Homology
BLAST of MS017781 vs. NCBI nr
Match:
XP_022155768.1 (protein SHORTAGE IN CHIASMATA 1 [Momordica charantia])
HSP 1 Score: 3240.7 bits (8401), Expect = 0.0e+00
Identity = 1645/1672 (98.39%), Postives = 1653/1672 (98.86%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS
Sbjct: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
KFFDDVLPRRID DNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG
Sbjct: 61 KFFDDVLPRRIDYDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
Query: 121 WKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
WKNFGSETSETEFMD GADI+IRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE
Sbjct: 121 WKNFGSETSETEFMDIGADIRIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
Query: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFPF 240
VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYF EQKSCLFEIGF QDQKLLHQVTFPF
Sbjct: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFLEQKSCLFEIGFAQDQKLLHQVTFPF 240
Query: 241 LEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
LEVDEMVPETLVVLTFQD LFFILENT+SPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN
Sbjct: 241 LEVDEMVPETLVVLTFQDELFFILENTESPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
Query: 301 FLSPCASSELASPGISGGSDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLDIY 360
FLSPCASSELASPGISGGSDLMSLMETLEIPASS VQTKSSGDLTVGPAIFEEFQLLDIY
Sbjct: 301 FLSPCASSELASPGISGGSDLMSLMETLEIPASSAVQTKSSGDLTVGPAIFEEFQLLDIY 360
Query: 361 SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ 420
SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ
Sbjct: 361 SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ 420
Query: 421 GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI 480
GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI
Sbjct: 421 GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI 480
Query: 481 EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLND 540
EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYG+SMFPSQTIEVASSKLLND
Sbjct: 481 EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGDSMFPSQTIEVASSKLLND 540
Query: 541 RCQQKGRQDLAT------KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
RCQQKGRQDLA KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM
Sbjct: 541 RCQQKGRQDLAAVVGNTEKALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
Query: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL
Sbjct: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
Query: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC
Sbjct: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
Query: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS
Sbjct: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
Query: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD
Sbjct: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
Query: 841 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
LVSNCLLVSQEHISGSFPF+KFSIILEYGG NGSSQISTYLSKLIDMPHPHFVTLELDNC
Sbjct: 841 LVSNCLLVSQEHISGSFPFNKFSIILEYGGSNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
Query: 901 GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV 960
GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV
Sbjct: 901 GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV 960
Query: 961 PRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE 1020
PR VPVVPLVDKSQHIDL+SFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE
Sbjct: 961 PRGVPVVPLVDKSQHIDLMSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE 1020
Query: 1021 RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV 1080
RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV
Sbjct: 1021 RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV 1080
Query: 1081 LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG 1140
LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG
Sbjct: 1081 LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG 1140
Query: 1141 LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE 1200
LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE
Sbjct: 1141 LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE 1200
Query: 1201 SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN 1260
SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN
Sbjct: 1201 SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN 1260
Query: 1261 MDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF 1320
MDFLNSDPLNPF VTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF
Sbjct: 1261 MDFLNSDPLNPFTVVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF 1320
Query: 1321 DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ 1380
DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ
Sbjct: 1321 DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ 1380
Query: 1381 HEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC 1440
HEELIGEV++LIDKPVLKDDF TMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC
Sbjct: 1381 HEELIGEVVNLIDKPVLKDDFATMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC 1440
Query: 1441 SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG 1500
SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG
Sbjct: 1441 SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG 1500
Query: 1501 SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSVPSGSSS 1560
SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNR+QSVPSGSSS
Sbjct: 1501 SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRRQSVPSGSSS 1560
Query: 1561 PFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL 1620
PFPEHLGNVKKTIK RSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL
Sbjct: 1561 PFPEHLGNVKKTIK-RSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL 1620
Query: 1621 IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK
Sbjct: 1621 IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1671
BLAST of MS017781 vs. NCBI nr
Match:
XP_022971834.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima])
HSP 1 Score: 2458.7 bits (6371), Expect = 0.0e+00
Identity = 1294/1677 (77.16%), Postives = 1406/1677 (83.84%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
WKNFGSETSE EF D G +I+ RN + MIQFETPQLDAFLENA L E+EEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMPE 180
Query: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFPF 240
VEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TFPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
LEVDEMV ETL L+ QD LFFILENT+S HRIQD NLLVNNEEYL M+ D EEFLSD+
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSDH 300
Query: 301 FLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLDI 360
FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLLD
Sbjct: 301 FLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSN 420
YSN F V FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDD FKSLPVPILS+
Sbjct: 361 YSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILSS 420
Query: 421 QGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKP 480
QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLKP 480
Query: 481 IEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLN 540
+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VAS KLLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLLN 540
Query: 541 DRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPAG + ESVFSAID N
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNTT 600
Query: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
LPK S DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNETEL
Sbjct: 601 LPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
RK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
F+GIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MVD+EIT+SHPALTT Q+ILCS
Sbjct: 721 FFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCS- 780
Query: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
+T+ S+LKVLVVANQIFWWSLK + GS+G+SF E+ Y S TD++VSN + MVDD
Sbjct: 781 ------RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDD 840
Query: 841 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
L SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD C
Sbjct: 841 LASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKC 900
Query: 901 GNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDC 960
GNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA + TIE E+
Sbjct: 901 GNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENR 960
Query: 961 AVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQV 1020
VP R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGVQV
Sbjct: 961 RVPLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQV 1020
Query: 1021 VERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSFTF 1080
VERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF F
Sbjct: 1021 VERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAF 1080
Query: 1081 SGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL
Sbjct: 1081 RGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
Query: 1141 MTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYC 1200
MTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+KY
Sbjct: 1141 MTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYS 1200
Query: 1201 IPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQC 1260
IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG QC
