTCTAGATCCTGTTTACGTCGAAGGAAGCCTCCCGGCAACAGCATACAACGTTGTCAAGGATCAAGAATATCGTGGAGAGATCAAAGTTGGCCTTACTTTTAATCGTGAGGAGAGAACTACAAGAAGCTTTCATATGGACGAAGAATCTCTTGGTGGATGGAAGCAGTCTGCATATACAGAT MPAGTLEVLLVSAKGLENTDFLCNMDPYVILSCRSQEQKSSIASGKGSDPEWNENFVFTISDGAEELILKIFDSDTGSQDDVVGEVTIPLDPVYVEGSLPATAYNVVKDQEYRGEIKVGLTFNREERTTRSFHMDEESLGGWKQSAYTD Homology
BLAST of MS017994 vs. NCBI nr
Match: XP_022159864.1 (elicitor-responsive protein 3 [Momordica charantia]) HSP 1 Score: 301.6 bits (771), Expect = 3.8e-78 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MS017994 vs. NCBI nr
Match: XP_008437230.1 (PREDICTED: elicitor-responsive protein 3 [Cucumis melo] >KAA0042784.1 elicitor-responsive protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62 Identity = 116/149 (77.85%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS017994 vs. NCBI nr
Match: KAF3969662.1 (hypothetical protein CMV_006566 [Castanea mollissima]) HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61 Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 0
BLAST of MS017994 vs. NCBI nr
Match: XP_038875372.1 (elicitor-responsive protein 3 [Benincasa hispida] >XP_038875373.1 elicitor-responsive protein 3 [Benincasa hispida]) HSP 1 Score: 245.0 bits (624), Expect = 4.2e-61 Identity = 117/143 (81.82%), Postives = 130/143 (90.91%), Query Frame = 0
BLAST of MS017994 vs. NCBI nr
Match: XP_004143927.1 (elicitor-responsive protein 3 [Cucumis sativus] >KGN50129.1 hypothetical protein Csa_000227 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61 Identity = 118/149 (79.19%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of MS017994 vs. ExPASy Swiss-Prot
Match: Q25AG5 (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.3e-53 Identity = 98/146 (67.12%), Postives = 118/146 (80.82%), Query Frame = 0
BLAST of MS017994 vs. ExPASy Swiss-Prot
Match: Q0JBH9 (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.3e-53 Identity = 98/146 (67.12%), Postives = 118/146 (80.82%), Query Frame = 0
BLAST of MS017994 vs. ExPASy Swiss-Prot
Match: Q9C8S6 (16 kDa phloem protein 2 OS=Arabidopsis thaliana OX=3702 GN=PP16-2 PE=1 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 6.9e-51 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of MS017994 vs. ExPASy Swiss-Prot
Match: A2WWV5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20 Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 0
BLAST of MS017994 vs. ExPASy Swiss-Prot
Match: Q0JHU5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20 Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 0
BLAST of MS017994 vs. ExPASy TrEMBL
Match: A0A6J1E3J1 (elicitor-responsive protein 3 OS=Momordica charantia OX=3673 GN=LOC111026153 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MS017994 vs. ExPASy TrEMBL
Match: A0A5A7THG8 (Elicitor-responsive protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002870 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62 Identity = 116/149 (77.85%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS017994 vs. ExPASy TrEMBL
Match: A0A1S3ATI0 (elicitor-responsive protein 3 OS=Cucumis melo OX=3656 GN=LOC103482722 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62 Identity = 116/149 (77.85%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MS017994 vs. ExPASy TrEMBL
Match: A0A0A0KMM6 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G154910 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61 Identity = 118/149 (79.19%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of MS017994 vs. ExPASy TrEMBL
Match: A0A7N2N5G7 (C2 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.5e-61 Identity = 116/149 (77.85%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of MS017994 vs. TAIR 10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 201.4 bits (511), Expect = 4.9e-52 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of MS017994 vs. TAIR 10
Match: AT1G63220.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 169.9 bits (429), Expect = 1.6e-42 Identity = 86/145 (59.31%), Postives = 103/145 (71.03%), Query Frame = 0
BLAST of MS017994 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20 Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 0
BLAST of MS017994 vs. TAIR 10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19 Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0
BLAST of MS017994 vs. TAIR 10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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