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MS017759 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGGCGGGGTGGGCCCTACCTGCAGCGACATCAGCCTCCCGAGCGAACAGGAGACCCTCCACAAGGAGATCTGCGACCGAAAGTCCGGCGCCGTCGTCCATGGCGGCGCGCGGAGGAAGCCGGCGGCGGCGTTCCTGTCTTTCCGGCAGCTGAACGCGCTGGCGGTGGTGGTGATATTCTCGGCGAGCGGGATGGTGTGCGCGGAGGACTTGGCCTTCGTCCTCTTCTCCGTTGCTTACATGTACTTCATCTCGAGAGTGGCGTTCCCGGCGAGTGGCGGAGGGGAGGACGGAGGCGTGTTCAGCCCCGGCCAGAGCAAGGTGCTCCGGCTGTACGTGATGCTGGCGGCGGCGATCGGGCTGTTCCTTCCGATCGGGTACATTCTAGAAGGATTCTTCGAGGACGATAAAGAAGGGATTAAAGCCGCTTCTCCCCATGTTTTTCTTCTCGCCAGCCAGGTTTCTCATAAAACCAACATTTCATATTTTTAAACTATAAATAAAATCAAATTAAACCGTTTATTTCAGTAATATTTCATCCACTCGAAATTGGAACGAAATAAGTCGGAATGAAAATGTTATTTATTACTTTTATTTTAATAATCTATTCAATATAATGTCAAATCGATAATTTGCATATATCATTAGTTTTATAAAGTATTATTACTATTTTTAATTACAATGAATCCTATTTTAACAAATTTATAGTAAAATTAAACAAGTGATAATCATTGGTTTGTGGAATTATTAGTTTTTGGTTATTTAATTTTATTAGTCGATTTTAGAATTAATCAATTGTTTTTATTGCAAGACAGAAAACAATAACTGGCTTAAAATTGTGATGTATGATGGATTGGGACCAAGCTAAATATGATTTAGAGAGTATGGTTCAGATTTCATGGCTAGCTATCTATCTATCTTGTAATTAATTTCTTACGTTATTCTTTAGCAATTAATTAGTCCCAATTATGAAAACATAAATTTTAATTTCTCTCTCGTATATTCAATGAAGAAAGGTGTACAACAATTGGTATTAGTCCCATTGTTTCAATATATTTGATGTGCCATGGTATCCAAATCTATCTGCTGTGCATCAGCTAATTAATCTTTTATGGTTATTCTCACCAAGGTTTTCATGGAAGGCGTGGCAAACAACGACAGATTCTCGACGCCGATCCGCGTGTTCATACCGGTGTTCTACAACTCGAGGAGGATCTTCACCATAGCGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAAGAGTTCAGCGGGTCTGTGCGGCGGCTGCTGGTCGGAAGAGCGCTCGCGGTGGCGAACATGGCGCTTTGGAGCTTCAATCTCTTCGGGTTCTTGTTGCCTGTGTACCTCCCAAGAGCTCTCAACAGGTACTATAATTCTCTGCACAAGTCCAAAGAT ATGTCCGGCGGGGTGGGCCCTACCTGCAGCGACATCAGCCTCCCGAGCGAACAGGAGACCCTCCACAAGGAGATCTGCGACCGAAAGTCCGGCGCCGTCGTCCATGGCGGCGCGCGGAGGAAGCCGGCGGCGGCGTTCCTGTCTTTCCGGCAGCTGAACGCGCTGGCGGTGGTGGTGATATTCTCGGCGAGCGGGATGGTGTGCGCGGAGGACTTGGCCTTCGTCCTCTTCTCCGTTGCTTACATGTACTTCATCTCGAGAGTGGCGTTCCCGGCGAGTGGCGGAGGGGAGGACGGAGGCGTGTTCAGCCCCGGCCAGAGCAAGGTGCTCCGGCTGTACGTGATGCTGGCGGCGGCGATCGGGCTGTTCCTTCCGATCGGGTACATTCTAGAAGGATTCTTCGAGGACGATAAAGAAGGGATTAAAGCCGCTTCTCCCCATGTTTTTCTTCTCGCCAGCCAGGTTTTCATGGAAGGCGTGGCAAACAACGACAGATTCTCGACGCCGATCCGCGTGTTCATACCGGTGTTCTACAACTCGAGGAGGATCTTCACCATAGCGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAAGAGTTCAGCGGGTCTGTGCGGCGGCTGCTGGTCGGAAGAGCGCTCGCGGTGGCGAACATGGCGCTTTGGAGCTTCAATCTCTTCGGGTTCTTGTTGCCTGTGTACCTCCCAAGAGCTCTCAACAGGTACTATAATTCTCTGCACAAGTCCAAAGAT ATGTCCGGCGGGGTGGGCCCTACCTGCAGCGACATCAGCCTCCCGAGCGAACAGGAGACCCTCCACAAGGAGATCTGCGACCGAAAGTCCGGCGCCGTCGTCCATGGCGGCGCGCGGAGGAAGCCGGCGGCGGCGTTCCTGTCTTTCCGGCAGCTGAACGCGCTGGCGGTGGTGGTGATATTCTCGGCGAGCGGGATGGTGTGCGCGGAGGACTTGGCCTTCGTCCTCTTCTCCGTTGCTTACATGTACTTCATCTCGAGAGTGGCGTTCCCGGCGAGTGGCGGAGGGGAGGACGGAGGCGTGTTCAGCCCCGGCCAGAGCAAGGTGCTCCGGCTGTACGTGATGCTGGCGGCGGCGATCGGGCTGTTCCTTCCGATCGGGTACATTCTAGAAGGATTCTTCGAGGACGATAAAGAAGGGATTAAAGCCGCTTCTCCCCATGTTTTTCTTCTCGCCAGCCAGGTTTTCATGGAAGGCGTGGCAAACAACGACAGATTCTCGACGCCGATCCGCGTGTTCATACCGGTGTTCTACAACTCGAGGAGGATCTTCACCATAGCGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAAGAGTTCAGCGGGTCTGTGCGGCGGCTGCTGGTCGGAAGAGCGCTCGCGGTGGCGAACATGGCGCTTTGGAGCTTCAATCTCTTCGGGTTCTTGTTGCCTGTGTACCTCCCAAGAGCTCTCAACAGGTACTATAATTCTCTGCACAAGTCCAAAGAT MSGGVGPTCSDISLPSEQETLHKEICDRKSGAVVHGGARRKPAAAFLSFRQLNALAVVVIFSASGMVCAEDLAFVLFSVAYMYFISRVAFPASGGGEDGGVFSPGQSKVLRLYVMLAAAIGLFLPIGYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVANNDRFSTPIRVFIPVFYNSRRIFTIAEWLRDEFAKEDKEFSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPRALNRYYNSLHKSKD Homology
