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MS017835 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCACAGCGATACAATTCCTCTTCACCAATCCTCCCAGTCCGACATCGACGAGATCGAGAACCTCATCAACGCCAGCGTCCAATCCGGCCCCTCCACCGTTCTTCCAGCTCGCCCCCCGAGTCCTCCCCGGGCTTCAATTCCCGTTTCCTCCTCCCCCTTTATCCAATCCAATCTCCCCCCGCTTCCTCCCAAATCCACTATTCAGAAGCCCCCCACCGTCTTCCCTGCTCCGCCACCGCTCCCCGTCTCCGGCAATGGCAGGCCTGATATTTCATCCACCGGCTTCGGATCCGCGCCCAACACCCTGACGGAGCCCGTGTGGGATACCGTCAAGAGGGATCTCTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTTTTTCCAAACCCTTTCCGTGAGGACCCGGGAAAGGCTTTGAGGGATTGGGACCTCTGGGGTCCTTTCTTCTTCATTGTCTTCCTCGGTCTTACTCTTTCGTGGTCTGCGTCGGTCAAGAAGGTCAGGGTCTCTGTCTTTTATCTGATTAACTTAACGTACAAGTCTCAGGTTGTATCAGGCTTTTAGGTTGTTTTTGGTGTTCCCTATATTAGCCTGTTTTGACCCTGGGATGCTCGAGTTTTGGTTAAACTAGCTATCTGCAATTATTCAGAGCTGAACTCATTGTTGAAATTCAAGTGTAGCTTATCATTTGGACCTCAGAGTAGCTGGTAGCGGTAGATCGAGTGGCTGGAGTGATTTTGTTTAGATCTCTTGAATGCAGATGAAATATGGTTAGATGGTTTGAAGGACGCACACCATTATCTCTGTGCTTAATTATAGAGTGGATCTTCAGGAGAATGATTTCTGCATAGACAAAGCCTCAGAATCTACATTGCATTGTGATCTGTATGAGAAAATATCTAGAAGAAATAATGTAGTTATGGACTGTCAAGATTTCTATATCTCATAAATAGTCTAAGGCAGTAATATTTCTACTCTGATATCAAAAACAAATGGAAATTACATCGGTTTTTTACGACTTAGGGTGTACTTTCCCTGGGGCTTGTAGATTTACGACTTTGGGTACTAGGCCAAGGTATACTACTATATTTTAGTTATATCACCTCAGAGATCTTTATTATCCATCGAAGCTCTAGTTATTATGGTTATCGTGTTATTTTTCACATTATTTTGTTTTATCGAGTTGTTACTTGTTATTCACCGTTAACCCCTTCCCATGGTTTCTACCTGTAAAGCTAGGTTTGAATTCTTCATGCAGCCCTTGTCTCCTTTTGTTCTCAATGAAAGTTGCACTTCTCTTATGAAAACGTGTAATATGCCACTGGCTAGTAGTATTCACTACTTTGAACCTGAAATGCTCTGCTAAAAGTGGGCTTTTATCCATAAAATTCAATGGAATAGGGATAGTTTTATACCTGAAAATCAGTCTAGGGTCCGAAGAGAAGTGCAAGTTGTGGAAGTTTAAGATCTGCATGAAATTGCATCTATTCTTGTGGTTGTTAGACGTGGGACAAATTAATGTGTGGTAGGATACAAAAGAGATACCTGAGGATTTCAATCAAACCCAGCTAGTATGGATTATGTAAATGTTGGAAGAGTGCCGGAGATCATCTCTTTGTAAGTGTGATTTTCCCTAAAGAGCTTGGGTGCTATTCAATTGAATTGGTGTAGACGGCATGCATTGAAGGATTCTTGACAGCAGTTTTTGTTCTGGGAGATCCTTAAAGTGAATAAGAGAATATTTTGGAGGAATTTATGTGGTGCGGTATCTTAGGAGAGAAAGGTATACTAGAATTGAGGAGTTGTATAGAGACTTCTATTGATGCAAATAGAGTTTTTTTTTAAAACAAAAGGTGTAGAGGAATTGATGAGATGTATAGAGGCTTCTATTGATGCACATAGAGGTTTTTTTTTAAAAATGAGAAATTGAACTTTCCCTTGAGAAAAATGAAAAAAAGACATAGCACACTAGGCCATAAAAAAAAACCAAAGGAAGGAGACACACCTAAAGAAAGGGACTTCAATCCAAAAGGATAACATCTAGGTGATAATAATAATAATAATAATAATAAAAAAAAAATCCTTAGACACTGACCCCATAGGAAAGTATTAACACCTAGTTCGTAATGGATTTGACCTTAATATTTAATTTAAACGCCCTATATTGAAAACAAAAACTTGTAACTTGTCCTTATTTATGATGCACAATGCAGATGTATGATAAAATCTAAACATCCTTAACCATGTTCTGTTTATCTTCATGTTTGATGTTTTTCCCACTGTCATGTGCCCTTCATTTCTCATTCTCAATTTCTACTTTTGTATTGTCATTGATAAAATAAAGGCTTTTTAATTTTTTTGGTATGCTACTAATGATGTTAATTGATTTCCTCTTCAGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCGGCTGGTGCAGTGATTCTGACTTTGAATGTGCTTCTACTGGTAACTAAATCTCTCTTTCCCTCTTCTCACGGCTCCCTTCCCATTCTCCGTATTTGAGGACATGATTCATTTAATCATCACTTTTGTCTCTTAGAAAATAGAGTTGATGCTTATCCAATTTAGTACAGTGCTTCCTTTTTGCACTGTGTTCATTTGTAGGAGTGTAAGAGTTCGATCTAGTGTTTTCTGGTTTGTAGTAAAAAATCAATGCTGAAGCAACTATGTTTGCTTGAGAAAAGTTGAAATTGACCAAAACCCATTGTAACTGAAAATTGGACTGATCTCTTGACCACAACAATCATGATAGAATTTTTGTGTTTCTAAAACTGAACTTCAGAGATCTTGAGATGAGTTCTCTATGGCTCAAGGTAATTTTAAACAGATAAAGCAAACACCTGTCGGGTTAGTATATACTAATGTACTATAGCTCTACTAGAAATGGCTCTGGTTCCTAATTGCTAAATGTGAAAAGCTAATTGCTTTCTTAGTTCACATTGGTAATTGCAATGTTATTTTATGGACTCTTTGTTGTTGAAAGACTCATAACACTTGAAATTTGCTTGGCTTAAATAGTTTCCCTGTTTTTTTTTTCCCGTATTAGTTTGAGAAAGTGAAATATACTTTGCATTGACACCGTGAAAATGTTCAAATGAAACAGTATCAAAGAAAGAAACAGTAACTTAGAAATCTGAAACTAAACTTTGCCACATAGAAGACCTTTTCCCAAGCATGTTCCTTTTCATGGAAGATTCGGTGGTTTCTCTTCACTCATATTTCCCAAGCCAAAGACATAATTGCATTCTCCCGCAAAATCTTTGTTTTTTTCTTTCCTTTTGAATACTAACCACATTAACTATATAGCTTTTGAGGATAAGGCTAATTCAGTTGATTCTTTTTGTAATAGTATCCATATTAGGACATTTTGGTGATGACATAGGAACTAGAAATTCTTTTGTAACTACAGTCTCTCTCCAGATCTTACAGGATTGGAGAGTGTTTCTTTTTTAGTGTTCTTTTGGGGGAGGGACCTCTCATCCCTTGTCCATAGGCTGTTTTTTGTTCCTTTTTCAATGAATTGTTTCTTATGGTGCAAAAAAAATCTTTGGCTATTTCTTCAAAGATCCAACACTTGAAATTGATGTATAACTAAAGCCAACATTTCCGACTAAAAAAGCAATGGAAAACAAATGGTTCAACTCCTTTCACTCGTACATAACAGTCACCAACCTGGCTGAAGACTCATATTAGGACACTTCTTTTGAATCCTTTCCACTTAAGAAGCATGGATATGAACATGAGACACTGATATGGTACGACACGAACACATCGACACTTTATTTTCTAAAAATTTAGAACATGGACGCGTCAGGGACACGTGTTCGAATATGTGCCTATAACAATTGTTGAATTCATATTTACTTTGTACAACTAGTGTGTGACACAAGTCTTTTGCCCTAACAAGTGTTCGATACGTGTCCAATAAATGTCGGAATGTTGGGGTGTCCGACATGGACACGTTATCCAAATTGAAGTGTGCATGCTTCTTAGCTTTCCACTTTGTTTAAGCCTCCATGACATGTAGTACATACAATAGTCCATACAAAAAAATTAATACCTTGCATTTCCATTTCTTCAAAGCCAAATTTTTTTTGTAACAACTTATCACTTTTTTTTTATAAGAAACACAATATATTGATGAAAAAAAGGGAAAAGCAGCCTAAGGGCAAGGGCCAAGAAAGCCCTCCCATAAACTAGCGCATTATAGCTTTCCAGTCTTGAGAAATTAACGCCATGCTGTAATTGAAAAGAATTTCTTATGAATAAGGCACCAAAGAATTTCTTATGAATAAGGCACCAAGAGGCCGTATTCATTTTTACATTTTCACAAAAATATATCAAAAGGGTGAGAGGAATTGTTGAAAATTCTTTGGTTCCTTGCGAGTGGAAGCACCTTTCACCTCTCACATTCTTTAAGTAAAAGAACAAAGATTTGACCAAGAAGATAACCTTATGAGTGTAAGCACCACCATCTTCTATCTTCCCTTGGAAGTTGGATAAATACAATCCCTTTTAAGAAGCTGAAGCAATTGTCGGAACTCCTCCTCTAATTTCTGTTGAAGTATTTCTTAACACAAAATCTAATTGACTATATTCTCATCCCAAACATCTTTCACCATCACCTCTTTTTCTTGAACTGTGAAAATTCTAGGAAAGGAGTACACAAGCGATTGCAACGTTTTCTTCCCATTTCCAACTCTTATTGATAAATGATTCAAGCTTTGAAATAGCCTTCCACGGGCTAGGAAAGCTTTCTGGTTTTCTTTATTTAGTGAAGTAACCAGAATTATCCTTATTACAGATATAGATATTTAAAATTTCCAAAGTTATCCTTCTTTGCCCATTTTATAAGCGAAGCCTAATTATTTCTCTTCAAATCCTCTTCACCAAGGCCATGTTTTGCTGAAGGTGATGACAAACTGGAAAACCTTTTTGTAATTATGAGTGCTCATCTTTTGTAAACTCATTCAACATACCCATTACCCACCCTCTCACCTTGAATCACCGGCTTAAGATATCACCCACAACACAAAAAGGAAAGAAACAAAATGGATCCCTTGCTTAAGCCCCCTAGAAGTCTCCACACCCTTCCTCTAAATTTCCCATCGAAGAAAATAGAAATTTATCTTTCTCATGCCAATTACATGTATCTATATTCATTTGCTTATGGGGGAATCTTCTCCATATATTTTTATCTCAGGTCTTCTTCCCTTGCTCTGTGAAAATTCCATCCATTTCTCCTTTGTGGCAGTTGTTAAAAGGAAAAGCTCTAACTTTGTGGGAAACGTTGTTAGTGCTATTTTTAGTCTTGTTTGCGGGGAAACAAATAATTAAGTTATCTTAATTGAGATTAGACGTAGGGAAACCCTTTTACTTTTGTGTGCTTTCATCTCACTGAAACTTTCGTATTTTTTTGCCTCACTCTCAAGTATTATAGGAGGACTATTGTGCCACAATAAACACTCCGTAAGTTGGTAATGGGTGCTCTATCAGTTTCCTAGAAGTTGGTGTATGAAGTGTCTTTGTGTGGTTAACCCCTGTTTAATGAGCTTTTATTCCTACGAATAGAAACCTTACACCCCTAGTCATCATGTTAGTAGCATTTTATTAAAGAAAAACAAAATAGAATAACTGGGGACCTTACATTCACTACTGCAGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTTTTGGGATACTGTCTGTTCCCTCTGGATATCGGAGCATTGATCTGCATGTTGAAGGACAACGTAATAGTGAAAATAATAGTGGTATGTGTGACCTTGGCTTGGAGTTCTTGGGCTGCATACCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCTGTGTTCCTTATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGAT ATGTCGCACAGCGATACAATTCCTCTTCACCAATCCTCCCAGTCCGACATCGACGAGATCGAGAACCTCATCAACGCCAGCGTCCAATCCGGCCCCTCCACCGTTCTTCCAGCTCGCCCCCCGAGTCCTCCCCGGGCTTCAATTCCCGTTTCCTCCTCCCCCTTTATCCAATCCAATCTCCCCCCGCTTCCTCCCAAATCCACTATTCAGAAGCCCCCCACCGTCTTCCCTGCTCCGCCACCGCTCCCCGTCTCCGGCAATGGCAGGCCTGATATTTCATCCACCGGCTTCGGATCCGCGCCCAACACCCTGACGGAGCCCGTGTGGGATACCGTCAAGAGGGATCTCTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTTTTTCCAAACCCTTTCCGTGAGGACCCGGGAAAGGCTTTGAGGGATTGGGACCTCTGGGGTCCTTTCTTCTTCATTGTCTTCCTCGGTCTTACTCTTTCGTGGTCTGCGTCGGTCAAGAAGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCGGCTGGTGCAGTGATTCTGACTTTGAATGTGCTTCTACTGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTTTTGGGATACTGTCTGTTCCCTCTGGATATCGGAGCATTGATCTGCATGTTGAAGGACAACGTAATAGTGAAAATAATAGTGGTATGTGTGACCTTGGCTTGGAGTTCTTGGGCTGCATACCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCTGTGTTCCTTATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGAT ATGTCGCACAGCGATACAATTCCTCTTCACCAATCCTCCCAGTCCGACATCGACGAGATCGAGAACCTCATCAACGCCAGCGTCCAATCCGGCCCCTCCACCGTTCTTCCAGCTCGCCCCCCGAGTCCTCCCCGGGCTTCAATTCCCGTTTCCTCCTCCCCCTTTATCCAATCCAATCTCCCCCCGCTTCCTCCCAAATCCACTATTCAGAAGCCCCCCACCGTCTTCCCTGCTCCGCCACCGCTCCCCGTCTCCGGCAATGGCAGGCCTGATATTTCATCCACCGGCTTCGGATCCGCGCCCAACACCCTGACGGAGCCCGTGTGGGATACCGTCAAGAGGGATCTCTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTTTTTCCAAACCCTTTCCGTGAGGACCCGGGAAAGGCTTTGAGGGATTGGGACCTCTGGGGTCCTTTCTTCTTCATTGTCTTCCTCGGTCTTACTCTTTCGTGGTCTGCGTCGGTCAAGAAGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCGGCTGGTGCAGTGATTCTGACTTTGAATGTGCTTCTACTGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTTTTGGGATACTGTCTGTTCCCTCTGGATATCGGAGCATTGATCTGCATGTTGAAGGACAACGTAATAGTGAAAATAATAGTGGTATGTGTGACCTTGGCTTGGAGTTCTTGGGCTGCATACCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAGGCTCTTGCACTCTATCCTGTGTTCCTTATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGAT MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFIQSNLPPLPPKSTIQKPPTVFPAPPPLPVSGNGRPDISSTGFGSAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIIVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID Homology
BLAST of MS017835 vs. NCBI nr
Match: XP_022159810.1 (protein YIPF6 homolog [Momordica charantia]) HSP 1 Score: 529.3 bits (1362), Expect = 2.1e-146 Identity = 276/278 (99.28%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of MS017835 vs. NCBI nr
Match: XP_004143629.1 (protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical protein Csa_000333 [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144 Identity = 269/278 (96.76%), Postives = 276/278 (99.28%), Query Frame = 0
BLAST of MS017835 vs. NCBI nr
Match: XP_008467227.1 (PREDICTED: protein YIPF6 homolog [Cucumis melo] >TYK00296.1 protein YIPF6-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 520.8 bits (1340), Expect = 7.4e-144 Identity = 269/278 (96.76%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of MS017835 vs. NCBI nr
Match: XP_038876122.1 (protein YIPF6 homolog [Benincasa hispida]) HSP 1 Score: 515.0 bits (1325), Expect = 4.0e-142 Identity = 267/278 (96.04%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of MS017835 vs. NCBI nr
Match: XP_022995736.1 (protein YIPF6 homolog [Cucurbita maxima]) HSP 1 Score: 509.6 bits (1311), Expect = 1.7e-140 Identity = 265/278 (95.32%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of MS017835 vs. ExPASy Swiss-Prot
Match: Q93VH1 (Protein YIP4b OS=Arabidopsis thaliana OX=3702 GN=YIP4B PE=1 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 8.5e-127 Identity = 240/280 (85.71%), Postives = 257/280 (91.79%), Query Frame = 0
BLAST of MS017835 vs. ExPASy Swiss-Prot
