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MS017887 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGGTTTTTCTTTCTTACCAAAACCATTTCCCTTTTTTGATGTTATAGAAGGATATGAAAATAATGGGGTTTTTTGGTTTTAGCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGCTTTGAC ATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGCTTTGAC ATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGCTTTGAC MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDRFD Homology
BLAST of MS017887 vs. NCBI nr
Match: XP_022159680.1 (protein LITTLE ZIPPER 2-like isoform X2 [Momordica charantia]) HSP 1 Score: 186.8 bits (473), Expect = 8.9e-44 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of MS017887 vs. NCBI nr
Match: XP_022159679.1 (protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 180.6 bits (457), Expect = 6.4e-42 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of MS017887 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33 Identity = 81/96 (84.38%), Postives = 86/96 (89.58%), Query Frame = 0
BLAST of MS017887 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MS017887 vs. NCBI nr
Match: KAE8647881.1 (hypothetical protein Csa_000025 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29 Identity = 76/96 (79.17%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of MS017887 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of MS017887 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07 Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of MS017887 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.3e-44 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of MS017887 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0
BLAST of MS017887 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.9e-30 Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of MS017887 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28 Identity = 75/96 (78.12%), Postives = 83/96 (86.46%), Query Frame = 0
BLAST of MS017887 vs. ExPASy TrEMBL
Match: A0A7J0FTG6 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_14g0008630 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22 Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of MS017887 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of MS017887 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08 Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of MS017887 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08 Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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