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MS017849 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAACAGGTTGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCATGTTCACTGACGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGGTATGTTAATTCACTCACACCCTTCTTCTCCTATTAAAATATACTGAGAATTGCGGATCGTTGCTCTGGATTTTCAGTTTTAAATTTATAAAATCAGCCCTACTTGTAAACCTGTTCGTATGGGAACTGGTGTAGCTGATCTAGTTATTCCGAAAATGAAGCTTCAGAAGTTCTTGTTTAGCTTTGGGAATTTAATGCACACTTTCCTCTGGTTTTTCATTGCTAGTTGGACATAAACTTACTGAATAATGCTCACTCTCATTAAGATTCTTACAGTTGATTAACAATTTTATTATCATGATGACTGGACTCAATCGAGCTCTGTTGTCCTGGGGCCGTCAATGATAATAAGAAAAAATATATATATTTAGTTAGGGACTTTGTGGTTCGTTCTAATGATTGTTTGGAACAAACTTCAATACAGAACTTCAACGGTCGGTGAGGGTGGGGTGCATTGAAGTTCCTCAGTTTTGTATTTGATTGTCTTCATTGTATTAGCGGTCAAATGAAAAGATTCTCAAGTGGTTTAAAACCAGTATAACACATTTTTTGGGATGTAACATTGTTTTTTATTCGCGCACAAGTTAAAAATTGTATAATGAAGATACTTCTATTTTTACTTCACTATTCTTTTATTCAGTTTCTAAGCTAGTAGTTGGAAAGCCTCAACTTATCTTGGTTGTGATGCCCACCAATAGTTGGGTTCATAACAAATTGCGGGTACGAAGCCATAAGAACTCTCTTCAGGTATGAAGTTCAGGGCTTTGTAGGCTTCAACAGTTTCTCAACTAGTTGTTAACCGCAATATATTTCACCATGACGTCACTAAAGGTTGGGTATGTGACATGGTAGTAACCTCTTCTCAATAGAGTTGACTATGAAGTTTTAGGAGCTATGCAAACCCCAACAGTTTTTTAACCGATTGGGCAGACGTCAATCTATCTCAACCTCAAAGCTATTAATGTCGGCCACAATGAACTTCGGCTACGAAGCAATAAAATTTCTCACAGTCATAAACCCCACTTAGCCAAGTGAATTGCGAAATCTAAGCCCATGCAAGCTTTAGCGTAGGGTTTAACAATCATAAACATCTAAACCAAGAATTCAAGATAACACTAGGAAAGGTTGATTTCATTAACAAAAAGGCATGGCCAGGATTAGGATTAGGGGTAATAAGGGATATAAGAGTCTAATCTAGGTGACATCTTCCTTGCTTGATTCATCTGCTACACCTTCAACTTGAGCAATGTCCTTTACGAAAGTTGTCCACTTCAAGCTAATCCTTCTCTCTAACAGTCGCCTTAAAGCTCCTTAAGTCTTGAAATTGCTACAAGTGCTCAATGTCTAGCATGACCACACCTTCTGGACGGACGATTAACTTCCATACTACTTAAGTCTGGGATATGATAGACCACTTTTGGGACCCCTGGAGGCAGTGTTTTTGAGCTATGGTGCAAGACAACATGGGGTGGACACTTCCTGCCTTGCAAGAAGCAACGCAGAGCTCTTTCAACATGGTGCCCAACCATTGTGCACCATTTTGCGCCACAATAATGGTGAGGCGAGTGCCTTAGTAACGAACAACAATGATAGGTGTAGGATAGAGGGCGCAAGGAATTTTAATTAAAACCTGAATCAGTTGGTAATCAATCAGAAACTACTCAAAGAAAGCCCATTAGAACAGCCCACTTGATCTTCCTACTCCTTAGCCCACCATTGCAAGACATTGAAGCTTGAAAAGTTGAAACATTCACATAAGTTGTATGAAGCTTTAACCTGAAATGTGAGTAAGTTTCTTGCTTCTTTTATTTCAATCTTTTGTGATTCTCCTCCCGAGGACAACAATGAAGAGTGGATGTGAATTAAAAAAAAAGATGGTAAAGTAAATTTAATTTTTGAACTATCTACAAGGTAAAATACAAATTATGACCAGAAAGGCAATTAAGGAAGTGACCAAGAAAAACATACCTGTATAGAGGTGAGCAATTACAACCAAAGAATCGATCCGACTGACCCAAATCGACCGAACCGATGGGTCAGTTTTAAAAGGGCATCAATCGGTGGTTGGTTTTTAAAGTTCATAACTGAGTAGTCAGTCGGTCGCACTAAACCCATGAAAACTAACTGACCGACCAACTTTTTAATACTAAAATATATATATGTTGTTGCGTCGGCCGCCTAGGGCTTTTACCCCTTTTCCTTTATCTTCTATTCGTGCCGCAAGATGTCCTCCCAACCCCCTCTCTCAATCTCTCATAGCAACCCTCTCTCTCACTCTCTCATCTTTCTCATAATCCCATCCTTTTGTTTGTGGCTTCATTGTTCATGGCTGAAATCCCATGGCTTTGTGCACAGCATCCCTTCGTCCCACTCGTGGCTTCATGCTCATGGCCAAATCGAATCGGAATCCCCTTCGTTCTCCTCTGCCTTTGTTCATGTTCGTAGTGTGGCTTGGTGTGGTCGTGCGTTGATTTCAAGATCCATCATTGTTCTTCTGCCTTCGATTTTGAGATCCATCACCATTCTTCTGCCTTTGATTTTGAGATCTCTCACTGTTTTTCTTCTTCCTTCTAATTAATTTTTTTATTTGAATTGATAAACGGACAAAGTAATAAAAGAATGAAAAGAAGGTTTCTATTTTTTGAAAACCGACCCCGACCGACCGATGATCACCCTAGCTGAAATGTCATTGAAATGAGACCAAACATGTACATGTCTCCAAGCCTTCTTTGGATCCTCATGGAGACTACCAAATGAGTCAATGACTGGATTAGTTTATCTAGCAACTCAGAAGGCTCACTCCTTGGTCCAGCAGCTCAAACATACTTGCCAAAAAGGCCAGTGTGGAAGAAGAGCTTTGGCTGTAACCACCATCAGAGATCAGACCTTAGTCTCCTCAGACCTTAGTCTCTTCATCCCAAAAACAGCTTCTATTTGAGAAAAGCTCGACCAACCATCATAGGTGGCTCATTGGTCCAAAAGGACTAGGTAAATTGAGAAGAAATGAGTTCAAACTCTATGATAGCTACCTACCTTAGAAACTAATTCCTATGTATTTTTCAGCACAGATAGCTGCCATAAATTTATATATATATATATATATATATAGCTCAACCTCCTCAATTTGGATATCTCCCTGGTACTTGGATGTGTTAGCGAGCCCACTGCCAGTGCAGCAAGATGACCTTTCATCTCGTAGTTAGAATCACTTCTCGCATTCGAGTAGGAAATTCAGGAGGTTGCCATTTGGCCAATTGATGGGCAAATCTTGCCAAGTCCACCAACCTTACAAATGATGAATCAAAACTATGTTCCCATATCCTTTAAACAGCAAAAAAGATCCAGAATCTTTAGAAATTAACGTGTCATTGTGTACATGTTGTATTGGGTCCCTGTTTCATGTCTATGTCCTGGCTTCTTGGGATATCAGAACTAACATCAAGGATTTCACACCTCTACAATATTTAGGTGAGAGAAAAGGAGGCAGGTAAGGGTATTCGTACCTTGTTTGCAAAAGAGAGGTGAAGGTGTGCCGTATACTGAACAGAAAGAATATATATGTCTATAAAACTGAATCAGTTTTTTAAAAAATGAATCAGGGTTGGTTTACAAGCATATTGAATTATGTTGGGATTTTTTTTTTATTATTATTATTTTTGTACTATCATGGGATGGCTTAGTGGTCAATAAGGGTCAATGCAAATAGCAAAGGACTTAGAGGGAATGGGTTCAAACCATGGTGGCCACATACCTAGGATTTAATATCCTACGAGTTACCTTGTCAACCAAATGTAGTAGGGTCAGGCAGTTGGCCCGTGATTAGTCGAGGTACGCGCAAGCTGGCCCGCACACACGGATATCAAAAAAAAAATGTTGGGATTTTTTGTTTCGTTTTTATACCTTTTACTTTTTATATTTTAAATTGCCCTTGTTCTACTTTATGATATAATTTTTTGTTGTATAACTACAGTGCCAAAAAATTGTTTGCAGTGGAACTTTTAATTTAATTGCAATTAATTGTTGAAAGACCCTTTTTCTGTCAAAGCTTATGTTCATGGTACTTGAAGTTGTTTATATGATAAATGACTCTCAGTTTAATTGGAAACAACTATTTAGTTATTACATGTTTTCCTCCACAAATTACGTTGTCTTATTCCTTTGGGGTGTGGTGAGTATTTTACTAATTTTTTCTTGTTTCCTTTGCACGCTCTGGAAATTCGTGGTCTCCATTTCTGCCAGGGAGTAAGTTCACATCCACTTATTGGCTCTCAAGACTATCTTAGTTTCTTTTCCTCTAAGGATTATATCTTTCTTTAAATATATGTTGGATAGAAGGTTGAAGTTGAAGTAATTTTTACAGCCTATATTTCATGATGGGACGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGATTTCAGTTTATTTTTAGAGATTCCAGGGTCAGATCTCTTTTCATGATTTTATTTTTAGTTGGAACTCAATAATGTTGCCCTTATGTAACTCATTGCCTACAAGTGAATTGTAAATGTTGAGTAGCCTAGCATGCTTAATTGATGTGAGCTATTCCATTCCCCCATTTACCCAGAAGACAAATATTAACTTTGTTTAGGCAATTGCAAATATTATGCAAATACTGACCAAGCCTCCGTACCTCTAGGACCAATATATTTACTGTTGCTTTTAATTCATCAATTTTTTATATGACATTTACTGTTAACTTTCTTAAATGTACATGCTATACGTCTTATATTCATTTTTATACTCAATTTCTAGTCTTGGGTCCTGTCATACACCAATTTGAAACATTCACAATTGTCCGCAACAATGCCCTTCACGTTCTGAAAAATGGGTGGTGTGAATTGAATTATTGTCTTAACTTTCTGCTTTTATGGCTTTTCATTTAGACCTAGGAAGATTTTTTGTGGTGTGTTCATTCTGCTTTTTGCTTGGATGACTGGTATAAAAGATTAAGAATTGATATGTTCTTCTACAAAGAATATATTTTGTTTTGCTAATCCTTCATTTCTGTAAAGTGTAAATCTATCCACATTTTATATCAGTGAGCATATCATTTATTTATAAGACTAAGATGGATGGTATGAATAAGCTTAGCTTGATCTTCAAAAGCCGTTTATCGTTGACCTTTTTGAATGAAGATGCAAGACCGGAAAACATACAACAGAAAGGCCAGCTTTGTCCAAGCCATCCACTGCTGTAAAGAAGCCAAGTCCGGCCCCTGTGTCTTCCATAACAAATACATTAGGGAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGACCATGGTAAGTTACTTTTCTTGAATTCTTTTCTGAGAGGGTATAGTTGTGGCTTAAATATTTCTATCATATGAAGTTGCAGCAACAGAATTTTGGAAGCGATTTTTATGGTTTTACTTTTGATGAAAAGAAGAAAAGTTGCTGTATTTATCAATTTTCGTGGAAAAATGGAGTAAATTGGATATGTTTAGATTCTTAAAATTTGTTAAGCTTGACCTAGCCGCGTTAATGGACCATCTGCACTGCAACAGCAAAAACTTGATTTCACCAACAATTTTCACTTCATCTTGCATTCTTTTAAACTGGAGCCCCTCTGTAACTCTGTTTGTTTCTTTTTGGTTTCCTTGTTAGCTCTTTTGGCTTCGTATGATTTTGATTTTCTCTTTTTGTATTGCCCTCGTTTTCATTCATTCTCAAGTAGTCTCTTTATTAAAAAGGAAAAAAAAAAAAACTGAACTTCAAATTCTTTAGTTGATTGGCTTCTTTTCTTTCAGTTTTATGGAGAGGAGTTTTCTGATGTCCTTGCTCCATTTGCTTTTTAATAGTTTTTACTATCTCATTGCATCCTGTTTGATTGTATGTCGCACAATTTTGCACCCGAGTATTGGAATACCTTTATTTTGTGTTACTTGTTTCACTGCAGTTCTTTCCAACTATTAATACTGTAATCTAATCCAAGTTTTGGTCTTAGGTTCACAAGTCAAAGGCGATAACAAATCTAGTAATGAAGCCTCAACTTTACCTGATGAAACCAACGCAGATTCTCAAGCCGCTCCTGCTCCAGCCAAAAAGATAATTGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAATTTCCATCCCGGTCCGCCTGTTTTTCACGACCGGTTGAGAGGGGTGAGATACATCTATTTACTTAAACTTTTTCATTATCACGGTGCTTCAAAATTATACACTGCCGAACATGATATTTATGTTTTTCTCCGCTATCCATTTGATTTTCAGTGGAAATGCTGTGACATTCATGTTAAGGAATTTGATGAGTTCATGGAAATTCAACCATGCACTCGCGGGTGGCACAATGCCGATCCAGCG ATGGAGCAACAGGTTGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCATGTTCACTGACGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGCCTATATTTCATGATGGGACGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGATTTCAGTTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACAGAAAGGCCAGCTTTGTCCAAGCCATCCACTGCTGTAAAGAAGCCAAGTCCGGCCCCTGTGTCTTCCATAACAAATACATTAGGGAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGACCATGGTTCACAAGTCAAAGGCGATAACAAATCTAGTAATGAAGCCTCAACTTTACCTGATGAAACCAACGCAGATTCTCAAGCCGCTCCTGCTCCAGCCAAAAAGATAATTGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAATTTCCATCCCGGTCCGCCTGTTTTTCACGACCGGTTGAGAGGGTGGAAATGCTGTGACATTCATGTTAAGGAATTTGATGAGTTCATGGAAATTCAACCATGCACTCGCGGGTGGCACAATGCCGATCCAGCG ATGGAGCAACAGGTTGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCATGTTCACTGACGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGCCTATATTTCATGATGGGACGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGATTTCAGTTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACAGAAAGGCCAGCTTTGTCCAAGCCATCCACTGCTGTAAAGAAGCCAAGTCCGGCCCCTGTGTCTTCCATAACAAATACATTAGGGAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGACCATGGTTCACAAGTCAAAGGCGATAACAAATCTAGTAATGAAGCCTCAACTTTACCTGATGAAACCAACGCAGATTCTCAAGCCGCTCCTGCTCCAGCCAAAAAGATAATTGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAATTTCCATCCCGGTCCGCCTGTTTTTCACGACCGGTTGAGAGGGTGGAAATGCTGTGACATTCATGTTAAGGAATTTGATGAGTTCATGGAAATTCAACCATGCACTCGCGGGTGGCACAATGCCGATCCAGCG MEQQVARVRCQRIGCNAMFTDDDNPEGSCQYHDSPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTERPALSKPSTAVKKPSPAPVSSITNTLGKESCARCRQGFFCSDHGSQVKGDNKSSNEASTLPDETNADSQAAPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACNFHPGPPVFHDRLRGWKCCDIHVKEFDEFMEIQPCTRGWHNADPA Homology
BLAST of MS017849 vs. NCBI nr
Match: XP_022159695.1 (cysteine and histidine-rich domain-containing protein RAR1 [Momordica charantia]) HSP 1 Score: 477.6 bits (1228), Expect = 5.7e-131 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of MS017849 vs. NCBI nr
Match: XP_022957825.1 (cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita moschata]) HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115 Identity = 190/223 (85.20%), Postives = 207/223 (92.83%), Query Frame = 0
BLAST of MS017849 vs. NCBI nr
Match: XP_023533462.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.9 bits (1091), Expect = 4.4e-115 Identity = 189/223 (84.75%), Postives = 208/223 (93.27%), Query Frame = 0
BLAST of MS017849 vs. NCBI nr
Match: XP_022995761.1 (cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita maxima]) HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114 Identity = 188/223 (84.30%), Postives = 204/223 (91.48%), Query Frame = 0
BLAST of MS017849 vs. NCBI nr
Match: XP_038891148.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Benincasa hispida] >XP_038891149.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Benincasa hispida]) HSP 1 Score: 417.2 bits (1071), Expect = 9.1e-113 Identity = 185/223 (82.96%), Postives = 206/223 (92.38%), Query Frame = 0
BLAST of MS017849 vs. ExPASy Swiss-Prot
Match: Q9SE33 (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana OX=3702 GN=RAR1 PE=1 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 4.9e-85 Identity = 144/217 (66.36%), Postives = 169/217 (77.88%), Query Frame = 0
BLAST of MS017849 vs. ExPASy Swiss-Prot
Match: Q6EPW7 (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAR1 PE=1 SV=2) HSP 1 Score: 305.8 bits (782), Expect = 3.9e-82 Identity = 142/221 (64.25%), Postives = 167/221 (75.57%), Query Frame = 0
