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MS017766 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGGCATTTCATATGGAGAACTCTTCCTCCTTCTTGGAGCTACTGCTGCCTTCATTGGTAATTACTGCACCACCTTTTCTCATTTGTTAAGTGATCTAAGAGATTTAATCCGTGAATAGAGTTATGACTCCCAGATTCTTATGAAAAGGGCCAAAGGATCTCCCAGTGATAGCAAGAATGGCAGGGAGGATGGCTGGAAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTCATGCAACAAACTCAAGCTCGCCAGGTGTGCTCTTATTTAGTTTAACCAACTATTAGTAAATTATTTGGTGATGTTTATGAAGGCTTCAGCAGTGTTTCTTTTGACTTCTCCTATGCGTAGGTAGTAGTCTTACTCGCCAATTTGTAGTTAATATATTTTCAAGGAAAAAGTTATCATGATTCCCATATGAAAATAAAAAAGTAGCATTGTATCTGGAAACAATCGTAAAAAGTAGCATTGTATCTGGAACCATATGCAATCGTAATTGGACAATCATTAAAGAGATGAACGCCCTTTAACATGATTCCCTGTTTGCAGGTTCACAAGGAATTGCAAGACACTATGGCTCAGCTTGATGCTATTCGTCATGAAATCCGAAGCATATCGATTCTGAATCCTGGGCCATTGACTCGGAGGCTTGTGGATGATCCCGAGCTCAGAACAGCTGATAGTGGCGTAACTAGTACGTGATAATGTATCATTACAGTTAAATTTTCGCAAGGGTTTCTAATTATTATAATGTTTTTTTCTTGTGTTTGGAATGCAGGTGATTTAGCAAAAGAAAAACATACTGTGGAGATCACACCAGCAGCTAGCAGTCTGAAGGTTCTTATTAATTTCTGAATATCATGATGGATCTCTTTTGCCACTGTAAATTTAAGCTACTTCAATGGGTCTGCACATTTCTTCAGGTAGCACCTTCACAAATATCAAATGAGCACAGCCGAGCAACTACATTCGCCAGATTGGCTGAATCACCAACCATAAAGAATGGTTCCACTGGCTCATTTCCAATTGCTACAGACGGAGATAAGCTTAATGATGAGTTAGGACTTCCTACAGTTTTACCCATATCCGCGGAAAATAGTGGGCTGTTACCTAAACGCCCGGGTAAGTTATCTAATTACAATAAAAGATAGTATAATAATTACCTTATTTTACAAATATATTCATTTCTGGTGTTAAAATCCTGACTTGAGAGTTTAGTGTACTTGGAAGTAACATCAATTGATGTGATGTTAGATGAGCTATATAGAAGGGTGGGGCACCTACCTGATAACTGCAGTTGCAACTATTTTGGAGATTTGCTCTCATTTGTCATTCAATTATTAATATTATACTAAACAGAATTGATGTCCGTTAGTCATGGGGAAACTTTTGTTTTGAAGACTTTGCAAATAGAGATGTATTCTGTCTATTGAAGATATTTACCAGTACTTTCAATGTTTTTCCCAGATGAGTTAAAAGGATCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAAGTGGCTCACAATGCAAAAGAATTTTTTTCTCAAATCACCAAAGCCAAATGAAACAAGAACAAGGA ATGCTGGGCATTTCATATGGAGAACTCTTCCTCCTTCTTGGAGCTACTGCTGCCTTCATTGGGCCAAAGGATCTCCCAGTGATAGCAAGAATGGCAGGGAGGATGGCTGGAAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTCATGCAACAAACTCAAGCTCGCCAGGTTCACAAGGAATTGCAAGACACTATGGCTCAGCTTGATGCTATTCGTCATGAAATCCGAAGCATATCGATTCTGAATCCTGGGCCATTGACTCGGAGGCTTGTGGATGATCCCGAGCTCAGAACAGCTGATAGTGGCGTAACTAGTGATTTAGCAAAAGAAAAACATACTGTGGAGATCACACCAGCAGCTAGCAGTCTGAAGGTAGCACCTTCACAAATATCAAATGAGCACAGCCGAGCAACTACATTCGCCAGATTGGCTGAATCACCAACCATAAAGAATGGTTCCACTGGCTCATTTCCAATTGCTACAGACGGAGATAAGCTTAATGATGAGTTAGGACTTCCTACAGTTTTACCCATATCCGCGGAAAATAGTGGGCTGTTACCTAAACGCCCGGATGAGTTAAAAGGATCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAAGTGGCTCACAATGCAAAAGAATTTTTTTCTCACCAAAGCCAAATGAAACAAGAACAAGGA ATGCTGGGCATTTCATATGGAGAACTCTTCCTCCTTCTTGGAGCTACTGCTGCCTTCATTGGGCCAAAGGATCTCCCAGTGATAGCAAGAATGGCAGGGAGGATGGCTGGAAGAGCAATTGGATATGTTCAGTTAGCTCGAGGTCAGTTTGACTCTGTCATGCAACAAACTCAAGCTCGCCAGGTTCACAAGGAATTGCAAGACACTATGGCTCAGCTTGATGCTATTCGTCATGAAATCCGAAGCATATCGATTCTGAATCCTGGGCCATTGACTCGGAGGCTTGTGGATGATCCCGAGCTCAGAACAGCTGATAGTGGCGTAACTAGTGATTTAGCAAAAGAAAAACATACTGTGGAGATCACACCAGCAGCTAGCAGTCTGAAGGTAGCACCTTCACAAATATCAAATGAGCACAGCCGAGCAACTACATTCGCCAGATTGGCTGAATCACCAACCATAAAGAATGGTTCCACTGGCTCATTTCCAATTGCTACAGACGGAGATAAGCTTAATGATGAGTTAGGACTTCCTACAGTTTTACCCATATCCGCGGAAAATAGTGGGCTGTTACCTAAACGCCCGGATGAGTTAAAAGGATCTGACATAATGTTAGAAGCAGTACTGGAAGCAGAAGTGGCTCACAATGCAAAAGAATTTTTTTCTCACCAAAGCCAAATGAAACAAGAACAAGGA MLGISYGELFLLLGATAAFIGPKDLPVIARMAGRMAGRAIGYVQLARGQFDSVMQQTQARQVHKELQDTMAQLDAIRHEIRSISILNPGPLTRRLVDDPELRTADSGVTSDLAKEKHTVEITPAASSLKVAPSQISNEHSRATTFARLAESPTIKNGSTGSFPIATDGDKLNDELGLPTVLPISAENSGLLPKRPDELKGSDIMLEAVLEAEVAHNAKEFFSHQSQMKQEQG Homology
BLAST of MS017766 vs. NCBI nr
Match: XP_022155834.1 (uncharacterized protein LOC111022860 isoform X1 [Momordica charantia] >XP_022155843.1 uncharacterized protein LOC111022860 isoform X1 [Momordica charantia]) HSP 1 Score: 419.1 bits (1076), Expect = 2.5e-113 Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of MS017766 vs. NCBI nr
