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MS017895 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTGCAGCTCATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCTTCGTCACGGATAAACAAAGTGGTTTTACCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGACAGGGCATTGGATTATGTCATTATTTTGTGCGCCTTACCTCTATTACAATTTGAGATTGTAAGTTTCTCTTGTTCCTGCATATTTGATCAGATTGTAAACTAAATTGAGAAGTATTGACAGCAGGCTATAAAATTAAAAGAAAAAGGGAAAATAAAAGAAGAGATACGATTGTATAATTATTAGTGGGGTATACGCGTTAAATTGGTTACCAATTTCACCTATGAGAACCTCATTTATTGTTCTGGGCTCTGCCTTCCAAATTAAGGTCAAATTGTTTACTTTGAAAGAGAGGGCATATCATGCCTGCAATTAACGCTTGGTAGCCAAGTGCAGGGTGGGTAACAGTTGAAAGTATCCAAGTTATAAACCCTATAGCTTTTTTCTTTGAATGTATGAATTGTTTTGAAGCACCAATAATCTATTATGAGATTTAGATTACTATCATTAGTTTTTGGATTGGTTAATTTGTGTTGGGATGGTTGAGAATCGGAGGAGGTCTCATGGTTACTCTCTTTGGAGATTCACTCTGCAGTAGTTTAACTAATTTACAGTGGATATCATAACTACTGATATCTAGCATATTTTGAGATTGGGCCGAATACTTGACTTGTTTGGTGCTGGTAATTCATGTCAAGCTTCTTGATCTGTCTGACGTGTGTCTTTTCCTCATGATTTTAGGTACACTCAGCGACAGCACCTGGTAGATGTTACCGAGATATTCAATCAGTTAACTTGGGAAAAGAAGAAAAGGCTTTTCAAACTAGTCTATCTTGTTTCTCTCCTCTTTCTTTCCATATTTTGG TTGTTGCAGCTCATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCTTCGTCACGGATAAACAAAGTGGTTTTACCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGACAGGGCATTGGATTATGTCATTATTTTGTGCGCCTTACCTCTATTACAATTTGAGATTGTACACTCAGCGACAGCACCTGGTAGATGTTACCGAGATATTCAATCAGTTAACTTGGGAAAAGAAGAAAAGGCTTTTCAAACTAGTCTATCTTGTTTCTCTCCTCTTTCTTTCCATATTTTGG TTGTTGCAGCTCATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCTTCGTCACGGATAAACAAAGTGGTTTTACCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGACAGGGCATTGGATTATGTCATTATTTTGTGCGCCTTACCTCTATTACAATTTGAGATTGTACACTCAGCGACAGCACCTGGTAGATGTTACCGAGATATTCAATCAGTTAACTTGGGAAAAGAAGAAAAGGCTTTTCAAACTAGTCTATCTTGTTTCTCTCCTCTTTCTTTCCATATTTTGG LLQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLRLYTQRQHLVDVTEIFNQLTWEKKKRLFKLVYLVSLLFLSIFW Homology
BLAST of MS017895 vs. NCBI nr
Match: XP_022158397.1 (protein cornichon homolog 4 [Momordica charantia]) HSP 1 Score: 211.1 bits (536), Expect = 4.7e-51 Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of MS017895 vs. NCBI nr
Match: XP_022957749.1 (protein cornichon homolog 4-like [Cucurbita moschata]) HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6579448.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016921.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201.8 bits (512), Expect = 2.9e-48 Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of MS017895 vs. NCBI nr
Match: XP_022969840.1 (protein cornichon homolog 4-like [Cucurbita maxima]) HSP 1 Score: 201.4 bits (511), Expect = 3.7e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6606147.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 201.4 bits (511), Expect = 3.7e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 7.6e-44 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of MS017895 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2) HSP 1 Score: 176.0 bits (445), Expect = 2.2e-43 Identity = 82/105 (78.10%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of MS017895 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.1e-40 Identity = 76/103 (73.79%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of MS017895 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 8.7e-32 Identity = 59/105 (56.19%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of MS017895 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.3e-23 Identity = 49/102 (48.04%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of MS017895 vs. ExPASy TrEMBL
Match: A0A6J1DX47 (protein cornichon homolog 4 OS=Momordica charantia OX=3673 GN=LOC111024886 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.3e-51 Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of MS017895 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48 Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of MS017895 vs. ExPASy TrEMBL
Match: A0A6J1I130 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48 Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS017895 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein ) HSP 1 Score: 177.6 bits (449), Expect = 5.4e-45 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of MS017895 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein ) HSP 1 Score: 176.0 bits (445), Expect = 1.6e-44 Identity = 82/105 (78.10%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of MS017895 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein ) HSP 1 Score: 164.9 bits (416), Expect = 3.6e-41 Identity = 76/103 (73.79%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of MS017895 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein ) HSP 1 Score: 137.5 bits (345), Expect = 6.2e-33 Identity = 59/105 (56.19%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of MS017895 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein ) HSP 1 Score: 108.6 bits (270), Expect = 3.1e-24 Identity = 49/102 (48.04%), Postives = 74/102 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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