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MS017877 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGCAGCTTCTTCAACCCTCTGTGTCTCTGCGATCGTTGCGCCAAGGTTTTCAATTTTCCTCTCTATCTTTCCTTCCCAGTCCCTCTAATTCCATCCGATTTCGACCCTTCTCCTCCAAAATGTCGGCCGATTCTCCAGCTCCAAGTCAATCCATCACCCTGCCTTGTCAAATCCAGCAGCCCGTGCAGATTGTCGCCGCACCCGGCGTCTCCGATTCCGATTTCCGGCTAGTTCAATACCCTTTCTAATCTTCTTCTTAATGTCACGAATGTGCAACGAAGATTACTTTCTAATTTCATTGATTATATTTTTTGGGTTCTTTTTTTTTTTCGGTGCTCTATATTGCAGGAATGCTATTGATTCATCATTGTTCAAGCAGTGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCGAAGGGAGCCATGTCTCTGAAACGAGTACTTATTCAGGTTGTGGAGAAAAGAACTATCCATTTTTAGCGTCGAATTTTTTATTGTTTCACTTTTTGGTTATGATTGATTGAGGGGTTTTTGTTTCAGGGAGTTGATATGTTCGGAAGTAAAATTGGGTTTCTCAAATTCAAAGCCGATATCTATGATAAGGAATCGGGGAAGAAGGTATCTGGCGATTACCATTTATTCTTTCTGCTGCCGAATTTGTTGAAATCTGTTAATTGAGACTAATAGTGAGTTTGGAATGCCTTTTGAGAACTGTATTTCTAAGTTAAACTCTTTCTGTTAGCACTTTTAGGAGAAAACTATGCAAAACACTTCCCAAGTGCTTTTATCTGTTTTCAGTTTTTAACCAAACACTGCCAATTTTTACAAAACACTCTTAGGTGTCCATAAATACTTTAAGAGGCTGGTCAAACACATCCCAAAATCAACTTAACTTTATTTAGATTAGTCTATCTGTTTTTCTTACTTTCATCAGAACGAGGCCCTGTTCAATCAGTATTATGCTAGCTGCTAAGGAAATCAATTAGTCACTAATATAATAAGATGTAAACAAACTTTGGGGAATCGATGATTGGTGCTGTTTCTTTCTTTTCCACGAACTAAAACTTGCTTAGGTTCCAGGTATTGTATTTGCTAGAGGACCTGCTGTCGCTGTGCTTATCCTTTTGGACTGTGGAGGAGAAACTTATGCTGTTCTGACCGAGCAGGTTGTTGTTTTGTTTGTTATTACATTTTGAAGTTCGCCAGTTTTATTGAGATATAAATCCTTAGCATGTAAGTCGATGCTATACTAAATAACTATCAGGGGTTGCAATTATTGGGTTGTTTATAGTGTGAAACACTATTTGAAATTTGAATTCTGATCACACTGAGTTGAAATTTCATGTGTTAAGGTCAGAGTTCCTGTTGGGAAACTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGACAAGGGGGATTTTGTTGGCACAGCCGTTCGTGAGGTCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGATGTAAATTTCTGTTTGTATAAATCGAAAAATGAAAATCCTTGAGTTTATGTTGATATACTGATCTATGGTAATTTCATTCTTCTTTTTCTTCGTGAAATCTCTGTTTTTCTCATCTCCTCTAGATATATTTTTTGTGTTAATTATCAAGTTGTGGTTTGATGCAAAGAGGTACATGTTGATGTAGAAGCAAAATGTTAGTGACTTATACATGAAGAGTTGTGCAAAAGAGAAATCTAATGCACGATAAAAATATTACCCAATTTTTTACTAGATAATCCAAGTTTTGCAGGTCTTCATTTAAGGAAGAGTGAAAGTTTTCCATGGCTTGATGTGTTATTTGGTGTGGCAATCATGGCAGGTCGAAGAGGAAATCGGCATTCAGTTAAAGCTTGAGGACATGGTCGACCTTACTAGCTTCCTTGACCCCTTGACTGGATGCAGAGTCTTCCCTTCTCCAGTAAGTTCGCATTTAACAAGTATCAATCTCTGACGTTTTAGTAAGAGCTACTGTTTTTGTAATATAAGGTAGAGGATCCATCTTAATCTTATAACTCAGTACAAGTTTCCAGCCAAACAGAATTGTAATGAGAAAAAGACTGGCAATGCTGGTTCCAACTACCTAGTTCCCACACCAGCCCACGACATTCGAGAGTGCCTCACTCTACCCACCGACGACTACCCAAAAAGTCTCCTGTCTCTTCTAAATCACCTCACTTACTTTCCCATTTTTCAGTTCCTCGAAATTGGAGGCTTGTCACAGTTCCAAAGAAACTACTACACAAAAAACACCCCGAACATCTTAGTTTTTTCGTTTGCCACATCATCGTTTCATAAATTCCCCACTTGCCCTTGTTTTTTGTATATCAGCAAGGCAGGACTGATTGTTATTTTACATGTTCGTGGTTAGGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTACCGAGGTCCCGCAAGTAAAGAGACTATTTCAGAGCTGCAAGGAAGGGAAACTGGCCTCAGAGAACATGGTGAGCTGATTAAGGTTCATGTGGTTCCCTATGGAAAACTCTGGAGGGTAACAGCAGATGCAAAGGCCCTAATGGCCATTGCACTCTATGAAATGGCTCAGAGGGAAGGGCTTTTGCCTTCTCTTCACCCT