BLAST of MS017849 vs. ExPASy Swiss-Prot
Match: Q6NUA0 (Cysteine and histidine-rich domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=chordc1 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.7e-27 Identity = 71/227 (31.28%), Postives = 101/227 (44.49%), Query Frame = 0
BLAST of MS017849 vs. ExPASy Swiss-Prot
Match: Q9UHD1 (Cysteine and histidine-rich domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CHORDC1 PE=1 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 8.8e-26 Identity = 71/229 (31.00%), Postives = 105/229 (45.85%), Query Frame = 0
BLAST of MS017849 vs. ExPASy Swiss-Prot
Match: Q9D1P4 (Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus OX=10090 GN=Chordc1 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 8.8e-26 Identity = 72/229 (31.44%), Postives = 107/229 (46.72%), Query Frame = 0
BLAST of MS017849 vs. ExPASy TrEMBL
Match: A0A6J1DZH1 (cysteine and histidine-rich domain-containing protein RAR1 OS=Momordica charantia OX=3673 GN=LOC111026036 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 2.8e-131 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of MS017849 vs. ExPASy TrEMBL
Match: A0A6J1H1M2 (cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita moschata OX=3662 GN=LOC111459249 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115 Identity = 190/223 (85.20%), Postives = 207/223 (92.83%), Query Frame = 0
BLAST of MS017849 vs. ExPASy TrEMBL
Match: A0A6J1K2T7 (cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita maxima OX=3661 GN=LOC111491197 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114 Identity = 188/223 (84.30%), Postives = 204/223 (91.48%), Query Frame = 0
BLAST of MS017849 vs. ExPASy TrEMBL
Match: A0A1R3ITL3 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09930 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93 Identity = 161/222 (72.52%), Postives = 180/222 (81.08%), Query Frame = 0
BLAST of MS017849 vs. ExPASy TrEMBL
Match: A0A2P5CG15 (CHORD domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_286340 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92 Identity = 155/217 (71.43%), Postives = 174/217 (80.18%), Query Frame = 0
BLAST of MS017849 vs. TAIR 10
Match: AT5G51700.1 (protein binding;zinc ion binding ) HSP 1 Score: 315.5 bits (807), Expect = 3.5e-86 Identity = 144/217 (66.36%), Postives = 169/217 (77.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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