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MS017747 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGTTCTGTTTTCTGATATTCATTTTGCTTGATTTTGTGCAGAAAGTGATTCTGAAATTGGATGTTCATGATGAAAAATCTAAGCAAAAAGCTATGAGCACTGTCTCCAGCCTATCAGGTACTAAATTGAATCTCTCTCTCTCTCTCTCTTGTTTGGCTTCTGAGAAAACAGAGGAAATAAAAATTTTTGTCCAAATCCAAATTTCCTTTCCTTCTTGATTGGTTATTGAAAGAACCCATTATTTACAAGAGAAACAAAAGCAAACCCATGTCTTAAACTCTGTCATCTTCCCCGGTTTGGCTTCTGAGAAACCAGAGGAAACGAAAAAACATCATTTTTTTTTTTCTGTCCAACCCACACCAACTGAATTTTTTTTCCCCTTGTTGATTGAGGATTGAAAGAAGAACCCAGAATTGTACTAGAGGAACAAAAGGAAACCCATTTCTGAAAAGTAATTTTGTGTTGCAGGAGTGAACTCAATCTCGCTGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTGGATCCAGTGGGGCTGGTGAGAAAATTAAGGAAAACTTGCCACACAGTGATAGTTTCAGTTGGACCGGAGAAACCAGATCCACCTAAGAAAGAGGAACCAAAGAAGGAAGATCCAAAAAAGGCAGAGGAAAAGAAGAAAGAAGAACAACTTGCAGAGCTTGTAAAGGCTTTAAAGGCACAGCAGAATATGTACCCACCAATTTGCTATAGAAGCATTGAAGAAGACCCAAATGCCTGTGTTATTTGC GTGTTCTGTTTTCTGATATTCATTTTGCTTGATTTTGTGCAGAAAGTGATTCTGAAATTGGATGTTCATGATGAAAAATCTAAGCAAAAAGCTATGAGCACTGTCTCCAGCCTATCAGGAGTGAACTCAATCTCGCTGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTGGATCCAGTGGGGCTGGTGAGAAAATTAAGGAAAACTTGCCACACAGTGATAGTTTCAGTTGGACCGGAGAAACCAGATCCACCTAAGAAAGAGGAACCAAAGAAGGAAGATCCAAAAAAGGCAGAGGAAAAGAAGAAAGAAGAACAACTTGCAGAGCTTGTAAAGGCTTTAAAGGCACAGCAGAATATGTACCCACCAATTTGCTATAGAAGCATTGAAGAAGACCCAAATGCCTGTGTTATTTGC GTGTTCTGTTTTCTGATATTCATTTTGCTTGATTTTGTGCAGAAAGTGATTCTGAAATTGGATGTTCATGATGAAAAATCTAAGCAAAAAGCTATGAGCACTGTCTCCAGCCTATCAGGAGTGAACTCAATCTCGCTGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTGGATCCAGTGGGGCTGGTGAGAAAATTAAGGAAAACTTGCCACACAGTGATAGTTTCAGTTGGACCGGAGAAACCAGATCCACCTAAGAAAGAGGAACCAAAGAAGGAAGATCCAAAAAAGGCAGAGGAAAAGAAGAAAGAAGAACAACTTGCAGAGCTTGTAAAGGCTTTAAAGGCACAGCAGAATATGTACCCACCAATTTGCTATAGAAGCATTGAAGAAGACCCAAATGCCTGTGTTATTTGC VFCFLIFILLDFVQKVILKLDVHDEKSKQKAMSTVSSLSGVNSISLDMKEKKLTVTGDVDPVGLVRKLRKTCHTVIVSVGPEKPDPPKKEEPKKEDPKKAEEKKKEEQLAELVKALKAQQNMYPPICYRSIEEDPNACVIC Homology
BLAST of MS017747 vs. NCBI nr
Match: XP_022156754.1 (heavy metal-associated isoprenylated plant protein 39-like [Momordica charantia]) HSP 1 Score: 241.1 bits (614), Expect = 5.7e-60 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MS017747 vs. NCBI nr
Match: XP_022973069.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima]) HSP 1 Score: 172.9 bits (437), Expect = 1.9e-39 Identity = 103/139 (74.10%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of MS017747 vs. NCBI nr
Match: KAG6579369.1 (Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.7 bits (426), Expect = 3.6e-38 Identity = 101/139 (72.66%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of MS017747 vs. NCBI nr
Match: XP_022922258.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_023549811.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >KAG6579367.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.3 bits (425), Expect = 4.7e-38 Identity = 101/139 (72.66%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of MS017747 vs. NCBI nr
Match: XP_038906483.1 (heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida]) HSP 1 Score: 167.9 bits (424), Expect = 6.1e-38 Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 0
BLAST of MS017747 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21 Identity = 79/177 (44.63%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of MS017747 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.6e-18 Identity = 64/127 (50.39%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of MS017747 vs. ExPASy Swiss-Prot
Match: Q9LTE1 (Heavy metal-associated isoprenylated plant protein 14 OS=Arabidopsis thaliana OX=3702 GN=HIPP14 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.0e-11 Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of MS017747 vs. ExPASy Swiss-Prot
Match: Q9LTE2 (Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of MS017747 vs. ExPASy Swiss-Prot
Match: Q8GWS3 (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-08 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of MS017747 vs. ExPASy TrEMBL
Match: A0A6J1DUI0 (heavy metal-associated isoprenylated plant protein 39-like OS=Momordica charantia OX=3673 GN=LOC111023592 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.8e-60 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MS017747 vs. ExPASy TrEMBL
Match: A0A6J1IDG3 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111471567 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 9.2e-40 Identity = 103/139 (74.10%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of MS017747 vs. ExPASy TrEMBL
Match: A0A6J1E630 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111430294 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38 Identity = 101/139 (72.66%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of MS017747 vs. ExPASy TrEMBL
Match: A0A5D3C3P0 (FK506-binding protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00920 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37 Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 0
BLAST of MS017747 vs. ExPASy TrEMBL
Match: E5GBD2 (Metal ion binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37 Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 0
BLAST of MS017747 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23 Identity = 79/177 (44.63%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of MS017747 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23 Identity = 79/177 (44.63%), Postives = 100/177 (56.50%), Query Frame = 0
BLAST of MS017747 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 91.3 bits (225), Expect = 6.8e-19 Identity = 64/127 (50.39%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of MS017747 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13 Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of MS017747 vs. TAIR 10
Match: AT5G52760.1 (Copper transport protein family ) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12 Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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