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MS017860 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGGGACTAAGGACATACCCGGACAGAAGGCGTGATGGATTACCACATTTCGACGTCAACCAAGGCGAGGTTCTCATGCACATCGTGCCTGCCATCGCCCTCGTATTCGATAATCGCCTTCCCGAGTTCCCTGGTACTCTTTACGTCTCCTCTAGGTACATTCTTTCTCTCCGCTTTTTCGCGTTTTCGCATCATTTTCTTCGACAATGTCTGTTCTAGAGGAGGGAAACTGAAAGAAAATTTTGGGAATTAGGATCCCTTTTGCGTGGGGAACATGTCTTTTTCTTTTAAAATTGATTTTCGATGAGCAAGGGGAGGGGTGGAACGTATTGGTTTCTTGAAAATGAAGAGCGTTTCTGAATCTTGGGATGAAACGATCGCTTTTGGGAATTTGATTGCTGATGCGAGTATGAGAAAGAAAATACCACCCTCTAAAGATATAAAGATAAAAGGAAATCAATACAAAAGTTGAAATTAAAAATAAATGTTGAAGAAAAAAAGAACAGAAATTATACTCAACTTGAACAGTGATGGTTATTTACCTTGCCTGCATATGATGCTCACCATATATTCAAATTCAATCATTATACATGATTGCCTAATGATCTTGTGTATGAAATTCATCAATTTACCAAAGTTAACATTAGACTTGTTGTGCACGAGATGCAGTTTTTGGTCTAACATTAACTTGTTAAATACTTTTCCTTATGAAAAGAAAACATATTGGTTAAGGTTCAGAAAAGGAATCCTTGGATTTTCTTGATACCTTTTTTGGTGTGTTGTGTGGATGGGTAGTGAGTGGAAAGCCAACTGCCTTTTATTCACTGTAAGCAATCAGGTGAAAATCCCTGCTTTTTTGGGTTTTAATCATGTCTGGCCAATCTATAGTTTATCTTTGGTTGTATTTTGTTCGAGCAATTTTATGCGCTATTTGGTTAGAAAGGAATCATAGGGTTTTCCATGACCAAAAGCTTCCTTTTGATCCTTGTATTTGAATCTGTAGTCTTTGTAGTTGCGTCTTGGTGCAAATGTTTCCCTCTCTTTCATCACTTTAGTATATCTTTTTTGGCATCCAATTGGAGAGGTTTTTTGTAACTCATTTGGATTGGGATTATCCCCCTTTTGTACTTCTAATTTCATATCATCAATGAAATTGTTTCTTTAAAAAAAAAAAAATAATAATGTCTGGCCAATCATTGTCAAAGTTTTATGTTTTCTCTAATTCAATCTTGCATGGGTTATCCTTCCATGGAGAAGACTAAAGTTTTGTGAATCATTCCATCTTTGCTATTATCTTGGGAGTTTTGTTTGAAAGTAGTAGAAAGAAGACTATTCTAAGACTTGATAAACCTTTGGTGTTTATTTTTCTCGAGGCCTCCAATTGGATCTGTCTCTCTTTTGGCTTTGTAATATATCTCTCCATCGTTTTAGCCAATTATAGTGTTCTATGATCCCTTTTGGTCTTGACTTGGGTGATTTTTTATCCATCCTTGCGTGCTTCCATTCTTGATGAGATGTTTTCATTTGCTGTCTCTCTCATATATGTATGTAGAGGCTTAAAGCGAAGATTTTTTGTGGCTTCCCCTCAATGCAACAGTGTCAGTTTTTTCAATGATTGCTCACTGGTTTTCTTTAAATATAAAGTTAAAAGTTTCCAGGTGGCTGCTGTATAGGCTTGCAATTAGGAGATTAGGCTAGAAAGGGTCTTTCCAAAATGTGGCTAGAGGGGAACAAGACGTTTGGGAGTTTGCCATTACAAAGTGTGTTTTTTATTTCTCTGTAATTTTTTTGGTAGTTGTTATATATGTTTCTTAATCGAAGCCCATTAGATGAAGTTTTTGTAACATCATTGGCTGGTTCCTTACCACCCTCTTTTGGAGTCTTTGTTTTTTGTTTTATTCTATTAAAAAAGGATAATGGGAAGATCATTGTAGTATTAGTTAATACCAAATCAATGGCAAGGCTAAGCCAACCACTATTGAACAAAATTTCTTAATTCTTTTTTATTACTTTGGTTTTTGATAGATAAGCTGATTTTTTCTAACATTTGTTCCCGTCGTTTCTTTTCCTGTTGTCTCCTTTTGTAGTTGGCATGCGAGTACTCTTCTTGTATCAAATGAAAAAAATTCCTTGGTTATTATCATATGTTTTTATGTAGAAAACTTATTTGTTAATTGAATATTTTGTTTTAATTGCATACTCTTCAATTGAACATGTTCTATTAAAAAAAAAAATTAATAGATTAACTTGTTGACATGTTGAGAAAATTTAACCTGTTTGTAGGCAACTGGTTTGGTTGAGTGACGCGATTCAGACAAAAGGCTTTGCAATTGATTTCCTATCAATGTCATTACATGCAGTTTCAAAAGACCCCGATGCCTATCCTCATCCTTGTTTATATGTCCAGGTA ATGGCTATGGGACTAAGGACATACCCGGACAGAAGGCGTGATGGATTACCACATTTCGACGTCAACCAAGGCGAGGTTCTCATGCACATCGTGCCTGCCATCGCCCTCGTATTCGATAATCGCCTTCCCGAGTTCCCTGGTACTCTTTACGTCTCCTCTAGGCAACTGGTTTGGTTGAGTGACGCGATTCAGACAAAAGGCTTTGCAATTGATTTCCTATCAATGTCATTACATGCAGTTTCAAAAGACCCCGATGCCTATCCTCATCCTTGTTTATATGTCCAGGTA ATGGCTATGGGACTAAGGACATACCCGGACAGAAGGCGTGATGGATTACCACATTTCGACGTCAACCAAGGCGAGGTTCTCATGCACATCGTGCCTGCCATCGCCCTCGTATTCGATAATCGCCTTCCCGAGTTCCCTGGTACTCTTTACGTCTCCTCTAGGCAACTGGTTTGGTTGAGTGACGCGATTCAGACAAAAGGCTTTGCAATTGATTTCCTATCAATGTCATTACATGCAGTTTCAAAAGACCCCGATGCCTATCCTCATCCTTGTTTATATGTCCAGGTA MAMGLRTYPDRRRDGLPHFDVNQGEVLMHIVPAIALVFDNRLPEFPGTLYVSSRQLVWLSDAIQTKGFAIDFLSMSLHAVSKDPDAYPHPCLYVQV Homology
BLAST of MS017860 vs. NCBI nr