ATGACGCAGCTTCTTCAACCCTCTGTGTCTCTGCGATCGTTGCGCCAAGGTTTTCAATTTTCCTCTCTATCTTTCCTTCCCAGTCCCTCTAATTCCATCCGATTTCGACCCTTCTCCTCCAAAATGTCGGCCGATTCTCCAGCTCCAAGTCAATCCATCACCCTGCCTTGTCAAATCCAGCAGCCCGTGCAGATTGTCGCCGCACCCGGCGTCTCCGATTCCGATTTCAATGCTATTGATTCATCATTGTTCAAGCAGTGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCGAAGGGAGCCATGTCTCTGAAACGAGTACTTATTCAGGGAGTTGATATGTTCGGAAGTAAAATTGGGTTTCTCAAATTCAAAGCCGATATCTATGATAAGGAATCGGGGAAGAAGGTTCCAGGTATTGTATTTGCTAGAGGACCTGCTGTCGCTGTGCTTATCCTTTTGGACTGTGGAGGAGAAACTTATGCTGTTCTGACCGAGCAGGTTGTCAGAGTTCCTGTTGGGAAACTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGACAAGGGGGATTTTGTTGGCACAGCCGTTCGTGAGGTCGAAGAGGAAATCGGCATTCAGTTAAAGCTTGAGGACATGGTCGACCTTACTAGCTTCCTTGACCCCTTGACTGGATGCAGAGTCTTCCCTTCTCCAGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTACCGAGGTCCCGCAAGTAAAGAGACTATTTCAGAGCTGCAAGGAAGGGAAACTGGCCTCAGAGAACATGGTGAGCTGATTAAGGTTCATGTGGTTCCCTATGGAAAACTCTGGAGGGTAACAGCAGATGCAAAGGCCCTAATGGCCATTGCACTCTATGAAATGGCTCAGAGGGAAGGGCTTTTGCCTTCTCTTCACCCT ATGACGCAGCTTCTTCAACCCTCTGTGTCTCTGCGATCGTTGCGCCAAGGTTTTCAATTTTCCTCTCTATCTTTCCTTCCCAGTCCCTCTAATTCCATCCGATTTCGACCCTTCTCCTCCAAAATGTCGGCCGATTCTCCAGCTCCAAGTCAATCCATCACCCTGCCTTGTCAAATCCAGCAGCCCGTGCAGATTGTCGCCGCACCCGGCGTCTCCGATTCCGATTTCAATGCTATTGATTCATCATTGTTCAAGCAGTGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCGAAGGGAGCCATGTCTCTGAAACGAGTACTTATTCAGGGAGTTGATATGTTCGGAAGTAAAATTGGGTTTCTCAAATTCAAAGCCGATATCTATGATAAGGAATCGGGGAAGAAGGTTCCAGGTATTGTATTTGCTAGAGGACCTGCTGTCGCTGTGCTTATCCTTTTGGACTGTGGAGGAGAAACTTATGCTGTTCTGACCGAGCAGGTTGTCAGAGTTCCTGTTGGGAAACTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGACAAGGGGGATTTTGTTGGCACAGCCGTTCGTGAGGTCGAAGAGGAAATCGGCATTCAGTTAAAGCTTGAGGACATGGTCGACCTTACTAGCTTCCTTGACCCCTTGACTGGATGCAGAGTCTTCCCTTCTCCAGGAGGATGTGATGAGGGAATCGGTCTCTTCTTGTACCGAGGTCCCGCAAGTAAAGAGACTATTTCAGAGCTGCAAGGAAGGGAAACTGGCCTCAGAGAACATGGTGAGCTGATTAAGGTTCATGTGGTTCCCTATGGAAAACTCTGGAGGGTAACAGCAGATGCAAAGGCCCTAATGGCCATTGCACTCTATGAAATGGCTCAGAGGGAAGGGCTTTTGCCTTCTCTTCACCCT MTQLLQPSVSLRSLRQGFQFSSLSFLPSPSNSIRFRPFSSKMSADSPAPSQSITLPCQIQQPVQIVAAPGVSDSDFNAIDSSLFKQWLMNLQGESGILAKGAMSLKRVLIQGVDMFGSKIGFLKFKADIYDKESGKKVPGIVFARGPAVAVLILLDCGGETYAVLTEQVVRVPVGKLMLELPAGMLDDDKGDFVGTAVREVEEEIGIQLKLEDMVDLTSFLDPLTGCRVFPSPGGCDEGIGLFLYRGPASKETISELQGRETGLREHGELIKVHVVPYGKLWRVTADAKALMAIALYEMAQREGLLPSLHP Homology
BLAST of MS017877 vs. NCBI nr
Match: XP_022131255.1 (nudix hydrolase 14, chloroplastic [Momordica charantia]) HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162 Identity = 304/313 (97.12%), Postives = 305/313 (97.44%), Query Frame = 0
BLAST of MS017877 vs. NCBI nr
Match: XP_038876088.1 (nudix hydrolase 14, chloroplastic [Benincasa hispida]) HSP 1 Score: 521.5 bits (1342), Expect = 4.8e-144 Identity = 273/313 (87.22%), Postives = 287/313 (91.69%), Query Frame = 0
BLAST of MS017877 vs. NCBI nr