Match: O64614 (Protein YIP4a OS=Arabidopsis thaliana OX=3702 GN=YIP4A PE=1 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 7.4e-123 Identity = 238/282 (84.40%), Postives = 250/282 (88.65%), Query Frame = 0
BLAST of MS017835 vs. ExPASy Swiss-Prot
Match: Q54RZ2 (Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 76/177 (42.94%), Postives = 109/177 (61.58%), Query Frame = 0
BLAST of MS017835 vs. ExPASy Swiss-Prot
Match: Q28CH8 (Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 79/207 (38.16%), Postives = 118/207 (57.00%), Query Frame = 0
BLAST of MS017835 vs. ExPASy Swiss-Prot
Match: Q6IQ85 (Protein YIPF6 OS=Danio rerio OX=7955 GN=yipf6 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.6e-27 Identity = 75/204 (36.76%), Postives = 115/204 (56.37%), Query Frame = 0
BLAST of MS017835 vs. ExPASy TrEMBL
Match: A0A6J1DZT8 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111026118 PE=3 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 1.0e-146 Identity = 276/278 (99.28%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of MS017835 vs. ExPASy TrEMBL
Match: A0A0A0KL60 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 7.2e-145 Identity = 269/278 (96.76%), Postives = 276/278 (99.28%), Query Frame = 0
BLAST of MS017835 vs. ExPASy TrEMBL
Match: A0A5D3BPX9 (Protein YIP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00400 PE=3 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144 Identity = 269/278 (96.76%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of MS017835 vs. ExPASy TrEMBL
Match: A0A1S3CT87 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144 Identity = 269/278 (96.76%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of MS017835 vs. ExPASy TrEMBL
Match: A0A6J1K2R2 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111491180 PE=3 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 8.2e-141 Identity = 265/278 (95.32%), Postives = 270/278 (97.12%), Query Frame = 0
BLAST of MS017835 vs. TAIR 10
Match: AT4G30260.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 454.5 bits (1168), Expect = 6.0e-128 Identity = 240/280 (85.71%), Postives = 257/280 (91.79%), Query Frame = 0
BLAST of MS017835 vs. TAIR 10
Match: AT2G18840.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 441.4 bits (1134), Expect = 5.3e-124 Identity = 238/282 (84.40%), Postives = 250/282 (88.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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