BLAST of MS017759 vs. NCBI nr
Match: XP_022156297.1 (uncharacterized protein LOC111023219 [Momordica charantia]) HSP 1 Score: 497.7 bits (1280), Expect = 6.0e-137 Identity = 250/251 (99.60%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of MS017759 vs. NCBI nr
Match: XP_008437515.1 (PREDICTED: uncharacterized protein LOC103482907 [Cucumis melo] >KAA0042605.1 uncharacterized protein E6C27_scaffold44G001010 [Cucumis melo var. makuwa] >TYK06008.1 uncharacterized protein E5676_scaffold376G001060 [Cucumis melo var. makuwa]) HSP 1 Score: 398.3 bits (1022), Expect = 5.0e-107 Identity = 204/251 (81.27%), Postives = 220/251 (87.65%), Query Frame = 0
BLAST of MS017759 vs. NCBI nr
Match: XP_038906981.1 (uncharacterized protein LOC120092829 [Benincasa hispida]) HSP 1 Score: 394.0 bits (1011), Expect = 9.4e-106 Identity = 204/255 (80.00%), Postives = 221/255 (86.67%), Query Frame = 0
BLAST of MS017759 vs. NCBI nr
Match: XP_004145897.1 (uncharacterized protein LOC101214743 [Cucumis sativus] >KGN49933.1 hypothetical protein Csa_000593 [Cucumis sativus]) HSP 1 Score: 387.9 bits (995), Expect = 6.7e-104 Identity = 196/251 (78.09%), Postives = 216/251 (86.06%), Query Frame = 0
BLAST of MS017759 vs. NCBI nr
Match: XP_023551347.1 (uncharacterized protein LOC111809194 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95 Identity = 187/260 (71.92%), Postives = 211/260 (81.15%), Query Frame = 0
BLAST of MS017759 vs. ExPASy TrEMBL
Match: A0A6J1DRN6 (uncharacterized protein LOC111023219 OS=Momordica charantia OX=3673 GN=LOC111023219 PE=4 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 2.9e-137 Identity = 250/251 (99.60%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of MS017759 vs. ExPASy TrEMBL
Match: A0A5D3C472 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001060 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.4e-107 Identity = 204/251 (81.27%), Postives = 220/251 (87.65%), Query Frame = 0
BLAST of MS017759 vs. ExPASy TrEMBL
Match: A0A1S3AUS6 (uncharacterized protein LOC103482907 OS=Cucumis melo OX=3656 GN=LOC103482907 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.4e-107 Identity = 204/251 (81.27%), Postives = 220/251 (87.65%), Query Frame = 0
BLAST of MS017759 vs. ExPASy TrEMBL
Match: A0A0A0KK26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141070 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 3.3e-104 Identity = 196/251 (78.09%), Postives = 216/251 (86.06%), Query Frame = 0
BLAST of MS017759 vs. ExPASy TrEMBL
Match: A0A6J1I7I0 (uncharacterized protein LOC111471524 OS=Cucurbita maxima OX=3661 GN=LOC111471524 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 7.3e-96 Identity = 187/261 (71.65%), Postives = 210/261 (80.46%), Query Frame = 0
BLAST of MS017759 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64 Identity = 118/245 (48.16%), Postives = 162/245 (66.12%), Query Frame = 0
BLAST of MS017759 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 152.5 bits (384), Expect = 4.4e-37 Identity = 79/200 (39.50%), Postives = 124/200 (62.00%), Query Frame = 0
BLAST of MS017759 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31 Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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