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MS017975 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTACGTGAAGCCCTTGAACTTGTTCCGTGATTTATTGACGAGAAATCCCCTCGAACGTGGGCGTTTTCTCGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCAGTCTCCGACCCAGATAATTTAATTGCCTCACCTCTTAGGTATTTTGTTTTTCTGTTTTTGGGATTATGTCAGAGATTAGCAGTAATGGGATTGAAGTTGAAGTTAAAAGAATGTGATGAGTATTATTTTTTGTTCGTTGCTGCAGTGTTTTGCTCAGGAAGAAAACAAAGATGCATTTGATGGCTCGGGATTTGCAGAGATTAGTGAGATTCTTTACTCTATTTCTTTGACCCTTCCTATGAAGATTTGTAGAATGTTGTTTGATAGTGTTAAATGATATATGATGATTGGCGTAAGATACTAAAACCTTAGGAAGTTTGAATGGTTGTGCCACAAATTTATATTGGGAGAACTTTAATTTGCTCAATTTGCTGCGAGTACCTTTCTACGTCCAAATGAGATTTCTAACTTTACCTTTTATTTTTTTCCTCTCTTTTTTCTGCGACGTGTTGCTGTGCTGCTCTTCTTCCAGCTAATAGCTTCACTATCGTGGGTGCCGTATATTTTTCTTTAATCTTTGATGTATGATAGTGAATTGTCAATGTTATTCTTTCTTGCAACCTTCAGTCATTTTCGCGCTGTGTATGGTTACGGCTGCTTCTGGTCCGTGTATGCAGATTTCTGAACTTTCTCTGGCGGGGTTCATTGTTGGGTACCCTTTTGATAGACAACGACGCAACGCGGATGTGTGTTCTTTATCTCTTTAAAATGGTCATTATTGACTCTCATCTCTACCCGACGTTATAATTATTCTGTGTGTATAGGCTGTGCAAGTGAAGATCTTCATTGATGACCTTTGTAAAACTGGAACACTTGAAGGCGTCAAATATACGTTTTGGGACGAGTGCTTTACATCAAAGGTTAGTGCATCTTGTTGTCAAGGTATTATTTTGGCAAGCCCTTCCTATTAGACGAACACTTTTAGAAATTTTTGGTAATCGAAAAGTAATATGAGATAAAAAAGTGTTTGAAAAAGTATCCTAGACTCATCCTAAGTCAAATAAGTGTGATCAATTTTTGAATGCTCTATCACCTGTCTAAATATGTCTAAATATTACTTTACATTGTATCTAAGAAGCATGGATAAGTACACGAGACACAGATATGGCACGATACGGACACAGTGACACGCTATTTTTTAAAAATCAAATACACGGACATGACAATGACATGTTTATTCAAATGTACAATTTTATTAAGTACATCAAGAAGGAAATTTAAAGTCAATAAATTTATGCATTTTTATGCTAAAAAGAATGATTTTGATGTATTTTGCTCTCAAAATTTGTTATTTTTTCTTATATTACTATTTATGTCTATTTATTATGCTTAACAAGTGTTCAATACGTGCCTAACAAGTATCGGATTCATATTCCTTTGTACAACTAGTGTGTGACACATTTTGAGTATACGTATTTGTGAACAGGACGAATTGCATTTCATTCAACATTGAATATTAAATCTGTGACTTCGTATCTCTATGCACAGAACGTGGAACTACTGATAAAGCCATTGGAACTGCCACCCGTTTTGTCGAAGACAATAGTTGACAAGTTTGCTGCTGTTGGAATACTTCAGGTAACTTTCAATCATCTTCTTCTCTGCGATTTAAGTTTTCGATTATCTTTGATAAGGTTGGCTGGTAAAATGAATCCAGTTTTCTCAATGCTAGAATTGCATCTTAAATTATCAATTAAAGCTTCAAGTTGATTAACGAAAAGGTGGTTTATGTCAGGGTTACCTAGATTATTATAACAGAAGACCAGAATTG ATGAAGTACGTGAAGCCCTTGAACTTGTTCCGTGATTTATTGACGAGAAATCCCCTCGAACGTGGGCGTTTTCTCGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCAGTCTCCGACCCAGATAATTTAATTGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAAGATGCATTTGATGGCTCGGGATTTGCAGAGATTAATTTCTGAACTTTCTCTGGCGGGGTTCATTGTTGGGTACCCTTTTGATAGACAACGACGCAACGCGGATGCTGTGCAAGTGAAGATCTTCATTGATGACCTTTGTAAAACTGGAACACTTGAAGGCGTCAAATATACGTTTTGGGACGAGTGCTTTACATCAAAGAACGTGGAACTACTGATAAAGCCATTGGAACTGCCACCCGTTTTGTCGAAGACAATAGTTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGTTACCTAGATTATTATAACAGAAGACCAGAATTG ATGAAGTACGTGAAGCCCTTGAACTTGTTCCGTGATTTATTGACGAGAAATCCCCTCGAACGTGGGCGTTTTCTCGGTTTAGATGTTGGTGATAAGTATGTTGGTTTGGCAGTCTCCGACCCAGATAATTTAATTGCCTCACCTCTTAGTGTTTTGCTCAGGAAGAAAACAAAGATGCATTTGATGGCTCGGGATTTGCAGAGATTAATTTCTGAACTTTCTCTGGCGGGGTTCATTGTTGGGTACCCTTTTGATAGACAACGACGCAACGCGGATGCTGTGCAAGTGAAGATCTTCATTGATGACCTTTGTAAAACTGGAACACTTGAAGGCGTCAAATATACGTTTTGGGACGAGTGCTTTACATCAAAGAACGTGGAACTACTGATAAAGCCATTGGAACTGCCACCCGTTTTGTCGAAGACAATAGTTGACAAGTTTGCTGCTGTTGGAATACTTCAGGGTTACCTAGATTATTATAACAGAAGACCAGAATTG MKYVKPLNLFRDLLTRNPLERGRFLGLDVGDKYVGLAVSDPDNLIASPLSVLLRKKTKMHLMARDLQRLISELSLAGFIVGYPFDRQRRNADAVQVKIFIDDLCKTGTLEGVKYTFWDECFTSKNVELLIKPLELPPVLSKTIVDKFAAVGILQGYLDYYNRRPEL Homology
BLAST of MS017975 vs. NCBI nr
Match: XP_022159849.1 (uncharacterized protein LOC111026145 [Momordica charantia] >XP_022159850.1 uncharacterized protein LOC111026145 [Momordica charantia] >XP_022159851.1 uncharacterized protein LOC111026145 [Momordica charantia]) HSP 1 Score: 335.5 bits (859), Expect = 2.6e-88 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MS017975 vs. NCBI nr
Match: XP_022957830.1 (uncharacterized protein LOC111459253 [Cucurbita moschata] >XP_022957831.1 uncharacterized protein LOC111459253 [Cucurbita moschata] >XP_022957832.1 uncharacterized protein LOC111459253 [Cucurbita moschata]) HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79 Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of MS017975 vs. NCBI nr
