Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACTTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTGTGGCTTCAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
mRNA sequence
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACTTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTGTGGCTTCAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
Coding sequence (CDS)
ATGCCAAAAACATTCTCAATTCTCCACAAGAAACTTGAAGAACTCGAACTTCAACTCCACCATGCCCTCTCCCAAACTCCAACTTCAACTCTCTCCCAAGAAATCCAACAGAAGTTTGTTTTCATGGCCAATCTCCTCTCCGCCGAGGCCGCCTCCTGCCCGACCGAGCCTCGACATTTGAGCCACATTGCCCGCCGCCTCTCGCAACTCGAAGCCGCCTTCCGAGACTTGGGGGAGGGGGAGGACTACTTTCTCGACCATGTCGACGATTCGTCTGCTTGCTCGTGCACCGAGTCATGCCTAAACGACGAGAACGAAAACGAGGACGAGGACGAGGCAAAGAGTTGTTTGGAAGGGGATGATGGAGATGGTGGGGAGTTTTATGAGTGTGTGGTGGAAGAGAAGGAAGATGAAAAAGAGAGGAGAGAAATTGTGGGAATTGGAAAGCTAATTATTTGTGGAGCCATGGCCAGTGGGTTTCTCATTGGTGTGGCTTCAATGGGTGTTGCTGTTTTCATTCAGTTTTCTGGTTATCTTCAACTTCAACACAATGGAGGTTTTGTTACTCCAACT
Protein sequence
MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEDEAKSCLEGDDGDGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGVASMGVAVFIQFSGYLQLQHNGGFVTPT
Homology
BLAST of MS017807 vs. NCBI nr
Match:
KAA0037648.1 (hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa])
HSP 1 Score: 184.1 bits (466), Expect = 1.1e-42
Identity = 121/198 (61.11%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QKF+F+ANLLSAE ASCPTE P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEDEAKS 120
R L H+ARRL+QLEA F D D HV+DSS C CTESCLND++E S
Sbjct: 61 RRLRHMARRLAQLEAGF----WSPDMLADNGHVNDSSTCWCTESCLNDDSE---VVSGSS 120
Query: 121 CLEGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGVASMGVAVF-I 180
CLE D+ +GGE FYECV EKE EKE R+IVG+GKL GAMASGF+IG+ MGVAVF I
Sbjct: 121 CLE-DEMEGGECFYECVEGEKE-EKEERKIVGVGKL--NGAMASGFVIGMVLMGVAVFSI 180
Query: 181 QFSGYLQLQHNGGFVTPT 192
+F GY Q+Q NGGFV PT
Sbjct: 181 EFFGYFQVQQNGGFVIPT 187
BLAST of MS017807 vs. NCBI nr
Match:
KGN51765.2 (hypothetical protein Csa_009074, partial [Cucumis sativus])
HSP 1 Score: 158.3 bits (399), Expect = 6.6e-35
Identity = 109/189 (57.67%), Postives = 130/189 (68.78%), Query Frame = 0
Query: 10 KKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EPRHLSHIARR 69
KKL+ELELQL H+ L+ +LSQE QK +F+ANLL+AE ASCP+ +PR L H+ARR
Sbjct: 1 KKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKPRRLKHMARR 60
Query: 70 LSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEDEAKSCLEGDDGDG 129
L+QLEA F DL + VDDS+ C CTESCLND++E SCLE D+ +G
Sbjct: 61 LAQLEAVFWSPDLVDN-----GQVDDSTTCLCTESCLNDDSE---VVSGSSCLE-DEMEG 120
Query: 130 GE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGVASMGVA-VFIQFSGYLQLQ 189
GE FYECV EKE EKE R+IVG+ KL GAM SGF+IGV SMGVA FI+ GY Q Q
Sbjct: 121 GECFYECVEGEKE-EKEERKIVGVVKL--NGAMVSGFVIGVVSMGVANFFIELFGYFQHQ 177