Sbjct: 1201 IPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQC 1260
Query: 1261 IDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHN 1320
I+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQNHN
Sbjct: 1261 IEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHN 1320
Query: 1321 LESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRNGN 1380
L SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N N
Sbjct: 1321 LASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMN 1380
Query: 1381 KSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQS 1440
KSEN HEELI EV +LID PVLKD F TMAPMNFLP M DNE DSSRKSKIQRRLSY QS
Sbjct: 1381 KSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQS 1440
Query: 1441 GNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIE 1500
+PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGLI+
Sbjct: 1441 DHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQ 1500
Query: 1501 NSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSVP 1560
N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ SVP
Sbjct: 1501 NPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVP 1560
Query: 1561 SGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNS 1620
GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSSNS
Sbjct: 1561 RGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSSNS 1620
Query: 1621 SKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
SKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 SKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of MS017781 vs. NCBI nr
Match:
XP_022971833.1 (protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima])
HSP 1 Score: 2454.5 bits (6360), Expect = 0.0e+00
Identity = 1294/1679 (77.07%), Postives = 1407/1679 (83.80%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFM--DNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVL 180
WKNFGSETSE EF+ D G +I+ RN + MIQFETPQLDAFLENA L E+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTF 240
PEVEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMV ETL L+ QD LFFILENT+S HRIQD NLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DNFLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLL 360
D+FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN F V FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINL 480
S+QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKL 540
KP+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDAN 600
LN+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPAG + ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 AMLPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNET 660
LPK S DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWY 720
ELRK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILC 780
LCF+GIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MVD+EIT+SHPALTT Q+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMV 840
S +T+ S+LKVLVVANQIFWWSLK + GS+G+SF E+ Y S TD++VSN + MV
Sbjct: 781 S-------RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMV 840
Query: 841 DDLVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELD 900
DDL SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD
Sbjct: 841 DDLASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELD 900
Query: 901 NCGNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPE 960
CGNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA + TIE E
Sbjct: 901 KCGNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAE 960
Query: 961 DCAVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGV 1020
+ VP R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGV
Sbjct: 961 NRRVPLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGV 1020
Query: 1021 QVVERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSF 1080
QVVERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF
Sbjct: 1021 QVVERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSF 1080
Query: 1081 TFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
F GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS
Sbjct: 1081 AFRGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
Query: 1141 KLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKK 1200
KLMTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+K
Sbjct: 1141 KLMTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRK 1200
Query: 1201 YCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGA 1260
Y IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG
Sbjct: 1201 YSIPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGT 1260
Query: 1261 QCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQN 1320
QCI+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQN
Sbjct: 1261 QCIEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQN 1320
Query: 1321 HNLESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRN 1380
HNL SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N
Sbjct: 1321 HNLASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHN 1380
Query: 1381 GNKSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYE 1440
NKSEN HEELI EV +LID PVLKD F TMAPMNFLP M DNE DSSRKSKIQRRLSY
Sbjct: 1381 MNKSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYG 1440
Query: 1441 QSGNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGL 1500
QS +PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGL
Sbjct: 1441 QSDHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGL 1500
Query: 1501 IENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQS 1560
I+N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ S
Sbjct: 1501 IQNPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHS 1560
Query: 1561 VPSGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSS 1620
VP GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSS
Sbjct: 1561 VPRGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSS 1620
Query: 1621 NSSKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
NSSKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 NSSKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of MS017781 vs. NCBI nr
Match:
XP_023554172.1 (protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2450.6 bits (6350), Expect = 0.0e+00
Identity = 1294/1678 (77.12%), Postives = 1406/1678 (83.79%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSSGSV TR E+EAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFM-DNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLP 180
WKNFGSETSE EF+ D G +I+ RN + MIQFETPQLDAFLENA L EKEEV ILT +P
Sbjct: 121 WKNFGSETSEMEFIKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGMP 180
Query: 181 EVEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFP 240
EVEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TFP
Sbjct: 181 EVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFP 240
Query: 241 FLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSD 300
FLEVDEMV ETL L+ QD LFFILENT+S H IQD NLLVNNEEYL SM+ D EEFLSD
Sbjct: 241 FLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLSD 300
Query: 301 NFLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLD 360
+FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLLD
Sbjct: 301 HFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLD 360
Query: 361 IYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILS 420
YSN F V DLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDDTFKSLPVPILS
Sbjct: 361 TYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILS 420
Query: 421 NQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLK 480
+QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINLK
Sbjct: 421 SQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLK 480
Query: 481 PIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLL 540
P+EFDQEPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VASSKLL
Sbjct: 481 PVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKLL 540
Query: 541 NDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANA 600
N+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPA V + ESVFS ID N
Sbjct: 541 NERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTNT 600
Query: 601 MLPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETE 660
LPK DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNETE
Sbjct: 601 TLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETE 660
Query: 661 LRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYL 720
LRK YLP VAEDY LMLSLPKQ LIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WYL
Sbjct: 661 LRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYL 720
Query: 721 CFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCS 780
CFYGIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MV REIT+SHPALTT Q+ILCS
Sbjct: 721 CFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCS 780
Query: 781 SIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVD 840
+T+ S+LKVLVVANQIFWWSLKK+ GS+G+SF EL Y S TD++VSN + MVD
Sbjct: 781 -------RTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMVD 840
Query: 841 DLVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDN 900
DL SNCLLVS+E+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD
Sbjct: 841 DLASNCLLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDK 900
Query: 901 CGNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPED 960
CGNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA P+ TIE E+
