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MS017923 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACGACCCTACATAATACAAAAATCACTCTTGGAAAAGGGGGACAATTAGTTAGAGCAGCAAGTATTATAGCAAAATTAACGGAAAAAGGGGAGAAATCAAGCACATTAAAATTA ACGACCCTACATAATACAAAAATCACTCTTGGAAAAGGGGGACAATTAGTTAGAGCAGCAAGTATTATAGCAAAATTAACGGAAAAAGGGGAGAAATCAAGCACATTAAAATTA ACGACCCTACATAATACAAAAATCACTCTTGGAAAAGGGGGACAATTAGTTAGAGCAGCAAGTATTATAGCAAAATTAACGGAAAAAGGGGAGAAATCAAGCACATTAAAATTA TTLHNTKITLGKGGQLVRAASIIAKLTEKGEKSSTLKL Homology
BLAST of MS017923 vs. NCBI nr
Match: XP_024964635.1 (uncharacterized protein LOC112504912 [Cynara cardunculus var. scolymus]) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
BLAST of MS017923 vs. NCBI nr
Match: KVG37573.1 (Ribosomal protein L2 [Cynara cardunculus var. scolymus]) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
BLAST of MS017923 vs. NCBI nr
Match: RYR45922.1 (hypothetical protein Ahy_A07g031691 isoform A [Arachis hypogaea]) HSP 1 Score: 53.1 bits (126), Expect = 5.9e-04 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. NCBI nr
Match: RZC71849.1 (hypothetical protein C5167_035027 [Papaver somniferum]) HSP 1 Score: 53.1 bits (126), Expect = 5.9e-04 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. NCBI nr
Match: YP_009466290.1 (ribosomal protein L2 [Genlisea aurea] >YP_009466305.1 ribosomal protein L2 [Genlisea aurea] >YP_009466592.1 ribosomal protein L2 [Genlisea tuberosa] >YP_009466607.1 ribosomal protein L2 [Genlisea tuberosa] >AUN28344.1 ribosomal protein L2 [Genlisea aurea] >AUN28359.1 ribosomal protein L2 [Genlisea aurea] >AUN28646.1 ribosomal protein L2 [Genlisea tuberosa] >AUN28660.1 ribosomal protein L2 [Genlisea tuberosa]) HSP 1 Score: 52.8 bits (125), Expect = 7.8e-04 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. ExPASy Swiss-Prot
Match: Q06R66 (50S ribosomal protein L2, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.9e-06 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of MS017923 vs. ExPASy Swiss-Prot
Match: B0Z4R7 (50S ribosomal protein L2, chloroplastic OS=Oenothera argillicola OX=3940 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.6e-06 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MS017923 vs. ExPASy Swiss-Prot
Match: B0Z501 (50S ribosomal protein L2, chloroplastic OS=Oenothera biennis OX=3942 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.6e-06 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MS017923 vs. ExPASy Swiss-Prot
Match: Q9MDU0 (50S ribosomal protein L2, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=rpl2-A PE=3 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 6.6e-06 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MS017923 vs. ExPASy Swiss-Prot
Match: B0Z585 (50S ribosomal protein L2, chloroplastic OS=Oenothera glazioviana OX=482428 GN=rpl2-A PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.6e-06 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MS017923 vs. ExPASy TrEMBL
Match: A0A103PUL6 (Ribosomal protein L2 OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_026461 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.8e-05 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
BLAST of MS017923 vs. ExPASy TrEMBL
Match: A0A4Y7KIS3 (Ribosomal_L2_C domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_035027 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.9e-04 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. ExPASy TrEMBL
Match: A0A445C4R6 (Ribosomal_L2_C domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A07g031691 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.9e-04 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. ExPASy TrEMBL
Match: A0A2I6QDG7 (50S ribosomal protein L2, chloroplastic OS=Genlisea filiformis OX=700924 GN=rpl2 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. ExPASy TrEMBL
Match: A0A2I6QDQ4 (50S ribosomal protein L2, chloroplastic OS=Genlisea pygmaea OX=700922 GN=rpl2 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.8e-04 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of MS017923 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 ) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-06 Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
BLAST of MS017923 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 ) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-06 Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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