Match: XP_023549705.1 (nudix hydrolase 14, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.0 bits (1312), Expect = 1.5e-140 Identity = 266/310 (85.81%), Postives = 284/310 (91.61%), Query Frame = 0
BLAST of MS017877 vs. NCBI nr
Match: XP_008437180.1 (PREDICTED: nudix hydrolase 14, chloroplastic [Cucumis melo]) HSP 1 Score: 508.8 bits (1309), Expect = 3.2e-140 Identity = 267/313 (85.30%), Postives = 283/313 (90.42%), Query Frame = 0
BLAST of MS017877 vs. NCBI nr
Match: KAA0042819.1 (nudix hydrolase 14 [Cucumis melo var. makuwa]) HSP 1 Score: 505.4 bits (1300), Expect = 3.6e-139 Identity = 266/313 (84.98%), Postives = 282/313 (90.10%), Query Frame = 0
BLAST of MS017877 vs. ExPASy Swiss-Prot
Match: Q9SZ63 (Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT14 PE=1 SV=2) HSP 1 Score: 398.7 bits (1023), Expect = 6.2e-110 Identity = 201/269 (74.72%), Postives = 232/269 (86.25%), Query Frame = 0
BLAST of MS017877 vs. ExPASy Swiss-Prot
Match: O61902 (Putative nudix hydrolase 2 OS=Caenorhabditis elegans OX=6239 GN=ndx-2 PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 6.0e-04 Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of MS017877 vs. ExPASy TrEMBL
Match: A0A6J1BP72 (nudix hydrolase 14, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004513 PE=4 SV=1) HSP 1 Score: 583.2 bits (1502), Expect = 6.5e-163 Identity = 304/313 (97.12%), Postives = 305/313 (97.44%), Query Frame = 0
BLAST of MS017877 vs. ExPASy TrEMBL
Match: A0A1S3ATD5 (nudix hydrolase 14, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482685 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.6e-140 Identity = 267/313 (85.30%), Postives = 283/313 (90.42%), Query Frame = 0
BLAST of MS017877 vs. ExPASy TrEMBL
Match: A0A5A7TN73 (Nudix hydrolase 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003260 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.7e-139 Identity = 266/313 (84.98%), Postives = 282/313 (90.10%), Query Frame = 0
BLAST of MS017877 vs. ExPASy TrEMBL
Match: A0A6J1I286 (nudix hydrolase 14, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468947 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.3e-139 Identity = 265/311 (85.21%), Postives = 284/311 (91.32%), Query Frame = 0
BLAST of MS017877 vs. ExPASy TrEMBL
Match: A0A6J1E7S8 (nudix hydrolase 14, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430183 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.9e-138 Identity = 261/310 (84.19%), Postives = 281/310 (90.65%), Query Frame = 0
BLAST of MS017877 vs. TAIR 10
Match: AT4G11980.1 (nudix hydrolase homolog 14 ) HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-111 Identity = 201/269 (74.72%), Postives = 232/269 (86.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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