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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TTATTGGAAATGGCTTTCCATAAGAAGCACTTAATCATTTTGGTAATTTCCTTGTATCTCATGCTTTTTCTTTCGACCCATGGGGCAGCAAGGATCTTGAACAATCCAGATCATGGTTCCAAGGCCCCCACCACATTGTTTCGATGGAGAGGTGGACCTAATCCTGATAAGTCACATGGAGGTAATTACGGTCCTTGGTCCGCC mRNA sequence TTATTGGAAATGGCTTTCCATAAGAAGCACTTAATCATTTTGGTAATTTCCTTGTATCTCATGCTTTTTCTTTCGACCCATGGGGCAGCAAGGATCTTGAACAATCCAGATCATGGTTCCAAGGCCCCCACCACATTGTTTCGATGGAGAGGTGGACCTAATCCTGATAAGTCACATGGAGGTAATTACGGTCCTTGGTCCGCC Coding sequence (CDS) TTATTGGAAATGGCTTTCCATAAGAAGCACTTAATCATTTTGGTAATTTCCTTGTATCTCATGCTTTTTCTTTCGACCCATGGGGCAGCAAGGATCTTGAACAATCCAGATCATGGTTCCAAGGCCCCCACCACATTGTTTCGATGGAGAGGTGGACCTAATCCTGATAAGTCACATGGAGGTAATTACGGTCCTTGGTCCGCC Protein sequence LLEMAFHKKHLIILVISLYLMLFLSTHGAARILNNPDHGSKAPTTLFRWRGGPNPDKSHGGNYGPWSA
Homology
BLAST of MS017924 vs. NCBI nr
Match: KGN50358.1 (hypothetical protein Csa_000417 [Cucumis sativus]) HSP 1 Score: 53.9 bits (128), Expect = 6.2e-04 Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 0 Query: 3 EMAFHKKHLIILVISLYLMLFLSTHGAARILN-NPDHGSKAPTTLFRWRGGPNPDKSHGG 62 +MA +KKHLIIL LYLMLFLST+GAARIL+ N + + R D +HGG Sbjct: 3 KMASYKKHLIILATLLYLMLFLSTYGAARILDLNGSMKVREIKVIVVGRRIVRRDLAHGG 62
Query: 63 NYGP 66 NYGP Sbjct: 63 NYGP 66
BLAST of MS017924 vs. ExPASy TrEMBL
Match: A0A0A0KL54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168950 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-04 Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 0 Query: 3 EMAFHKKHLIILVISLYLMLFLSTHGAARILN-NPDHGSKAPTTLFRWRGGPNPDKSHGG 62 +MA +KKHLIIL LYLMLFLST+GAARIL+ N + + R D +HGG Sbjct: 3 KMASYKKHLIILATLLYLMLFLSTYGAARILDLNGSMKVREIKVIVVGRRIVRRDLAHGG 62
Query: 63 NYGP 66 NYGP Sbjct: 63 NYGP 66
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN50358.1 | 6.2e-04 | 53.13 | hypothetical protein Csa_000417 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KL54 | 3.0e-04 | 53.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168950 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 34..68 |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS017924.1 | MS017924.1 | mRNA |
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