![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS017765 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCACCAGTGAGATCTTACAGGAAAAATGCGATAATTGAAGCAGGGAAGAAGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGCTCCATACCTGAGGAAGATTGATCTCAAAGCTTTACCACAGCTATCAACAGCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGTAAGTTTCTATTATCAATTGCAATCTTTATAATATAATGTTGACCAAGATGTGATAATTTATGTTAAAATAGGATCAGAGGATGATTACAATTAATTCAAACATTATTTAAAATTATTTTAGTTTCTCTGTTACTAAATTGTAACATATTAATCTGATGGTATTTTGTAGGGAGATCTTCAGAGAGAGAAGGATACAGTGGGTGTGATTGTGTTCTAGCTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTTCATGGGAG CCACCAGTGAGATCTTACAGGAAAAATGCGATAATTGAAGCAGGGAAGAAGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGCTCCATACCTGAGGAAGATTGATCTCAAATACCACAGCTATCAACAGCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGTAAATCTTCAGAGAGAGAAGGATACAGTGGGTGTGATTGTGTTCTAGCTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTTCATGGGAG CCACCAGTGAGATCTTACAGGAAAAATGCGATAATTGAAGCAGGGAAGAAGAAGGAGATGAATAAGGAATCAGGGAGTGGAATTTATGTGAAAGTGAGCATGGATGGAGCTCCATACCTGAGGAAGATTGATCTCAAATACCACAGCTATCAACAGCTTTTGGATACCTTGGAAAACATGTTCAACTTCAAACATGGTAAATCTTCAGAGAGAGAAGGATACAGTGGGTGTGATTGTGTTCTAGCTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTTCATGGGAG PPVRSYRKNAIIEAGKKKEMNKESGSGIYVKVSMDGAPYLRKIDLKYHSYQQLLDTLENMFNFKHGKSSEREGYSGCDCVLAYEDKDGDWMLVGDVSWE Homology
BLAST of MS017765 vs. NCBI nr
Match: XP_038907066.1 (auxin-induced protein 22D-like [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 9.3e-33 Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of MS017765 vs. NCBI nr
Match: KAE8647912.1 (hypothetical protein Csa_000649 [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 74/105 (70.48%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of MS017765 vs. NCBI nr
Match: KAG7016865.1 (Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 77/103 (74.76%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of MS017765 vs. NCBI nr
Match: KAG6579385.1 (Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 77/103 (74.76%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of MS017765 vs. NCBI nr
Match: XP_008436982.2 (PREDICTED: auxin-induced protein 22D-like [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of MS017765 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.2e-28 Identity = 64/100 (64.00%), Postives = 70/100 (70.00%), Query Frame = 0
BLAST of MS017765 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2) HSP 1 Score: 122.5 bits (306), Expect = 2.7e-27 Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0
BLAST of MS017765 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 6.1e-27 Identity = 61/99 (61.62%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of MS017765 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.1e-26 Identity = 59/100 (59.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of MS017765 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.1e-26 Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of MS017765 vs. ExPASy TrEMBL
Match: E5GCU3 (Auxin-responsive protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of MS017765 vs. ExPASy TrEMBL
Match: A0A0A0KKT1 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G166440 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 74/105 (70.48%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of MS017765 vs. ExPASy TrEMBL
Match: A0A1S3ASK8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103482549 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of MS017765 vs. ExPASy TrEMBL
Match: A0A6J1IBP3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111471496 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.9e-30 Identity = 76/103 (73.79%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of MS017765 vs. ExPASy TrEMBL
Match: A0A6J1E2U9 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111430284 PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29 Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of MS017765 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 124.4 bits (311), Expect = 5.1e-29 Identity = 64/100 (64.00%), Postives = 70/100 (70.00%), Query Frame = 0
BLAST of MS017765 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 122.5 bits (306), Expect = 1.9e-28 Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0
BLAST of MS017765 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible ) HSP 1 Score: 111.3 bits (277), Expect = 4.5e-25 Identity = 62/100 (62.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of MS017765 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 ) HSP 1 Score: 107.5 bits (267), Expect = 6.4e-24 Identity = 59/100 (59.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of MS017765 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 ) HSP 1 Score: 97.1 bits (240), Expect = 8.7e-21 Identity = 59/117 (50.43%), Postives = 72/117 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|