Sbjct: 901 CGNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAEN 960
Query: 961 CAVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQ 1020
V R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGVQ
Sbjct: 961 RRVSLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQ 1020
Query: 1021 VVERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSFT 1080
VVERDL LPVDLII +CL WYDCTNI RK STSN+AS L I+NIATDVLTS+SF
Sbjct: 1021 VVERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSFA 1080
Query: 1081 FSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK 1140
F GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK
Sbjct: 1081 FRGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSK 1140
Query: 1141 LMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKY 1200
LMTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+KY
Sbjct: 1141 LMTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKY 1200
Query: 1201 CIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQ 1260
IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG+Q
Sbjct: 1201 SIPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGSQ 1260
Query: 1261 CIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNH 1320
CI+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQNH
Sbjct: 1261 CIEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNH 1320
Query: 1321 NLESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRNG 1380
NL SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N
Sbjct: 1321 NLASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHNM 1380
Query: 1381 NKSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQ 1440
NKSEN HEELI EV +LID PVLKD F TMAPMNFLP M +NE DSSRKSKIQRRLSY Q
Sbjct: 1381 NKSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQ 1440
Query: 1441 SGNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLI 1500
S +PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGL
Sbjct: 1441 SDHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLT 1500
Query: 1501 ENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSV 1560
+N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ SV
Sbjct: 1501 QNPLRDSKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSV 1560
Query: 1561 PSGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSN 1620
P GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSSN
Sbjct: 1561 PRGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSSN 1620
Query: 1621 SSKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
SSKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 SSKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1666
BLAST of MS017781 vs. NCBI nr
Match:
XP_023554171.1 (protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2450.2 bits (6349), Expect = 0.0e+00
Identity = 1294/1679 (77.07%), Postives = 1406/1679 (83.74%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSSGSV TR E+EAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSGSVGTRLREQEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFM--DNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVL 180
WKNFGSETSE EF+ D G +I+ RN + MIQFETPQLDAFLENA L EKEEV ILT +
Sbjct: 121 WKNFGSETSEMEFIKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEKEEVQILTGM 180
Query: 181 PEVEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTF 240
PEVEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMV ETL L+ QD LFFILENT+S H IQD NLLVNNEEYL SM+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHMIQDDNLLVNNEEYLSSMRCDAEEFLS 300
Query: 301 DNFLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLL 360
D+FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGLSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN F V DLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDDTFKSLPVPIL
Sbjct: 361 DTYSNQHFGVILDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL 420
Query: 421 SNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINL 480
S+QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL 480
Query: 481 KPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKL 540
KP+EFDQEPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VASSKL
Sbjct: 481 KPVEFDQEPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSKL 540
Query: 541 LNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDAN 600
LN+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPA V + ESVFS ID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPARVRKSESVFSEIDTN 600
Query: 601 AMLPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNET 660
LPK DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNET
Sbjct: 601 TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWY 720
ELRK YLP VAEDY LMLSLPKQ LIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQMLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILC 780
LCFYGIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MV REIT+SHPALTT Q+ILC
Sbjct: 721 LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC 780
Query: 781 SSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMV 840
S +T+ S+LKVLVVANQIFWWSLKK+ GS+G+SF EL Y S TD++VSN + MV
Sbjct: 781 S-------RTSISSLKVLVVANQIFWWSLKKLLGSLGISFAELNYGSLTDEQVSNANAMV 840
Query: 841 DDLVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELD 900
DDL SNCLLVS+E+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD
Sbjct: 841 DDLASNCLLVSEEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELD 900
Query: 901 NCGNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPE 960
CGNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA P+ TIE E
Sbjct: 901 KCGNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAE 960
Query: 961 DCAVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGV 1020
+ V R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGV
Sbjct: 961 NRRVSLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGV 1020
Query: 1021 QVVERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSF 1080
QVVERDL LPVDLII +CL WYDCTNI RK STSN+AS L I+NIATDVLTS+SF
Sbjct: 1021 QVVERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLSLNLCIENIATDVLTSLSF 1080
Query: 1081 TFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
F GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS
Sbjct: 1081 AFRGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
Query: 1141 KLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKK 1200
KLMTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+K
Sbjct: 1141 KLMTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRK 1200
Query: 1201 YCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGA 1260
Y IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG+
Sbjct: 1201 YSIPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGS 1260
Query: 1261 QCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQN 1320
QCI+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQN
Sbjct: 1261 QCIEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQN 1320
Query: 1321 HNLESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRN 1380
HNL SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N
Sbjct: 1321 HNLASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSSFVQNQGLDRSKKKIHNFHN 1380
Query: 1381 GNKSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYE 1440
NKSEN HEELI EV +LID PVLKD F TMAPMNFLP M +NE DSSRKSKIQRRLSY
Sbjct: 1381 MNKSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYG 1440
Query: 1441 QSGNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGL 1500
QS +PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGL
Sbjct: 1441 QSDHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGL 1500
Query: 1501 IENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQS 1560
+N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ S
Sbjct: 1501 TQNPLRDSKVSFSLSEKHTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHS 1560
Query: 1561 VPSGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSS 1620
VP GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSS
Sbjct: 1561 VPRGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSS 1620
Query: 1621 NSSKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
NSSKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 NSSKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of MS017781 vs. ExPASy Swiss-Prot
Match:
F4KG50 (Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 849.4 bits (2193), Expect = 7.1e-245
Identity = 635/1729 (36.73%), Postives = 915/1729 (52.92%), Query Frame = 0
Query: 1 MRTRFLNIDYFAP------ENFSFLRLPLPHLASEPL--STVADLLQFDSVPEISLGIDS 60
MRTRFLNIDYF+ E FL LP P P+ + D L+F S+ +S+ I +
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKIT 120
L I++ALSKF DV+P R+ D R+F + +
Sbjct: 61 LPIEAALSKFLSDVVPDRVSVDY-----------------RVF-------EIDDSSLGVY 120
Query: 121 YEDNVEGGWKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEV 180
Y D + G D T +I+ ETP+LD +EN LL E+
Sbjct: 121 YSDEKDDG------------------DAIADKATPKIIELETPELDFEMENKLLCTSED- 180
Query: 181 HILTVLPEVEFNLETL----NQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIG-FT 240
H+ +E + + + +L+ +++E +Y ++ I S+YF E + + E F
Sbjct: 181 HLQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFR 240
Query: 241 QDQKLLHQVTFPFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLC 300
+ Q FP LEVDE+ L L+ D +F +LE + +L++N++E +
