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MS017920 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGGTGCGTGGCGATTCTGGTGGGTCAACAAGGCGAGCAGCGACAGAGGTTCGTCATCCCCCATCTTTTGTTCGTCCAGCTCCTCAACGACGCCAAGGAGGAGCATGGCTTTAACCACCATGGCCCATCTCTAATCCCC AAGGGGTGCGTGGCGATTCTGGTGGGTCAACAAGGCGAGCAGCGACAGAGGTTCGTCATCCCCCATCTTTTGTTCGTCCAGCTCCTCAACGACGCCAAGGAGGAGCATGGCTTTAACCACCATGGCCCATCTCTAATCCCC AAGGGGTGCGTGGCGATTCTGGTGGGTCAACAAGGCGAGCAGCGACAGAGGTTCGTCATCCCCCATCTTTTGTTCGTCCAGCTCCTCAACGACGCCAAGGAGGAGCATGGCTTTAACCACCATGGCCCATCTCTAATCCCC KGCVAILVGQQGEQRQRFVIPHLLFVQLLNDAKEEHGFNHHGPSLIP Homology
BLAST of MS017920 vs. NCBI nr
Match: KAE8077630.1 (hypothetical protein FH972_016177 [Carpinus fangiana]) HSP 1 Score: 70.1 bits (170), Expect = 5.8e-09 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MS017920 vs. NCBI nr
Match: KAG9133963.1 (hypothetical protein Leryth_004671 [Lithospermum erythrorhizon]) HSP 1 Score: 70.1 bits (170), Expect = 5.8e-09 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. NCBI nr
Match: XP_027109983.1 (auxin-responsive protein SAUR32-like [Coffea arabica]) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. NCBI nr
Match: KAF7816642.1 (auxin-responsive protein SAUR32 [Senna tora]) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MS017920 vs. NCBI nr
Match: XP_027159989.1 (auxin-responsive protein SAUR32-like [Coffea eugenioides]) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.9e-09 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of MS017920 vs. ExPASy TrEMBL
Match: A0A5N6RIC8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016177 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MS017920 vs. ExPASy TrEMBL
Match: A0A6P6W3P2 (auxin-responsive protein SAUR32-like OS=Coffea arabica OX=13443 GN=LOC113729879 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. ExPASy TrEMBL
Match: A0A6P6VLD4 (auxin-responsive protein SAUR32-like OS=Coffea arabica OX=13443 GN=LOC113724837 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. ExPASy TrEMBL
Match: A0A6A5MGW4 (Putative small auxin-up RNA OS=Lupinus albus OX=3870 GN=Lal_00020482 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.1e-08 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. ExPASy TrEMBL
Match: A0A4P1QXA1 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_08729 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.1e-08 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of MS017920 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 60.1 bits (144), Expect = 5.6e-10 Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of MS017920 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 57.0 bits (136), Expect = 4.7e-09 Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of MS017920 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 54.3 bits (129), Expect = 3.1e-08 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of MS017920 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 52.0 bits (123), Expect = 1.5e-07 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of MS017920 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 43.5 bits (101), Expect = 5.4e-05 Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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