Match: XP_022995255.1 (uncharacterized protein LOC111490857 [Cucurbita maxima] >XP_022995256.1 uncharacterized protein LOC111490857 [Cucurbita maxima]) HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79 Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of MS017975 vs. NCBI nr
Match: XP_023533829.1 (uncharacterized protein LOC111795559 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 304.7 bits (779), Expect = 4.9e-79 Identity = 148/166 (89.16%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of MS017975 vs. NCBI nr
Match: XP_038875331.1 (putative pre-16S rRNA nuclease isoform X1 [Benincasa hispida] >XP_038875332.1 putative pre-16S rRNA nuclease isoform X1 [Benincasa hispida]) HSP 1 Score: 294.3 bits (752), Expect = 6.7e-76 Identity = 143/166 (86.14%), Postives = 152/166 (91.57%), Query Frame = 0
BLAST of MS017975 vs. ExPASy Swiss-Prot
Match: B9MRK7 (Putative pre-16S rRNA nuclease OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=Athe_1211 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.2e-15 Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 0
BLAST of MS017975 vs. ExPASy Swiss-Prot
Match: A4XKC6 (Putative pre-16S rRNA nuclease OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=Csac_1776 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13 Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of MS017975 vs. ExPASy Swiss-Prot
Match: Q3AEN4 (Putative pre-16S rRNA nuclease OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=CHY_0542 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13 Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 0
BLAST of MS017975 vs. ExPASy Swiss-Prot
Match: C4Z578 (Putative pre-16S rRNA nuclease OS=Lachnospira eligens (strain ATCC 27750 / DSM 3376 / VPI C15-48 / C15-B4) OX=515620 GN=EUBELI_00774 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.4e-13 Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of MS017975 vs. ExPASy Swiss-Prot
Match: B6IN25 (Putative pre-16S rRNA nuclease OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=RC1_1518 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.4e-13 Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 0
BLAST of MS017975 vs. ExPASy TrEMBL
Match: A0A6J1E3H7 (uncharacterized protein LOC111026145 OS=Momordica charantia OX=3673 GN=LOC111026145 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.3e-88 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of MS017975 vs. ExPASy TrEMBL
Match: A0A6J1K3L4 (uncharacterized protein LOC111490857 OS=Cucurbita maxima OX=3661 GN=LOC111490857 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 4.8e-80 Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of MS017975 vs. ExPASy TrEMBL
Match: A0A6J1H0B7 (uncharacterized protein LOC111459253 OS=Cucurbita moschata OX=3662 GN=LOC111459253 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 4.8e-80 Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of MS017975 vs. ExPASy TrEMBL
Match: A0A0A0KMK7 (YqgFc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G153680 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 5.7e-73 Identity = 138/166 (83.13%), Postives = 147/166 (88.55%), Query Frame = 0
BLAST of MS017975 vs. ExPASy TrEMBL
Match: A0A1S3ATQ4 (putative pre-16S rRNA nuclease isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482742 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.9e-69 Identity = 133/166 (80.12%), Postives = 144/166 (86.75%), Query Frame = 0
BLAST of MS017975 vs. TAIR 10
Match: AT3G52905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 194.5 bits (493), Expect = 6.7e-50 Identity = 96/162 (59.26%), Postives = 118/162 (72.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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