Sbjct: 241 KIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIG 300
Query: 301 SMKYDVEEFLS-DNFLSPCASSELASPGISGGSDLMSLMETLEIPASSVQTKSSGDLTVG 360
S YD+ + LS D +L+ S++ D S M+ + I S + G + V
Sbjct: 301 SKDYDLLDVLSTDCYLNKSGQSDVVP------EDEFSEMDIVTILEISNAEEFQGKVAV- 360
Query: 361 PAIFEEFQLLDIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDD 420
P +EEFQ+LD+ ++ F++F L+ + E+ M ++ NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSS 480
FKSLP PIL + RS+ EDVL + QSLSAS+ IYL W+LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPS 540
EEI I+++ E E D Y ++FS+DA E +C E FYG S
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEP-FYGISNLDE 540
Query: 541 QTIEVASSKLLNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRG 600
S LL + Q+ G +D A KA +KS+S +DL+FF++P+K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 ESVFSAIDAN-----AMLPKASC-DGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHL 660
ES A ++ KASC G + P T + +H V S+NI L
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNPKTE---------EMILHSVRPSENIQAL 660
Query: 661 INNCEKTYLAILQNETELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEK 720
+ K+YL ++++E+E ++ED +LS+ K KLIDCI+K + + ++K
Sbjct: 661 VGEFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVH-KTQLADDK 720
Query: 721 IMTLATLYAIKQIAWYLCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDRE 780
T A L AIKQ+ WY+CF+GIH A++YL K+C S +K L L S +E + + +
Sbjct: 721 TFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETD 780
Query: 781 ITLSHPALTTTQDILCSSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELK 840
IT SHP+L Q IL S A K L++A ++FW SLK++ SMGLS+ +L
Sbjct: 781 ITRSHPSLAVIQGILQSEF-------ARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLN 840
Query: 841 YESPTDQRVS-NPDIMVDDL-VSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTY 900
SP+ R + + I + L +S+CL++S E IS SFP FS+I+EYGG N S + S +
Sbjct: 841 SPSPSGNRPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-F 900
Query: 901 LSKLIDMPHPHFVTLELDNCGNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPF 960
SKL P HF+ +ELD C C GV +P L + + VE KTG LE++LNF+P
Sbjct: 901 PSKLDSFPSFHFIKVELDMPSACGQLCAGVTVPYSLKMIKGDEVETKTGWLEEVLNFVPL 960
Query: 961 EEMYILAPPEATIEPEDCAVPRRVPVVPLVDKSQHI--DLVSFPEAIVIVNTQKFEKDMI 1020
E++ E T E E ++P+ ++ + I +S ++++VNT+ +K+MI
Sbjct: 961 EKVCYAGSSETTNESEFISMPQE------SERKRGIIEQGLSDQRSVIVVNTKTVDKEMI 1020
Query: 1021 VSRRSSYQRILALEKEGVQVVERDLSLPVDLIITSSVCLMWYDCTNIHRK--ASTSNDAS 1080
+SRRS+YQ++LA+EKEGVQVVERD LPVDL+++ +VCL+WYD + +K A+ +S
Sbjct: 1021 ISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSS 1080
Query: 1081 SCLWIDNIATDVLTSVSFTFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCS 1140
S WI +IAT+VLTS+SF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS
Sbjct: 1081 SLSWIGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCS 1140
Query: 1141 YSSELTDEIILGCIENVSKLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESN 1200
S+ LTDEIIL CI++ KL L+ KM ESE+LAESFLT+FPSVNPLTA ILSS +
Sbjct: 1141 SSANLTDEIILKCIKSSVKLSK--LHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGS 1200
Query: 1201 LADFLEWSHECRLRAIKKYCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEK 1260
L +F++ H+ ++ +KY +P+ESV LFS++C+YG REDS+S MTD SSSVSSGPDS+
Sbjct: 1201 LLEFMKLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDT 1260
Query: 1261 CHFNVDSKNKRRNFTGGAQCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEI 1320
H +V S +K++ + ID + D ++ P FA ++ + DS +D EI
Sbjct: 1261 HHVSVHSGSKKKQYIAEKDEIDMD-DLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEI 1320
Query: 1321 FYDFKGLSSSVNHFFDQNHNLESFDTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYV 1380
F+ V F D AP P + P DSW S PE D+ S
Sbjct: 1321 FH-----FDPVTEFSD-----------APFKPSGISHPNDSWPSKDPERFDKKSGPGSSS 1380
Query: 1381 RNQGLD-----------------------PSKRKIQNSRNGNK--------------SEN 1440
++ + P K K + G K SEN
Sbjct: 1381 KDTFWEKDQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSEN 1440
Query: 1441 QHEELIGEVLDLIDKPVLKDDFVTMAPMN-FLPLMFD-NEKDSSRKSKIQRRLSYEQSGN 1500
+ GEV+D DK L++DF N F ++ D NE++ RKSK R+LS+ S
Sbjct: 1441 FIADYKGEVIDRADK-YLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQ 1500
Query: 1501 PFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHP-------- 1560
P +SSS+ +++ D + N Y D +P
Sbjct: 1501 PNFPKAADIDSSSERYATEK--------------DSKYDNNTSLRGYADNYPAKRQRTLL 1560
Query: 1561 DEGLIENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRN 1620
+E L S + L E ISH +PLS A+RS + +SSPWT++FLNR+RE+SR
Sbjct: 1561 EEVLTRRSAVPTTELPFREE--ISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRA 1593
Query: 1621 R--QQSVPSGSSSPFPEHLGNVKK-TIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQ 1649
R QQS+PS +S P E GN+KK KR+SPSILEFFKY+GG+ L+ E+KRQ
Sbjct: 1621 RKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKGGNKLQ--------EEKRQ 1593
BLAST of MS017781 vs. ExPASy Swiss-Prot
Match:
B9F1C0 (Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SHOC1 PE=1 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.7e-142
Identity = 534/1836 (29.08%), Postives = 815/1836 (44.39%), Query Frame = 0
Query: 1 MRTRFLNIDYFAP------------ENFSFLRLPLPHLASEP---LSTVADLLQFDSVPE 60
MRTRFL DYFAP E FSF LP+P L +P T AD L +V +
Sbjct: 1 MRTRFLATDYFAPSSSSAAGKALALEFFSFPSLPVPALPPDPHFLPFTSADELPAATVAD 60
Query: 61 ISLGIDSLTIDSALSKFFDDVLPRRI--------DD--DNGNLDAGGRSSRLRDSRDRIF 120
LG L I SALS F V+P+ + D+ D+ D GG D F
Sbjct: 61 DGLG--PLPIASALSDFLAAVIPQALPVPTVPAADEVLDDFLYDRGGYG---EDFSSWEF 120
Query: 121 SSGSVETRCPEEEAKITYEDNVEG-GWKNFGSETSETEFMDNGADIKIRNLTYSMIQFET 180
+ + + E I E + +G G ++ G E S M +K ++FE
Sbjct: 121 GAFRI-PKASEGYGVINREKDEKGEGSRSDGLEISSV--MKRWEQLK-------ELRFEV 180
Query: 181 PQLDAFL----ENALLSEKEE---VHILTVLPEVEFNLETLN---QGLLKYPFEVKESVY 240
++D + + A E+E V +L +P+++ +L+ ++ ++Y ++ ESVY
Sbjct: 181 VEVDLLMALQEDIASFGEEESGGGVTLLLRVPDMKIHLDFIDIETDIKIRYQSDLPESVY 240
Query: 241 DIEGI------NSEYFFEQKSCLFEIGFTQDQKLLHQVTFPFLEVDEMVPETLVVLTFQD 300
+E + + + ++ C EI L H P LEV E LT D
Sbjct: 241 QVEKVPVKDNDGNGHSSLREDCCLEIA-----ALDHGAVIPRLEVSRNSWELDDCLTETD 300
Query: 301 --GLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDNFLSPCASSELASPGIS 360
G+F + +IQ + + + E+L S D+ F+ ++ +PC ++ P
Sbjct: 301 RYGVFDNVVRHLDEAQIQ--HSVFKSTEFLRSTDMDMLTFVCED--APCHDIQVDKPAEI 360
Query: 361 GGSDLMSLME-----TLEIPASSVQTKSSGDLTVGPA--IFEEFQLLDIYSNNSFEVFFD 420
+ M ++ LE ++ K G + P + EE Q++D S+N F++
Sbjct: 361 KAAVEMDVVRINGNILLEKNSALYPLKPDGTCSDLPCSILLEEVQIIDFPSDNVFKMLVQ 420
Query: 421 LELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQGSERSVCAFI 480
E + ++ + + + E +V ELALVDDTF+SLP PIL++ + RS I
Sbjct: 421 SETNKMNISDEIFKDDFDPARRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPI 480
Query: 481 EDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPIEFD-QEPCEN 540
+++L +L LSASDGIYLDWHLL E C+ I SY +M+EE + + Q C++
Sbjct: 481 QEILCSLKPHPLSASDGIYLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQS 540
Query: 541 DNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLNDRCQQKG--R 600
++F D + + + E K S Y P+ +C+Q+G R
Sbjct: 541 TSVFVSDFLED---FQRSPKLQDEDKHSDIY----VPAPLSHDPQKLEATQKCEQEGGTR 600
Query: 601 QDLATKALSSWKS------ISESNDLSFFLNPQKPAGVGRGESVFSAIDANAMLPKASCD 660
+ K S KS IS S DL+F+LN + G S +D S +
Sbjct: 601 NHSSMKRPSPEKSSSFPELISHSGDLNFYLNVRSATKSGTNNENTSTLDV-----PHSEE 660
Query: 661 GKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETELRKTYLPC 720
L+ D + + +H V S+ I LI +Y + LQ T R ++
Sbjct: 661 QALSLSTRAKVDKL------IEIHPVSPSNLIQGLIEQIHASYTSALQESTYWRHSF--- 720
Query: 721 VAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEK-IMTLATLYAIKQIAWYLCFYGIHP 780
+++ L +S KQKL++ I +G+ + E K M L LYA+KQ+A+YLCF+G+H
Sbjct: 721 -SDEQGLGIS--KQKLLELITGEGSEGSYNHCEHKDKMELIVLYALKQVAYYLCFFGLHA 780
Query: 781 AHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSSIPKDEH 840
AHLY+ L SLE RL +L I +A R +R++ SHP+L+ + IL S+ D+
Sbjct: 781 AHLYISNLTRSLENTPERLKHILWSISEAQRKSERQLFESHPSLSCIETILRSNKQIDQ- 840
Query: 841 KTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPT------DQRVSNPDIMVDD 900
K+L+VA++ FW L + SM ++F E T ++ S ++ +
Sbjct: 841 -------KILIVADRAFWLPLGQKLASMRMTFVEFGQNPATTFVDLVNKTNSTAWVLEEL 900
Query: 901 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 960
L S+C+L+ ++I SFPF KF IILEYGG N SS + + KL +P HF+ +++D
Sbjct: 901 LKSDCILLDNKNIPASFPFDKFGIILEYGGPNKSSTLLSLAPKLDGLPPLHFLYVKVDG- 960
Query: 961 GNCKAFCGGVDMPNELTIDENSLVENKTGMLEK-------------LLNFLPF------- 1020
K F + N D S ++ L+K LNF+P
Sbjct: 961 ---KDFPAALVEDNHKDQDLKSTLDKVLLTLQKDLQERMNKMRIVDSLNFIPATNQLQGL 1020
Query: 1021 ---EEMYILAPPEATIEPEDCAVPRRV------------------------------PV- 1080
+ A + P+D P R+ PV
Sbjct: 1021 QEKRSKHFAADATKELLPDD--QPHRLQNLNKKNTFDSHNVVLADEQLHIQQTLSNKPVV 1080
Query: 1081 ----VPLVDKSQHIDLV-------------------------------SFPEAIVIVNTQ 1140
VP V+KS V S P+ +++VNT
Sbjct: 1081 NSQCVPTVEKSSSTSSVSANVLKDPQENQSTTDLPSCVKNDCIMPGRLSVPDVVIVVNTG 1140
Query: 1141 KFEKDMIVSRRSSYQRILALEKEGVQVVERDLSLPVDLIITSSVCLMWYDCTNIHRKAST 1200
K M+VSRRSSYQ+ILALEK G+QVVERD+ LPVDLI++++VCL+WY+ T
Sbjct: 1141 NHGKTMLVSRRSSYQQILALEKGGMQVVERDIDLPVDLILSAAVCLVWYETALFEANELT 1200
Query: 1201 SNDASSCLW--IDNIATDVLTSVSFTFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEI 1260
++ +S + ++NIAT++L SVSF+F+GC++VFEGE LS VM+SSD LY AAASL++
Sbjct: 1201 TSAETSGIKENVENIATNILMSVSFSFTGCIMVFEGEADFLSAVMDSSDSLYTAAASLDM 1260
