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MS017827 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCCAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGGTTAGGTCTCTTCAAACTATAATTACCCTCGTTTCTGTAAATAACCCTATGGACTTATGCCTCGTGATTATGGCGTTTCAGCACGTTTCTTAGTCCAGAAGATTCCGGATGTTCTTGCTATTAGGAGGCCATCCGGTGTTAGGGTTTTTTAACTTTTCGACTGAAATTTTTTTATCCGTTTAATTTTGTTCAGACTTATGCTTTGTGAATATGATTGATTAAGCACGTTTCAGTCGGGAAGTTCTTGGGTGTCAAATTCAGTTCAATACTTGAATTAAGGACATACATTGTTTGGTTTTATTGATCTTTCGCCTGTGGAATGCTATCCAATTAATATGTTTAGACTTATGCCTTGTGATTATGAAGGATTATGCACGTTCCACTCAAGAAGTTGTTGGGTATCAATTATGAAATAGTTGAATTAAGTACATCAATAGTTTGGATTTCTTAATCTTTCGACTGTAAAATAACTCCAAGTAATATGTTTATGCTTATGCCTTGTGATTATGAAGGATTAAGCACGTTGCACTCGAGAAGATGTTGGGTATCAATTACAATATAGTTCTTCAATAGTTGGATTAAGGGCTTCAAATTTTTAGATTTATTTAACTTTTTACTGTGTACTGATGTGTTTGGATGCTTTATATGGCTATACTATTGGGATGTTTGTAAACACACATACTTTTTGCTTCATCAATTTTTATAACTGCAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT GCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCCAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT GCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCCAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCAAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT ATSARGGMKDFYKQTKKGGISKPKPKPSSRKTKSPANAAASASDAVHPPALVSSLVCFILNFVLDDYSESENMLRQFDMNSAYGPCLGMTRMERWERARKFGLNPPKDIETLLKAGKVQLECLWDGRV Homology
BLAST of MS017827 vs. NCBI nr
Match: XP_022156193.1 (DNA polymerase delta subunit 4 [Momordica charantia]) HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57 Identity = 118/128 (92.19%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of MS017827 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.3e-39 Identity = 95/129 (73.64%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of MS017827 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38 Identity = 94/129 (72.87%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of MS017827 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata]) HSP 1 Score: 167.9 bits (424), Expect = 5.6e-38 Identity = 91/128 (71.09%), Postives = 98/128 (76.56%), Query Frame = 0
BLAST of MS017827 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167.9 bits (424), Expect = 5.6e-38 Identity = 91/128 (71.09%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of MS017827 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.6e-09 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of MS017827 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of MS017827 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS017827 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-08 Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MS017827 vs. ExPASy TrEMBL
Match: A0A6J1DPY8 (DNA polymerase delta subunit 4 OS=Momordica charantia OX=3673 GN=LOC111023139 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 8.9e-58 Identity = 118/128 (92.19%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of MS017827 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 95/129 (73.64%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of MS017827 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 95/129 (73.64%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of MS017827 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 5.4e-39 Identity = 94/129 (72.87%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of MS017827 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38 Identity = 91/128 (71.09%), Postives = 98/128 (76.56%), Query Frame = 0
BLAST of MS017827 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 ) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31 Identity = 77/131 (58.78%), Postives = 91/131 (69.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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