Query: 190 HNGGFVTPT 192
NGGFV PT
Sbjct: 181 QNGGFVIPT 177
BLAST of MS017807 vs. NCBI nr
Match:
KAG6605709.1 (Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 156.8 bits (395), Expect = 1.9e-34
Identity = 99/164 (60.37%), Postives = 120/164 (73.17%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTEPRHL 60
M KT++IL KKLEELE Q+ + + S L Q+I QK++F+ANLLSAE ASCP++PRHL
Sbjct: 1 MTKTYAILRKKLEELERQVQLSRNNVHPSLL-QDIHQKWLFIANLLSAEVASCPSKPRHL 60
Query: 61 SHIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEDEAKSCLEGD 120
HIARRL+QLE AFR+ + ED +DHVDD S CSCTESCLND D D A SCL+ D
Sbjct: 61 KHIARRLAQLEPAFRNC-KAED-LVDHVDDVSTCSCTESCLND-----DGDVASSCLD-D 120
Query: 121 DGDGGEFYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGV 165
+ +GGEFYECV EKE EKE R++V +G L GAMASG LI V
Sbjct: 121 EKEGGEFYECVENEKE-EKEERKMVRVGTL--WGAMASGCLIVV 152
BLAST of MS017807 vs. NCBI nr
Match:
GAV87896.1 (hypothetical protein CFOL_v3_31320 [Cephalotus follicularis])
HSP 1 Score: 115.5 bits (288), Expect = 4.9e-22
Identity = 80/210 (38.10%), Postives = 120/210 (57.14%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
M K ++IL +KL+ELE +L A+S Q T +Q+I+Q FVF+ NLLSAE A P++P
Sbjct: 1 MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYF-LDHVDDSSACSCTESCLNDENENEDEDEAKSC 120
RHL+H+ RL++LE +F + DH++ S CSCTESCLND+ E S
Sbjct: 61 RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-------ASA 120
Query: 121 LEGDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFL 180
+ G G + E Y C+ +++ ++E ++++ +G CG MASG +
Sbjct: 121 VSGSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVG--TYCGVMASGVV 180
Query: 181 IGVASMGVAVFIQFSGYLQLQHNGGFVTPT 192
+GVA MG+ V ++FSG G F+TPT
Sbjct: 181 VGVALMGL-VMVKFSGCFHYVEYGSFMTPT 200
BLAST of MS017807 vs. NCBI nr
Match:
KAE8022375.1 (hypothetical protein FH972_008178 [Carpinus fangiana])
HSP 1 Score: 114.8 bits (286), Expect = 8.4e-22
Identity = 87/218 (39.91%), Postives = 120/218 (55.05%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
M K +SIL +KL+ LE +L S T+ SQ +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1 MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60
Query: 61 PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDD--SSACSCTESCLNDENENEDEDEAK 120
P HL HI +RL+QLE FR + L+H DD S CSCTESCLND+ E E++ +
Sbjct: 61 PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120
Query: 121 SCLEG---DDGDGGEF---------------YECVVEEKEDEK---ERREIVGIGKLIIC 180
G D EF ++ +VEEK +++ E+R VG+G C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180
Query: 181 GAMASGFLIGVASMGVAVFIQFSGYLQLQHNGGFVTPT 192
GAMA G ++G+A MG V ++FSG F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215
BLAST of MS017807 vs. ExPASy TrEMBL
Match:
A0A5A7T4C4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G003110 PE=4 SV=1)