Match: XP_022155851.1 (uncharacterized protein LOC111022860 isoform X2 [Momordica charantia]) HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96 Identity = 192/198 (96.97%), Postives = 194/198 (97.98%), Query Frame = 0
BLAST of MS017766 vs. NCBI nr
Match: XP_004152379.1 (uncharacterized protein LOC101219447 [Cucumis sativus] >XP_011654831.1 uncharacterized protein LOC101219447 [Cucumis sativus] >XP_031741819.1 uncharacterized protein LOC101219447 [Cucumis sativus] >KGN50299.1 hypothetical protein Csa_000431 [Cucumis sativus]) HSP 1 Score: 359.4 bits (921), Expect = 2.4e-95 Identity = 196/239 (82.01%), Postives = 214/239 (89.54%), Query Frame = 0
BLAST of MS017766 vs. NCBI nr
Match: XP_022922242.1 (uncharacterized protein LOC111430283 [Cucurbita moschata] >XP_022922243.1 uncharacterized protein LOC111430283 [Cucurbita moschata]) HSP 1 Score: 358.6 bits (919), Expect = 4.0e-95 Identity = 195/239 (81.59%), Postives = 215/239 (89.96%), Query Frame = 0
BLAST of MS017766 vs. NCBI nr
Match: XP_023551431.1 (uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo] >XP_023551433.1 uncharacterized protein LOC111809244 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 356.7 bits (914), Expect = 1.5e-94 Identity = 194/239 (81.17%), Postives = 213/239 (89.12%), Query Frame = 0
BLAST of MS017766 vs. ExPASy Swiss-Prot
Match: A4G9I1 (Sec-independent protein translocase protein TatB OS=Herminiimonas arsenicoxydans OX=204773 GN=tatB PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06 Identity = 25/74 (33.78%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of MS017766 vs. ExPASy Swiss-Prot
Match: Q0C0V9 (Sec-independent protein translocase protein TatB OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=tatB PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.6e-04 Identity = 23/66 (34.85%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of MS017766 vs. ExPASy TrEMBL
Match: A0A6J1DRF4 (uncharacterized protein LOC111022860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022860 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113 Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of MS017766 vs. ExPASy TrEMBL
Match: A0A6J1DSY9 (uncharacterized protein LOC111022860 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022860 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.0e-96 Identity = 192/198 (96.97%), Postives = 194/198 (97.98%), Query Frame = 0
BLAST of MS017766 vs. ExPASy TrEMBL
Match: A0A0A0KN15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166430 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95 Identity = 196/239 (82.01%), Postives = 214/239 (89.54%), Query Frame = 0
BLAST of MS017766 vs. ExPASy TrEMBL
Match: A0A6J1E2P5 (uncharacterized protein LOC111430283 OS=Cucurbita moschata OX=3662 GN=LOC111430283 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95 Identity = 195/239 (81.59%), Postives = 215/239 (89.96%), Query Frame = 0
BLAST of MS017766 vs. ExPASy TrEMBL
Match: A0A1S3ATI2 (sec-independent protein translocase protein TatB OS=Cucumis melo OX=3656 GN=LOC103482550 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.7e-94 Identity = 196/239 (82.01%), Postives = 211/239 (88.28%), Query Frame = 0
BLAST of MS017766 vs. TAIR 10
Match: AT5G43680.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 174.9 bits (442), Expect = 7.7e-44 Identity = 110/227 (48.46%), Postives = 145/227 (63.88%), Query Frame = 0
BLAST of MS017766 vs. TAIR 10
Match: AT5G43680.2 (unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 174.9 bits (442), Expect = 7.7e-44 Identity = 110/227 (48.46%), Postives = 145/227 (63.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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