Match: XP_022159658.1 (chloride conductance regulatory protein ICln [Momordica charantia]) HSP 1 Score: 204.9 bits (520), Expect = 3.1e-49 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of MS017860 vs. NCBI nr
Match: XP_008467269.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X2 [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 2.1e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. NCBI nr
Match: KAA0055130.1 (chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa] >TYK20729.1 chloride conductance regulatory protein ICln isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 155.6 bits (392), Expect = 2.1e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. NCBI nr
Match: XP_008467268.1 (PREDICTED: chloride conductance regulatory protein ICln isoform X1 [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 2.1e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. NCBI nr
Match: XP_038906602.1 (chloride conductance regulatory protein ICln [Benincasa hispida]) HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of MS017860 vs. ExPASy Swiss-Prot
Match: Q9LVA7 (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=At5g62290 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24 Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of MS017860 vs. ExPASy Swiss-Prot
Match: Q61189 (Methylosome subunit pICln OS=Mus musculus OX=10090 GN=Clns1a PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06 Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of MS017860 vs. ExPASy Swiss-Prot
Match: Q28678 (Methylosome subunit pICln OS=Oryctolagus cuniculus OX=9986 GN=CLNS1A PE=2 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06 Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of MS017860 vs. ExPASy Swiss-Prot
Match: Q04753 (Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06 Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of MS017860 vs. ExPASy Swiss-Prot
Match: P54106 (Methylosome subunit pICln OS=Xenopus laevis OX=8355 GN=clns1a PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.6e-06 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of MS017860 vs. ExPASy TrEMBL
Match: A0A6J1DZF8 (chloride conductance regulatory protein ICln OS=Momordica charantia OX=3673 GN=LOC111026002 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.5e-49 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of MS017860 vs. ExPASy TrEMBL
Match: A0A5D3DBS0 (Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001310 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. ExPASy TrEMBL
Match: A0A1S3CUF8 (chloride conductance regulatory protein ICln isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. ExPASy TrEMBL
Match: A0A1S3CTC6 (chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of MS017860 vs. ExPASy TrEMBL
Match: A0A0A0KPP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 8.8e-34 Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of MS017860 vs. TAIR 10
Match: AT5G62290.1 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25 Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of MS017860 vs. TAIR 10
Match: AT5G62290.2 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25 Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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