HSP 1 Score: 184.1 bits (466), Expect = 5.4e-43
Identity = 121/198 (61.11%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPTE--P 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QKF+F+ANLLSAE ASCPTE P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKFLFVANLLSAEIASCPTELMP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYFLD--HVDDSSACSCTESCLNDENENEDEDEAKS 120
R L H+ARRL+QLEA F D D HV+DSS C CTESCLND++E S
Sbjct: 61 RRLRHMARRLAQLEAGF----WSPDMLADNGHVNDSSTCWCTESCLNDDSE---VVSGSS 120
Query: 121 CLEGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGVASMGVAVF-I 180
CLE D+ +GGE FYECV EKE EKE R+IVG+GKL GAMASGF+IG+ MGVAVF I
Sbjct: 121 CLE-DEMEGGECFYECVEGEKE-EKEERKIVGVGKL--NGAMASGFVIGMVLMGVAVFSI 180
Query: 181 QFSGYLQLQHNGGFVTPT 192
+F GY Q+Q NGGFV PT
Sbjct: 181 EFFGYFQVQQNGGFVIPT 187
BLAST of MS017807 vs. ExPASy TrEMBL
Match:
A0A0A0KUA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 114/198 (57.58%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQL-HHALSQTPTSTLSQEIQQKFVFMANLLSAEAASCPT--EP 60
M KT++IL KKL+ELELQL H+ L+ +LSQE QK +F+ANLL+AE ASCP+ +P
Sbjct: 1 MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60
Query: 61 RHLSHIARRLSQLEAAF--RDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEDEAKS 120
R L H+ARRL+QLEA F DL + VDDS+ C CTESCLND++E S
Sbjct: 61 RRLKHMARRLAQLEAVFWSPDLVDN-----GQVDDSTTCLCTESCLNDDSE---VVSGSS 120
Query: 121 CLEGDDGDGGE-FYECVVEEKEDEKERREIVGIGKLIICGAMASGFLIGVASMGVA-VFI 180
CLE D+ +GGE FYECV EKE EKE R+IVG+ KL GAM SGF+IGV SMGVA FI
Sbjct: 121 CLE-DEMEGGECFYECVEGEKE-EKEERKIVGVVKL--NGAMVSGFVIGVVSMGVANFFI 180
Query: 181 QFSGYLQLQHNGGFVTPT 192
+ GY Q Q NGGFV PT
Sbjct: 181 ELFGYFQHQQNGGFVIPT 186
BLAST of MS017807 vs. ExPASy TrEMBL
Match:
A0A1Q3D5V2 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22
Identity = 80/210 (38.10%), Postives = 120/210 (57.14%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALS---QTPTSTLSQEIQQKFVFMANLLSAEAASCPTEP 60
M K ++IL +KL+ELE +L A+S Q T +Q+I+Q FVF+ NLLSAE A P++P
Sbjct: 1 MTKNYTILRRKLQELETKLDEAVSLPQQEHTQFDAQDIEQSFVFLKNLLSAEIALHPSKP 60
Query: 61 RHLSHIARRLSQLEAAFRDLGEGEDYF-LDHVDDSSACSCTESCLNDENENEDEDEAKSC 120
RHL+H+ RL++LE +F + DH++ S CSCTESCLND+ E S
Sbjct: 61 RHLNHMDNRLTELETSFHKWVTSKTLTDDDHIETVSTCSCTESCLNDDGE-------ASA 120
Query: 121 LEGDDG-DGGEFY--------------ECVVEEKEDEKERREIVGIGKLIICGAMASGFL 180
+ G G + E Y C+ +++ ++E ++++ +G CG MASG +
Sbjct: 121 VSGSLGFEETEMYLEDLHVEEKLPMEMVCLEAKRDVKREEKKVMLVG--TYCGVMASGVV 180
Query: 181 IGVASMGVAVFIQFSGYLQLQHNGGFVTPT 192
+GVA MG+ V ++FSG G F+TPT
Sbjct: 181 VGVALMGL-VMVKFSGCFHYVEYGSFMTPT 200
BLAST of MS017807 vs. ExPASy TrEMBL
Match:
A0A5N6R0N0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 4.0e-22
Identity = 87/218 (39.91%), Postives = 120/218 (55.05%), Query Frame = 0
