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MS017786 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATACTGTGCTGGCAAAAGTTGCGACAGAGAAGAGGATGTCACTGATCAAGGCTTGGGAGGAAAGTGAAAAGTCAAAGGCTGAGAACAAGTAAGATTCTGTTCGGCTTTTTCTTCTATTCAAATTTCACACCATTTTAAAATTCTATTTTCATTCTTTTCCTTAATGACATTTTTCTACTCTTTTTGGTTTCTATCTTTTGAAACTGTAAATATTTTGTTTCGAAACATTTTGTTCAAATCTTACCCATTTAAAACAAAAATATATATATATATATATATATAGAAAAAACACTTTGTTTGTGAAGTCTTCAAACTTTAAAAGTAGCTTCTGAAATGTATATGTTTGAAGTTTGAAGTTTGGTTAAGATTCAAAAGTAGTTTTAAAGTTAAAAAAATAAAAAATAAAACAGAGAAATTGTCAGCAATAAATTTAAGCCCCATTGATAAGGATTTCATTTCTAATTTTGTAATTTTAGAAATTATAGTTTTTTAGAACTTTTTTTTTTTCCCTCTGTTGTATGCCATAAAGCTGATGTTTATCTTATATTGCGTTTTGCTTTAAAGCTTGCAATATGCTTTCTAAAATACTTTCCAACTTTTTCCAAAATATTTTCTAAAACCGTATGTTCGTAAAGATATAGTCCATTGTGCTATTGGCTGTCTCGTTTTGAGTTACGTTTTCTAAAACCGTTTTTCGTAAACGTGGGAAGGTTGCAATATAGTCCATTGTGCTATGGGCAGTCTCATTTTGAGTTTGCTTATTTGCTTGTGGGTGGAAGCAAGTGCCTCAAAAAATTATTCTACGAGCCTAATCAGAGTGCAATTGTGACGGTTGAAATTTTTTTTTTAATACTTAAAATTTAGCTTAGATTTTGAAAACATAGTGTTCTCAAACTAGGGCATTAATTTTTCAAAGAATAAAAACTAAGAACAAATTCTACTGCCACACCTAATATGAGAATATCCTAGCTGTATGATGATGGTTGGTGATAGTTGAACTCAGTTGATTTCAATTACTCATCATTGAGAGTTCAAAATTTCCCAACCCCACTTGTAAATTTGTAAAGAAAAAGAAAAATCTCATGTAGTTTTTCATAAAGTATTTAGTTTTAGAGGTTAAAAGTGACTTTTGAGCATGTGTTAATTTGTTTTGCAACTGAAACTCCTTGAGCAGAGCACACAAAAAGCTATCTTCTGTTGTGGCATGGGAGAATAGCAAGAAAGCATCTGTTGAGGCTGAGTTAAAGAAGATTGAGGTATCAAATCTTCATATTACTTTAATATTGTCCACTTTGAGTTTAATCAGATACGTATTTATCTTTGGGCTCCATTCAAACTAGCTCGAATGAATGATGCTTATAAATAAACTCGTGATTTTCCTCATCCCTTATGATATAAAGCTTAGTGAACTATTTATTCCATTTTTATTATCGTCTTGATAACTTTTACTGTTCTGGTTGCATCTGGATCAAGGAATTTAGTAATTGAGGGGAGAAATCGAACCATCAACCTTAGGGATTGTAATACATGCCTTATCCACTTGAGCTATGCTCGGATGGCCTAGACCCAAGAATTATATCTTTGTAGATATGTCAATATTTCTATATATTCAAGATTTTGACCTCAATAATGAGAGGTTAATCGATATTTTCATGAAATATGGGGATATTTTGGTGGAAGCAGAGAATTATAGATATGGCTGATTAGTAGTCTGGGAGTGCTCTTGTTTTGATAGTAAACAAACTTTTGAGCAGGAAAGTTTGGAGAAGAAGAAGGCTGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAAACAGCAGAGGAGAAGAGGGCAATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCTGCCAAGTACCGTGCCACCGGTACCGCCCCGAAGAAGCTTCTCGGCTGCTTC GATACTGTGCTGGCAAAAGTTGCGACAGAGAAGAGGATGTCACTGATCAAGGCTTGGGAGGAAAGTGAAAAGTCAAAGGCTGAGAACAAAGCACACAAAAAGCTATCTTCTGTTGTGGCATGGGAGAATAGCAAGAAAGCATCTGTTGAGGCTGAGTTAAAGAAGATTGAGGAAAGTTTGGAGAAGAAGAAGGCTGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAAACAGCAGAGGAGAAGAGGGCAATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCTGCCAAGTACCGTGCCACCGGTACCGCCCCGAAGAAGCTTCTCGGCTGCTTC GATACTGTGCTGGCAAAAGTTGCGACAGAGAAGAGGATGTCACTGATCAAGGCTTGGGAGGAAAGTGAAAAGTCAAAGGCTGAGAACAAAGCACACAAAAAGCTATCTTCTGTTGTGGCATGGGAGAATAGCAAGAAAGCATCTGTTGAGGCTGAGTTAAAGAAGATTGAGGAAAGTTTGGAGAAGAAGAAGGCTGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAAACAGCAGAGGAGAAGAGGGCAATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGACGGCTGCCAAGTACCGTGCCACCGGTACCGCCCCGAAGAAGCTTCTCGGCTGCTTC DTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCF Homology
BLAST of MS017786 vs. NCBI nr
Match: XP_022159488.1 (remorin-like [Momordica charantia]) HSP 1 Score: 217.2 bits (552), Expect = 7.6e-53 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS017786 vs. NCBI nr
Match: TYK03337.1 (remorin [Cucumis melo var. makuwa]) HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. NCBI nr
Match: XP_008465865.1 (PREDICTED: remorin [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. NCBI nr
Match: KAA0038488.1 (remorin [Cucumis melo var. makuwa]) HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. NCBI nr
Match: XP_038888841.1 (LOW QUALITY PROTEIN: remorin-like [Benincasa hispida]) HSP 1 Score: 207.6 bits (527), Expect = 6.0e-50 Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.4e-46 Identity = 103/121 (85.12%), Postives = 113/121 (93.39%), Query Frame = 0
BLAST of MS017786 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.7e-44 Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of MS017786 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-40 Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of MS017786 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38 Identity = 86/121 (71.07%), Postives = 101/121 (83.47%), Query Frame = 0
BLAST of MS017786 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.1e-09 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of MS017786 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MS017786 vs. ExPASy TrEMBL
Match: A0A5A7T6L0 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00110 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. ExPASy TrEMBL
Match: A0A5D3BV44 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6571G00120 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51 Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. ExPASy TrEMBL
Match: A0A6J1H1B9 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49 Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of MS017786 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 177.9 bits (450), Expect = 4.7e-45 Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of MS017786 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 177.9 bits (450), Expect = 4.7e-45 Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0
BLAST of MS017786 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41 Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of MS017786 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 166.4 bits (420), Expect = 1.4e-41 Identity = 93/121 (76.86%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of MS017786 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 160.6 bits (405), Expect = 7.8e-40 Identity = 86/121 (71.07%), Postives = 101/121 (83.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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