Query: 1261 DFQLFCSYSSELTDEIILGCIENVSKLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHG 1320
+ QLF S++ TDEIIL CI NV+ L P + ESE+LAESFLT FPS+NP++A+
Sbjct: 1261 NLQLFFSHTPRSTDEIILNCITNVTSCYKAPL-PDIPESESLAESFLTSFPSINPVSAYM 1320
Query: 1321 ILSSESNLADFLEWSHECRLRAIKKYCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVS 1380
+LSS +L +FL W HE R++A+ KY + + +SLF+ALCK+GE +S+S MT+CSS S
Sbjct: 1321 LLSSGGSLVEFLSWPHERRIQAVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDS 1380
Query: 1381 SGPDSEKCHFNVDSKNKRRNFTGGAQCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSK 1440
D K K+R+ C L SD LN E P +
Sbjct: 1381 ---DISSAFLQSPRKRKQRSLQA---CAVPTNKLLFSDSLNQIPGDYAEHAEVFSPSKLR 1440
Query: 1441 MFED--------PEIFYDFKGLSSSVNHFFDQNHNLESFDTTAPMDPISVYKPQDSWIST 1500
F D P++F FD++ N+ S + Y+ + +
Sbjct: 1441 KFSDMDNTIPELPDVF------------TFDESLNMRSEGFS--------YQQKKHDVDA 1500
Query: 1501 AP---EISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQHEELIGEVLDLIDKPVLK 1560
P I+D + GL P+ + N R GN ++D D P
Sbjct: 1501 IPGNQVINDDF--------SNGLTPN-NQAYNRRTGN------------MVDTFDLPWQP 1560
Query: 1561 DDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFCSVDIANNSSSDIWSSINL 1620
+ F S R NP S N W+
Sbjct: 1561 E--------------FGGTHPSKSTFHTSRPSCSRTHSNPVFSTAFEINDDPGEWNISGG 1620
Query: 1621 QRQVSQGL-NNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRGSKVLFSHSENPISHSDA 1653
+Q +GL + D S++ + M RY + + + H + ++
Sbjct: 1621 TKQTWKGLAHGGTVDDSYRYD-MDNRYHEPRDE-------------IMQHPASSLAFQ-- 1680
BLAST of MS017781 vs. ExPASy TrEMBL
Match:
A0A6J1DNT5 (protein SHORTAGE IN CHIASMATA 1 OS=Momordica charantia OX=3673 GN=LOC111022805 PE=4 SV=1)
HSP 1 Score: 3240.7 bits (8401), Expect = 0.0e+00
Identity = 1645/1672 (98.39%), Postives = 1653/1672 (98.86%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS
Sbjct: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
KFFDDVLPRRID DNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG
Sbjct: 61 KFFDDVLPRRIDYDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
Query: 121 WKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
WKNFGSETSETEFMD GADI+IRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE
Sbjct: 121 WKNFGSETSETEFMDIGADIRIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
Query: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFPF 240
VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYF EQKSCLFEIGF QDQKLLHQVTFPF
Sbjct: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFLEQKSCLFEIGFAQDQKLLHQVTFPF 240
Query: 241 LEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
LEVDEMVPETLVVLTFQD LFFILENT+SPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN
Sbjct: 241 LEVDEMVPETLVVLTFQDELFFILENTESPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
Query: 301 FLSPCASSELASPGISGGSDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLDIY 360
FLSPCASSELASPGISGGSDLMSLMETLEIPASS VQTKSSGDLTVGPAIFEEFQLLDIY
Sbjct: 301 FLSPCASSELASPGISGGSDLMSLMETLEIPASSAVQTKSSGDLTVGPAIFEEFQLLDIY 360
Query: 361 SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ 420
SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ
Sbjct: 361 SNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSNQ 420
Query: 421 GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI 480
GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI
Sbjct: 421 GSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKPI 480
Query: 481 EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLND 540
EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYG+SMFPSQTIEVASSKLLND
Sbjct: 481 EFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGDSMFPSQTIEVASSKLLND 540
Query: 541 RCQQKGRQDLAT------KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
RCQQKGRQDLA KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM
Sbjct: 541 RCQQKGRQDLAAVVGNTEKALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
Query: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL
Sbjct: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
Query: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC
Sbjct: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
Query: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS
Sbjct: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
Query: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD
Sbjct: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
Query: 841 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
LVSNCLLVSQEHISGSFPF+KFSIILEYGG NGSSQISTYLSKLIDMPHPHFVTLELDNC
Sbjct: 841 LVSNCLLVSQEHISGSFPFNKFSIILEYGGSNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
Query: 901 GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV 960
GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV
Sbjct: 901 GNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDCAV 960
Query: 961 PRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE 1020
PR VPVVPLVDKSQHIDL+SFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE
Sbjct: 961 PRGVPVVPLVDKSQHIDLMSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQVVE 1020
Query: 1021 RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV 1080
RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV
Sbjct: 1021 RDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSCLWIDNIATDVLTSVSFTFSGCV 1080
Query: 1081 LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG 1140
LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG
Sbjct: 1081 LVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLMTRG 1140
Query: 1141 LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE 1200
LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE
Sbjct: 1141 LYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYCIPDE 1200
Query: 1201 SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN 1260
SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN
Sbjct: 1201 SVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQCIDKN 1260
Query: 1261 MDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF 1320
MDFLNSDPLNPF VTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF
Sbjct: 1261 MDFLNSDPLNPFTVVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHNLESF 1320
Query: 1321 DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ 1380
DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ
Sbjct: 1321 DTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYVRNQGLDPSKRKIQNSRNGNKSENQ 1380
Query: 1381 HEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC 1440
HEELIGEV++LIDKPVLKDDF TMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC
Sbjct: 1381 HEELIGEVVNLIDKPVLKDDFATMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQSGNPFC 1440
Query: 1441 SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG 1500
SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG
Sbjct: 1441 SVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIENSVRG 1500
Query: 1501 SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSVPSGSSS 1560
SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNR+QSVPSGSSS
Sbjct: 1501 SKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRRQSVPSGSSS 1560
Query: 1561 PFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL 1620
PFPEHLGNVKKTIK RSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL
Sbjct: 1561 PFPEHLGNVKKTIK-RSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNSSKNEL 1620
Query: 1621 IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK
Sbjct: 1621 IPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1671
BLAST of MS017781 vs. ExPASy TrEMBL
Match:
A0A6J1I9N8 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2458.7 bits (6371), Expect = 0.0e+00
Identity = 1294/1677 (77.16%), Postives = 1406/1677 (83.84%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
WKNFGSETSE EF D G +I+ RN + MIQFETPQLDAFLENA L E+EEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAMPE 180
Query: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFPF 240
VEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TFPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
LEVDEMV ETL L+ QD LFFILENT+S HRIQD NLLVNNEEYL M+ D EEFLSD+
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLSDH 300
Query: 301 FLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLDI 360
FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLLD
Sbjct: 301 FLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSN 420
YSN F V FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDD FKSLPVPILS+
Sbjct: 361 YSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPILSS 420
Query: 421 QGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKP 480
QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINLKP 480
Query: 481 IEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLN 540
+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VAS KLLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKLLN 540
Query: 541 DRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPAG + ESVFSAID N
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTNTT 600
Query: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
LPK S DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNETEL
Sbjct: 601 LPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
RK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
F+GIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MVD+EIT+SHPALTT Q+ILCS