Query: 1 MPKTFSILHKKLEELELQLHHALSQTPTSTLSQ----EIQQKFVFMANLLSAEAASCPTE 60
M K +SIL +KL+ LE +L S T+ SQ +I+Q+FVF+ NLLSAE AS P++
Sbjct: 1 MTKRYSILQRKLQGLESELSQRFSLPATTACSQLLLEDIEQRFVFLNNLLSAEVASHPSK 60
Query: 61 PRHLSHIARRLSQLEAAFRDLGEGEDYFLDHVDD--SSACSCTESCLNDENENEDEDEAK 120
P HL HI +RL+QLE FR + L+H DD S CSCTESCLND+ E E++ +
Sbjct: 61 PHHLHHIEQRLAQLEHDFRTWRSFKTSLLNHEDDGNGSRCSCTESCLNDDGEASAEEDTE 120
Query: 121 SCLEG---DDGDGGEF---------------YECVVEEKEDEK---ERREIVGIGKLIIC 180
G D EF ++ +VEEK +++ E+R VG+G C
Sbjct: 121 RFSHGLVVGDRALVEFSRGLNKEKALLQAGCFDSLVEEKAEQERKGEQRRPVGVGSW--C 180
Query: 181 GAMASGFLIGVASMGVAVFIQFSGYLQLQHNGGFVTPT 192
GAMA G ++G+A MG V ++FSG F+T T
Sbjct: 181 GAMAVGVVLGMALMGF-VMVRFSGCFHYADPRSFLTST 215
BLAST of MS017807 vs. ExPASy TrEMBL
Match:
A0A7J7CAC6 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20
Identity = 83/196 (42.35%), Postives = 109/196 (55.61%), Query Frame = 0
Query: 6 SILHKKLEELELQLHHALSQTPTS----TLSQEIQQKFVFMANLLSAEAASCPTEPRHLS 65
SIL KKL+ LE +L+ ALS P S S++I+Q+F F+ LLSAE AS P HL
Sbjct: 7 SILQKKLQRLESKLNEALSLPPDSPHHDRYSRDIEQRFAFLKTLLSAELASQPANSHHLQ 66
Query: 66 HIARRLSQLEAAFRDLGEGEDYFLDHVDDSSACSCTESCLNDENENEDEDEAKSCLEGDD 125
HI R L++LEAA+ D + LDH+D +S CSCTESC ND+ E + + EG D
Sbjct: 67 HIERTLNELEAAYHDWNNFKTSTLDHIDTASTCSCTESCFNDD---EGDGQVDVGSEGFD 126
Query: 126 GDGGEFYECVVEEK----EDEKERREIVGIGKLIICGAMASGFLIGVASMGVAVFIQFSG 185
DG + E EE+ E KE EI C M SG +IG+ MG V ++FSG
Sbjct: 127 -DGEKIVEGQSEERAVGVEIVKEEEEIRVWTWKSYCRNMVSGMVIGMVLMG-GVMVRFSG 186
Query: 186 YL--QLQHNGGFVTPT 192
+++N FV PT
Sbjct: 187 CFNNSVEYN-SFVAPT 196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0037648.1 | 1.1e-42 | 61.11 | hypothetical protein E6C27_scaffold277G003110 [Cucumis melo var. makuwa] | [more] |
KGN51765.2 | 6.6e-35 | 57.67 | hypothetical protein Csa_009074, partial [Cucumis sativus] | [more] |
KAG6605709.1 | 1.9e-34 | 60.37 | Cysteine and histidine-rich domain-containing protein RAR1, partial [Cucurbita a... | [more] |
GAV87896.1 | 4.9e-22 | 38.10 | hypothetical protein CFOL_v3_31320 [Cephalotus follicularis] | [more] |
KAE8022375.1 | 8.4e-22 | 39.91 | hypothetical protein FH972_008178 [Carpinus fangiana] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T4C4 | 5.4e-43 | 61.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0KUA1 | 3.1e-38 | 57.58 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517140 PE=4 SV=1 | [more] |
A0A1Q3D5V2 | 2.4e-22 | 38.10 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31320 PE=4... | [more] |
A0A5N6R0N0 | 4.0e-22 | 39.91 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008178 PE=4 SV=1 | [more] |
A0A7J7CAC6 | 2.9e-20 | 42.35 | Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00673 ... | [more] |
Match Name | E-value | Identity | Description | |