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MS017989 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACGTTGCGTTAGCTCGAGTCGAGTGGGAGAAGAAGTTGGCCTTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAAGCAGAGAACAAGTAAGACAGAGGAATCTCTCTCTCCATGTTTTGAAGGCTATTTTATTTTTTTGAGCTCATGTTTGAAATCTTTGGAACAGGGCATACAAAAGGCTCTCTGCCATTGACTCTTGGGAGGACGGCAAAAAAGCCTCCATAGAAGCACAGCTGATGAAGATAGAGGTACATTTGCTTTTGGCTGAAGTACATTGGCCCTGGTTTTTCGATATGAGTTTTGAAGTGTTTGGTTTTTGTGGGAATGAAGGAGAAAATGGAGAAGAAGAAAGCGGAGTATGTCGAAGAAATGAAGAACAAAATTGTTGGAATTCACAAGCAAGGCGAAGAGAAGAAAGCAGCCATTGAGGCAGAGCGAAGAGAGCAATATCTCAAGGTCGAGGAGACCGCTGCAAAATACCGTTCTTCGGGGTTCACCCCGAAGAATCTACTACTCAAATGCTTCAGTGGTTGAGAAGCTGGGGGTGAAAAAAGTAAAATATAGAACTCCCATCTCCGATTTGCACTCTAGTTTTAGTATTTGGCTTGGTTTTGTTTTGAGTTTTTGGCAGGAGATGACCTTCAAGGGATTTTTTTTTTTTTTTTTTTAT GACGTTGCGTTAGCTCGAGTCGAGTGGGAGAAGAAGTTGGCCTTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAAGCAGAGAACAAGGCATACAAAAGGCTCTCTGCCATTGACTCTTGGGAGGACGGCAAAAAAGCCTCCATAGAAGCACAGCTGATGAAGATAGAGGAGAAAATGGAGAAGAAGAAAGCGGAGTATGTCGAAGAAATGAAGAACAAAATTGTTGGAATTCACAAGCAAGGCGAAGAGAAGCAGCCATTGAGGCAGAGCGAAGAGAGCAATATCTCAAGGTCGAGGAGACCGCTGCAAAATACCGTTCTTCGGGGTTCACCCCGAAGAATCTACTACTCAAATGCTTCAGTGGTTGAGAAGCTGGGGGTGAAAAAAGTAAAATATAGAACTCCCATCTCCGATTTGCACTCTAGTTTTAGTATTTGGCTTGGTTTTGTTTTGAGTTTTTGGCAGGAGATGACCTTCAAGGGATTTTTTTTTTTTTTTTTTTAT GACGTTGCGTTAGCTCGAGTCGAGTGGGAGAAGAAGTTGGCCTTGATCAAAGCATGGGAGGAGAGTGAGAAGATCAAAGCAGAGAACAAGGCATACAAAAGGCTCTCTGCCATTGACTCTTGGGAGGACGGCAAAAAAGCCTCCATAGAAGCACAGCTGATGAAGATAGAGGAGAAAATGGAGAAGAAGAAAGCGGAGTATGTCGAAGAAATGAAGAACAAAATTGTTGGAATTCACAAGCAAGGCGAAGAGAAGCAGCCATTGAGGCAGAGCGAAGAGAGCAATATCTCAAGGTCGAGGAGACCGCTGCAAAATACCGTTCTTCGGGGTTCACCCCGAAGAATCTACTACTCAAATGCTTCAGTGGTTGAGAAGCTGGGGGTGAAAAAAGTAAAATATAGAACTCCCATCTCCGATTTGCACTCTAGTTTTAGTATTTGGCTTGGTTTTGTTTTGAGTTTTTGGCAGGAGATGACCTTCAAGGGATTTTTTTTTTTTTTTTTTTAT DVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDGKKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKQPLRQSEESNISRSRRPLQNTVLRGSPRRIYYSNASVVEKLGVKKVKYRTPISDLHSSFSIWLGFVLSFWQEMTFKGFFFFFFY Homology
BLAST of MS017989 vs. NCBI nr
Match: KGN50121.1 (hypothetical protein Csa_000115 [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 1.6e-40 Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of MS017989 vs. NCBI nr
Match: XP_022159796.1 (remorin-like isoform X2 [Momordica charantia]) HSP 1 Score: 158.7 bits (400), Expect = 4.5e-35 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of MS017989 vs. NCBI nr
Match: XP_022159795.1 (remorin-like isoform X1 [Momordica charantia]) HSP 1 Score: 158.7 bits (400), Expect = 4.5e-35 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of MS017989 vs. NCBI nr
Match: XP_038876135.1 (remorin 1.4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31 Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of MS017989 vs. NCBI nr
Match: XP_038876138.1 (remorin 1.4-like isoform X3 [Benincasa hispida]) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31 Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of MS017989 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 8.2e-24 Identity = 58/92 (63.04%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of MS017989 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.6e-22 Identity = 56/92 (60.87%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of MS017989 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21 Identity = 55/93 (59.14%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of MS017989 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20 Identity = 51/92 (55.43%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS017989 vs. ExPASy TrEMBL
Match: A0A0A0KQX6 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G154830 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 7.7e-41 Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of MS017989 vs. ExPASy TrEMBL
Match: A0A6J1E511 (remorin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of MS017989 vs. ExPASy TrEMBL
Match: A0A6J1DZS7 (remorin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of MS017989 vs. ExPASy TrEMBL
Match: A0A5A7TJ21 (Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002790 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31 Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of MS017989 vs. ExPASy TrEMBL
Match: A0A1S3AU31 (uncharacterized protein At3g61260 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31 Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of MS017989 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 111.7 bits (278), Expect = 5.8e-25 Identity = 58/92 (63.04%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of MS017989 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 111.7 bits (278), Expect = 5.8e-25 Identity = 58/92 (63.04%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of MS017989 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22 Identity = 55/93 (59.14%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of MS017989 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22 Identity = 51/92 (55.43%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of MS017989 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 101.3 bits (251), Expect = 7.9e-22 Identity = 51/92 (55.43%), Postives = 74/92 (80.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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