Sbjct: 721 FFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILCS- 780
Query: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
+T+ S+LKVLVVANQIFWWSLK + GS+G+SF E+ Y S TD++VSN + MVDD
Sbjct: 781 ------RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMVDD 840
Query: 841 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
L SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD C
Sbjct: 841 LASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKC 900
Query: 901 GNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDC 960
GNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA + TIE E+
Sbjct: 901 GNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAENR 960
Query: 961 AVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQV 1020
VP R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGVQV
Sbjct: 961 RVPLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGVQV 1020
Query: 1021 VERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSFTF 1080
VERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF F
Sbjct: 1021 VERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAF 1080
Query: 1081 SGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL
Sbjct: 1081 RGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
Query: 1141 MTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYC 1200
MTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+KY
Sbjct: 1141 MTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYS 1200
Query: 1201 IPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQC 1260
IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG QC
Sbjct: 1201 IPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQC 1260
Query: 1261 IDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHN 1320
I+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQNHN
Sbjct: 1261 IEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHN 1320
Query: 1321 LESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRNGN 1380
L SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N N
Sbjct: 1321 LASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHNMN 1380
Query: 1381 KSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQS 1440
KSEN HEELI EV +LID PVLKD F TMAPMNFLP M DNE DSSRKSKIQRRLSY QS
Sbjct: 1381 KSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYGQS 1440
Query: 1441 GNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIE 1500
+PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGLI+
Sbjct: 1441 DHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLIQ 1500
Query: 1501 NSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSVP 1560
N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ SVP
Sbjct: 1501 NPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVP 1560
Query: 1561 SGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNS 1620
GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSSNS
Sbjct: 1561 RGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSSNS 1620
Query: 1621 SKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
SKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 SKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of MS017781 vs. ExPASy TrEMBL
Match:
A0A6J1I842 (protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2454.5 bits (6360), Expect = 0.0e+00
Identity = 1294/1679 (77.07%), Postives = 1407/1679 (83.80%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFM--DNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVL 180
WKNFGSETSE EF+ D G +I+ RN + MIQFETPQLDAFLENA L E+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTF 240
PEVEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMV ETL L+ QD LFFILENT+S HRIQD NLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DNFLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLL 360
D+FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN F V FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINL 480
S+QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKL 540
KP+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDAN 600
LN+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPAG + ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 AMLPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNET 660
LPK S DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWY 720
ELRK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILC 780
LCF+GIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MVD+EIT+SHPALTT Q+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMV 840
S +T+ S+LKVLVVANQIFWWSLK + GS+G+SF E+ Y S TD++VSN + MV
Sbjct: 781 S-------RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMV 840
Query: 841 DDLVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELD 900
DDL SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD
Sbjct: 841 DDLASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELD 900
Query: 901 NCGNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPE 960
CGNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA + TIE E
Sbjct: 901 KCGNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAE 960
Query: 961 DCAVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGV 1020
+ VP R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGV
Sbjct: 961 NRRVPLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGV 1020
Query: 1021 QVVERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSF 1080
QVVERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF
Sbjct: 1021 QVVERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSF 1080
Query: 1081 TFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
F GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS
Sbjct: 1081 AFRGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVS 1140
Query: 1141 KLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKK 1200
KLMTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+K
Sbjct: 1141 KLMTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRK 1200
Query: 1201 YCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGA 1260
Y IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG
Sbjct: 1201 YSIPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGT 1260
Query: 1261 QCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQN 1320
QCI+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQN
Sbjct: 1261 QCIEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQN 1320
Query: 1321 HNLESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRN 1380
HNL SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI N N
Sbjct: 1321 HNLASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIHNFHN 1380
Query: 1381 GNKSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYE 1440
NKSEN HEELI EV +LID PVLKD F TMAPMNFLP M DNE DSSRKSKIQRRLSY
Sbjct: 1381 MNKSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRRLSYG 1440
Query: 1441 QSGNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGL 1500
QS +PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGL
Sbjct: 1441 QSDHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGL 1500
Query: 1501 IENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQS 1560
I+N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ S
Sbjct: 1501 IQNPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHS 1560
Query: 1561 VPSGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSS 1620
VP GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSS
Sbjct: 1561 VPRGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSS 1620
Query: 1621 NSSKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
NSSKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 NSSKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1667
BLAST of MS017781 vs. ExPASy TrEMBL
Match:
A0A6J1I320 (protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470528 PE=4 SV=1)
HSP 1 Score: 2448.7 bits (6345), Expect = 0.0e+00
Identity = 1294/1683 (76.89%), Postives = 1407/1683 (83.60%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI+DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIEDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFM--DNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVL 180
WKNFGSETSE EF+ D G +I+ RN + MIQFETPQLDAFLENA L E+EEV ILT +
Sbjct: 121 WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDAFLENAFLFEEEEVQILTAM 180
Query: 181 PEVEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTF 240
PEVEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TF
Sbjct: 181 PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF 240
Query: 241 PFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLS 300
PFLEVDEMV ETL L+ QD LFFILENT+S HRIQD NLLVNNEEYL M+ D EEFLS
Sbjct: 241 PFLEVDEMVLETLAFLSLQDELFFILENTESAHRIQDDNLLVNNEEYLSFMRCDAEEFLS 300
Query: 301 DNFLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLL 360
D+FL PCA SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLL
Sbjct: 301 DHFLRPCAVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL 360
Query: 361 DIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPIL 420
D YSN F V FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDD FKSLPVPIL
Sbjct: 361 DTYSNQHFGVIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDKFKSLPVPIL 420
Query: 421 SNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINL 480
S+QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+ +S SSG+YSSYQNMLEEINL
Sbjct: 421 SSQGSEKPLNAFIEDVLANLNKQSLSASDGIYLDWHLLDGSSYSSGLYSSYQNMLEEINL 480
Query: 481 KPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKL 540
KP+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VAS KL
Sbjct: 481 KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASRKL 540
Query: 541 LNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDAN 600
LN+RCQQK RQ LA KALSSWKS SESNDL FFLN QKPAG + ESVFSAID N
Sbjct: 541 LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPAGARKSESVFSAIDTN 600
Query: 601 AMLPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNET 660
LPK S DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNET
Sbjct: 601 TTLPKVSRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET 660
Query: 661 ELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWY 720
ELRK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WY
Sbjct: 661 ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY 720
Query: 721 LCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILC 780
LCF+GIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MVD+EIT+SHPALTT Q+ILC
Sbjct: 721 LCFFGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVDKEITISHPALTTIQEILC 780
Query: 781 SSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMV 840
S +T+ S+LKVLVVANQIFWWSLK + GS+G+SF E+ Y S TD++VSN + MV
Sbjct: 781 S-------RTSTSSLKVLVVANQIFWWSLKILLGSLGISFAEINYGSLTDEQVSNANAMV 840
Query: 841 DDLVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELD 900
DDL SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD
Sbjct: 841 DDLASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELD 900
Query: 901 NCGNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPE 960
CGNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA + TIE E
Sbjct: 901 KCGNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASSKKTIEAE 960
Query: 961 DCAVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGV 1020
+ VP R PVVP+ DKSQH DLVSFPEAI+IVNTQKFEK+MIV RRSSYQRILALEKEGV
Sbjct: 961 NRRVPLRAPVVPVSDKSQHTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYQRILALEKEGV 1020
Query: 1021 QVVERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSF 1080
QVVERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF
Sbjct: 1021 QVVERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSF 1080
Query: 1081 TFSGCVL----VFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCI 1140
F GCVL VFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCI
Sbjct: 1081 AFRGCVLISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCI 1140
Query: 1141 ENVSKLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLR 1200
ENVSKLMTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL
Sbjct: 1141 ENVSKLMTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLH 1200
Query: 1201 AIKKYCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNF 1260
AI+KY IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNF
Sbjct: 1201 AIRKYSIPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNF 1260
Query: 1261 TGGAQCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHF 1320
TGG QCI+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+F
Sbjct: 1261 TGGTQCIEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNF 1320
Query: 1321 FDQNHNLESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQ 1380
FDQNHNL SFD T MDP V KP+D WISTAPEISD+I R CSS+V+NQGLD SK+KI
Sbjct: 1321 FDQNHNLASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRRCSSFVQNQGLDRSKKKIH 1380
Query: 1381 NSRNGNKSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRR 1440
N N NKSEN HEELI EV +LID PVLKD F TMAPMNFLP M DNE DSSRKSKIQRR
Sbjct: 1381 NFHNMNKSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLDNETDSSRKSKIQRR 1440
Query: 1441 LSYEQSGNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHP 1500
LSY QS +PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H
Sbjct: 1441 LSYGQSDHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHL 1500
Query: 1501 DEGLIENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRN 1560
DEGLI+N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRN
Sbjct: 1501 DEGLIQNPLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRN 1560
Query: 1561 RQQSVPSGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQS 1620
RQ SVP GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S
Sbjct: 1561 RQHSVPRGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPS 1620
Query: 1621 IQSSNSSKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKL 1666
QSSNSSKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKL
Sbjct: 1621 TQSSNSSKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKL 1671
BLAST of MS017781 vs. ExPASy TrEMBL
Match:
A0A6J1GJU9 (protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454972 PE=4 SV=1)
HSP 1 Score: 2437.1 bits (6315), Expect = 0.0e+00
Identity = 1284/1677 (76.57%), Postives = 1398/1677 (83.36%), Query Frame = 0
Query: 1 MRTRFLNIDYFAPENFSFLRLPLPHLASEPLSTVADLLQFDSVPEISLGIDSLTIDSALS 60
MRTRFLNID+FAP N SF RLP+PHL S PLSTV DLL FD +PEISLGIDSL+IDSA+S
Sbjct: 1 MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS 60
Query: 61 KFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKITYEDNVEGG 120
+FFDDVLPRRI DD+ DAG +SS S +RIFSS SV TR EEEAK TYEDN+EG
Sbjct: 61 RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS 120
Query: 121 WKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEVHILTVLPE 180
WKNFGSETSE EF D G +I+ RN + MIQFETPQLD FLENA L EKEEV ILT +PE
Sbjct: 121 WKNFGSETSEMEFKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAMPE 180
Query: 181 VEFNLETLNQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIGFTQDQKLLHQVTFPF 240
VEF+LETLNQGLLKYP EVKES+YD+E I SEY +Q+SCLFE F QDQKL HQ TFPF
Sbjct: 181 VEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTFPF 240
Query: 241 LEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLCSMKYDVEEFLSDN 300
LEVDEMV ETL L+ QD LFFILE+T+S H I D NLLVNNEEYL SM+ D EEFLSD+
Sbjct: 241 LEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLSDH 300
Query: 301 FLSPCASSELASPGISGG-SDLMSLMETLEIPASS-VQTKSSGDLTVGPAIFEEFQLLDI 360
FL PC SELASP ISGG SDLMS+METLEI SS VQTKSS DL+V PAIFEEFQLLD
Sbjct: 301 FLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLLDT 360
Query: 361 YSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDDTFKSLPVPILSN 420
YSN F FDLE+SA+SE+ DC SIE+ NFKSFNELIVCHEL LVDDTFKSLPVPILS+
Sbjct: 361 YSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPILSS 420
Query: 421 QGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSSYQNMLEEINLKP 480
QGSE+ + AFIEDVL NLN QSLSASDGIYLDWHLL+E+S SSG+YSSYQNMLEEINLKP
Sbjct: 421 QGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINLKP 480
Query: 481 IEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPSQTIEVASSKLLN 540
+EFD+EPCEND IFYRYVFSDDALVRERTE+KGE KESF G M QTI+VASS LLN
Sbjct: 481 VEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSILLN 540
Query: 541 DRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRGESVFSAIDANAM 600
+RCQQK RQ LA KALSSWKS SESNDL FFLN QKP GV + ESVFS ID N
Sbjct: 541 ERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTNTT 600
Query: 601 LPKASCDGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHLINNCEKTYLAILQNETEL 660
LPK DG LTN+PS S+ D SL Q NVAVHQVCLSDNILHLINN EKTYLAILQNETEL
Sbjct: 601 LPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNETEL 660
Query: 661 RKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEKIMTLATLYAIKQIAWYLC 720
RK YLP VAEDY LMLSLPKQKLIDCIKKIYLQG +TYWEEKIMTLATLYA KQI WYLC
Sbjct: 661 RKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWYLC 720
Query: 721 FYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDREITLSHPALTTTQDILCSS 780
FYGIHPAHLYLKKLC S ECLKSRLGFL+S IE+AG+MV REIT+SHPALTT Q+ILCS
Sbjct: 721 FYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILCS- 780
Query: 781 IPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELKYESPTDQRVSNPDIMVDD 840
+T+ S+LKVLVVANQIFWWSL+K+ GS+G+SF E+ Y S T ++VSN + MVDD
Sbjct: 781 ------RTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDD 840
Query: 841 LVSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTYLSKLIDMPHPHFVTLELDNC 900
L SNCLLVSQE+ISGSFPF+KFSI+LEYGGLNGSSQIS Y S LIDMPH HF+ LELD C
Sbjct: 841 LASNCLLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKC 900
Query: 901 GNCKAFCGGVDMP--NELTIDENSLVENKTGMLEKLLNFLPFEEMYILAPPEATIEPEDC 960
GNCKAFC GVD P NELTI+E SLVEN+T MLEKLLNFLP EE YILA P+ TIE E+
Sbjct: 901 GNCKAFCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENR 960
Query: 961 AVPRRVPVVPLVDKSQHIDLVSFPEAIVIVNTQKFEKDMIVSRRSSYQRILALEKEGVQV 1020
VP R PV P+ DKSQ+ DLVSFPEAI+IVNTQKFEK+MIV RRSSY+RILALEKEGVQV
Sbjct: 961 RVPLRAPVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQV 1020
Query: 1021 VERDLSLPVDLIITSSVCLMWYDCTNIHRKASTSNDASSC--LWIDNIATDVLTSVSFTF 1080
VERDL LPVDLII +CL WYDCTNI RK STSN+AS C L I+NIATDVLTS+SF F
Sbjct: 1021 VERDLCLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAF 1080
Query: 1081 SGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
GCVLVFEGEISSLS VMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL
Sbjct: 1081 RGCVLVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKL 1140
Query: 1141 MTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESNLADFLEWSHECRLRAIKKYC 1200
MTR +YPKMSESETLAESFLT FPS+NPL AHGILSSES LADFLEW HE RL AI+KY
Sbjct: 1141 MTRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYS 1200
Query: 1201 IPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEKCHFNVDSKNKRRNFTGGAQC 1260
IPD+ +SLFSALCKYGEREDSKS MTDCSSS+SSG DSEKCHFN +S+ KRRNFTGG QC
Sbjct: 1201 IPDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQC 1260
Query: 1261 IDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEIFYDFKGLSSSVNHFFDQNHN 1320
I+KN D L S+ LNPF A T E L ASK F S++FEDPEIF D KGLSSSVN+FFDQNHN
Sbjct: 1261 IEKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHN 1320
Query: 1321 LESFDTTAPMDPISVYKPQDSWISTAPEISDQI-RSCSSYVRNQGLDPSKRKIQNSRNGN 1380
L SFD T MDP V KP+D WISTAPEISD+I R CS +V+NQGLD SK+KI + N N
Sbjct: 1321 LASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMN 1380
Query: 1381 KSENQHEELIGEVLDLIDKPVLKDDFVTMAPMNFLPLMFDNEKDSSRKSKIQRRLSYEQS 1440
KSEN HEELI EV +LID PVLKD F TMAPMNFLP M +NE DSSRKSKIQRRLSY QS
Sbjct: 1381 KSENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQS 1440
Query: 1441 GNPFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHPDEGLIE 1500
+PFC+VD+ NNSSSD WSSINL Q S+GL+N FPDPSF+ +IMPLRYKD H DEGL +
Sbjct: 1441 DHPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQ 1500
Query: 1501 NSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRNRQQSVP 1560
N +R SKV FS SE SHSD TPLS+ALRSKHLQESSPWTMEFLNRIREKSRNRQ SVP
Sbjct: 1501 NHLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVP 1560
Query: 1561 SGSSSPFPEHLGNVKKTIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQKQSIQSSNS 1620
GSSSPFPE+LGNVKKT+KRRSPSILEFFKYQGGS LR KKPEQKR K S QSSNS
Sbjct: 1561 RGSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLR-----KKPEQKRHKPSTQSSNS 1620
Query: 1621 SKNELIPTSELSSWTPIDKRSRQTLSFAIDGNESQTKLVWSNDNYGLRKSSQKLGNK 1666
SKN L+ T ELSS TPIDKRSRQTLS+A DGN SQTKLVWSNDNYGL K+SQKLGNK
Sbjct: 1621 SKNVLVATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK 1665
BLAST of MS017781 vs. TAIR 10
Match:
AT5G52290.1 (shortage in chiasmata 1 )
HSP 1 Score: 849.4 bits (2193), Expect = 5.0e-246
Identity = 635/1729 (36.73%), Postives = 915/1729 (52.92%), Query Frame = 0
Query: 1 MRTRFLNIDYFAP------ENFSFLRLPLPHLASEPL--STVADLLQFDSVPEISLGIDS 60
MRTRFLNIDYF+ E FL LP P P+ + D L+F S+ +S+ I +
Sbjct: 1 MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGN 60
Query: 61 LTIDSALSKFFDDVLPRRIDDDNGNLDAGGRSSRLRDSRDRIFSSGSVETRCPEEEAKIT 120
L I++ALSKF DV+P R+ D R+F + +
Sbjct: 61 LPIEAALSKFLSDVVPDRVSVDY-----------------RVF-------EIDDSSLGVY 120
Query: 121 YEDNVEGGWKNFGSETSETEFMDNGADIKIRNLTYSMIQFETPQLDAFLENALLSEKEEV 180
Y D + G D T +I+ ETP+LD +EN LL E+
Sbjct: 121 YSDEKDDG------------------DAIADKATPKIIELETPELDFEMENKLLCTSED- 180
Query: 181 HILTVLPEVEFNLETL----NQGLLKYPFEVKESVYDIEGINSEYFFEQKSCLFEIG-FT 240
H+ +E + + + +L+ +++E +Y ++ I S+YF E + + E F
Sbjct: 181 HLQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFR 240
Query: 241 QDQKLLHQVTFPFLEVDEMVPETLVVLTFQDGLFFILENTDSPHRIQDGNLLVNNEEYLC 300
+ Q FP LEVDE+ L L+ D +F +LE + +L++N++E +
Sbjct: 241 KIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIG 300
Query: 301 SMKYDVEEFLS-DNFLSPCASSELASPGISGGSDLMSLMETLEIPASSVQTKSSGDLTVG 360
S YD+ + LS D +L+ S++ D S M+ + I S + G + V
Sbjct: 301 SKDYDLLDVLSTDCYLNKSGQSDVVP------EDEFSEMDIVTILEISNAEEFQGKVAV- 360
Query: 361 PAIFEEFQLLDIYSNNSFEVFFDLELSAVSEVHDCMSIEDANFKSFNELIVCHELALVDD 420
P +EEFQ+LD+ ++ F++F L+ + E+ M ++ NFK F+EL+V ELA DD
Sbjct: 361 PVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDD 420
Query: 421 TFKSLPVPILSNQGSERSVCAFIEDVLGNLNGQSLSASDGIYLDWHLLEENSCSSGIYSS 480
FKSLP PIL + RS+ EDVL + QSLSAS+ IYL W+LLEE + + Y
Sbjct: 421 AFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYP- 480
Query: 481 YQNMLEEINLKPIEFDQEPCENDNIFYRYVFSDDALVRERTEEKGECKESFFYGNSMFPS 540
EEI I+++ E E D Y ++FS+DA E +C E FYG S
Sbjct: 481 ----FEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVE---KCTEP-FYGISNLDE 540
Query: 541 QTIEVASSKLLNDRCQQKGRQDLAT-----KALSSWKSISESNDLSFFLNPQKPAGVGRG 600
S LL + Q+ G +D A KA +KS+S +DL+FF++P+K
Sbjct: 541 HAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNL 600
Query: 601 ESVFSAIDAN-----AMLPKASC-DGKLTNQPSTSTDDVSLTQWNVAVHQVCLSDNILHL 660
ES A ++ KASC G + P T + +H V S+NI L
Sbjct: 601 ESRVEAAKTTNHKCMSIDSKASCRSGGMHPNPKTE---------EMILHSVRPSENIQAL 660
Query: 661 INNCEKTYLAILQNETELRKTYLPCVAEDYFLMLSLPKQKLIDCIKKIYLQGASTYWEEK 720
+ K+YL ++++E+E ++ED +LS+ K KLIDCI+K + + ++K
Sbjct: 661 VGEFVKSYLTLVKDESE-------NLSEDKLKLLSISKGKLIDCIRKANVH-KTQLADDK 720
Query: 721 IMTLATLYAIKQIAWYLCFYGIHPAHLYLKKLCHSLECLKSRLGFLLSLIEDAGRMVDRE 780
T A L AIKQ+ WY+CF+GIH A++YL K+C S +K L L S +E + + +
Sbjct: 721 TFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETD 780
Query: 781 ITLSHPALTTTQDILCSSIPKDEHKTAASTLKVLVVANQIFWWSLKKMFGSMGLSFEELK 840
IT SHP+L Q IL S A K L++A ++FW SLK++ SMGLS+ +L
Sbjct: 781 ITRSHPSLAVIQGILQSEF-------ARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLN 840
Query: 841 YESPTDQRVS-NPDIMVDDL-VSNCLLVSQEHISGSFPFHKFSIILEYGGLNGSSQISTY 900
SP+ R + + I + L +S+CL++S E IS SFP FS+I+EYGG N S + S +
Sbjct: 841 SPSPSGNRPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYS-F 900
Query: 901 LSKLIDMPHPHFVTLELDNCGNCKAFCGGVDMPNELTIDENSLVENKTGMLEKLLNFLPF 960
SKL P HF+ +ELD C C GV +P L + + VE KTG LE++LNF+P
Sbjct: 901 PSKLDSFPSFHFIKVELDMPSACGQLCAGVTVPYSLKMIKGDEVETKTGWLEEVLNFVPL 960
Query: 961 EEMYILAPPEATIEPEDCAVPRRVPVVPLVDKSQHI--DLVSFPEAIVIVNTQKFEKDMI 1020
E++ E T E E ++P+ ++ + I +S ++++VNT+ +K+MI
Sbjct: 961 EKVCYAGSSETTNESEFISMPQE------SERKRGIIEQGLSDQRSVIVVNTKTVDKEMI 1020
Query: 1021 VSRRSSYQRILALEKEGVQVVERDLSLPVDLIITSSVCLMWYDCTNIHRK--ASTSNDAS 1080
+SRRS+YQ++LA+EKEGVQVVERD LPVDL+++ +VCL+WYD + +K A+ +S
Sbjct: 1021 ISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSS 1080
Query: 1081 SCLWIDNIATDVLTSVSFTFSGCVLVFEGEISSLSTVMESSDGLYAAAASLEIDFQLFCS 1140
S WI +IAT+VLTS+SF+FS C++VFEGE + L+ VM+SSD LYAAA SL I Q+FCS
Sbjct: 1081 SLSWIGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCS 1140
Query: 1141 YSSELTDEIILGCIENVSKLMTRGLYPKMSESETLAESFLTRFPSVNPLTAHGILSSESN 1200
S+ LTDEIIL CI++ KL L+ KM ESE+LAESFLT+FPSVNPLTA ILSS +
Sbjct: 1141 SSANLTDEIILKCIKSSVKLSK--LHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGS 1200
Query: 1201 LADFLEWSHECRLRAIKKYCIPDESVSLFSALCKYGEREDSKSAMTDCSSSVSSGPDSEK 1260
L +F++ H+ ++ +KY +P+ESV LFS++C+YG REDS+S MTD SSSVSSGPDS+
Sbjct: 1201 LLEFMKLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDT 1260
Query: 1261 CHFNVDSKNKRRNFTGGAQCIDKNMDFLNSDPLNPFAAVTVEPLAASKPFDSKMFEDPEI 1320
H +V S +K++ + ID + D ++ P FA ++ + DS +D EI
Sbjct: 1261 HHVSVHSGSKKKQYIAEKDEIDMD-DLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEI 1320
Query: 1321 FYDFKGLSSSVNHFFDQNHNLESFDTTAPMDPISVYKPQDSWISTAPEISDQIRSCSSYV 1380
F+ V F D AP P + P DSW S PE D+ S
Sbjct: 1321 FH-----FDPVTEFSD-----------APFKPSGISHPNDSWPSKDPERFDKKSGPGSSS 1380
Query: 1381 RNQGLD-----------------------PSKRKIQNSRNGNK--------------SEN 1440
++ + P K K + G K SEN
Sbjct: 1381 KDTFWEKDQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSEN 1440
Query: 1441 QHEELIGEVLDLIDKPVLKDDFVTMAPMN-FLPLMFD-NEKDSSRKSKIQRRLSYEQSGN 1500
+ GEV+D DK L++DF N F ++ D NE++ RKSK R+LS+ S
Sbjct: 1441 FIADYKGEVIDRADK-YLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQ 1500
Query: 1501 PFCSVDIANNSSSDIWSSINLQRQVSQGLNNHFPDPSFKTNIMPLRYKDGHP-------- 1560
P +SSS+ +++ D + N Y D +P
Sbjct: 1501 PNFPKAADIDSSSERYATEK--------------DSKYDNNTSLRGYADNYPAKRQRTLL 1560
Query: 1561 DEGLIENSVRGSKVLFSHSENPISHSDATPLSIALRSKHLQESSPWTMEFLNRIREKSRN 1620
+E L S + L E ISH +PLS A+RS + +SSPWT++FLNR+RE+SR
Sbjct: 1561 EEVLTRRSAVPTTELPFREE--ISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRA 1593
Query: 1621 R--QQSVPSGSSSPFPEHLGNVKK-TIKRRSPSILEFFKYQGGSALRKKPEWKKPEQKRQ 1649
R QQS+PS +S P E GN+KK KR+SPSILEFFKY+GG+ L+ E+KRQ
Sbjct: 1621 RKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKGGNKLQ--------EEKRQ 1593
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155768.1 | 0.0e+00 | 98.39 | protein SHORTAGE IN CHIASMATA 1 [Momordica charantia] | [more] |
XP_022971834.1 | 0.0e+00 | 77.16 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita maxima] | [more] |
XP_022971833.1 | 0.0e+00 | 77.07 | protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cucurbita maxima] | [more] |
XP_023554172.1 | 0.0e+00 | 77.12 | protein SHORTAGE IN CHIASMATA 1 isoform X4 [Cucurbita pepo subsp. pepo] | [more] |
XP_023554171.1 | 0.0e+00 | 77.07 | protein SHORTAGE IN CHIASMATA 1 isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
F4KG50 | 7.1e-245 | 36.73 | Protein SHORTAGE IN CHIASMATA 1 OS=Arabidopsis thaliana OX=3702 GN=SHOC1 PE=1 SV... | [more] |
B9F1C0 | 1.7e-142 | 29.08 | Protein SHORTAGE IN CHIASMATA 1 homolog OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DNT5 | 0.0e+00 | 98.39 | protein SHORTAGE IN CHIASMATA 1 OS=Momordica charantia OX=3673 GN=LOC111022805 P... | [more] |
A0A6J1I9N8 | 0.0e+00 | 77.16 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1I842 | 0.0e+00 | 77.07 | protein SHORTAGE IN CHIASMATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1I320 | 0.0e+00 | 76.89 | protein SHORTAGE IN CHIASMATA 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1GJU9 | 0.0e+00 | 76.57 | protein SHORTAGE IN CHIASMATA 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
Match Name | E-value | Identity | Description | |
AT5G52290.1 | 5.0e-246 | 36.73 | shortage in chiasmata 1 | [more] |