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MS017743 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGGTTTATTTTTCTTCCTTCACTGGGAAATTACTTTTGTGTATGGCGTGCCTAGTTTAAGGAATGATCCAACAGGATAGGAGTGATACGAGCCATATTTTTGTCTTAATAACTTGACAAACGCATCTATATTTTATGGTTGGTAGCAATTACTATTTGATTGTAGTTTTTTATCTTGAATTTTCAAAAGTCGTACCTCATCGAAGAATGATGAGCTGCGTTCGGAGTTTGGTTTGACGTTATAGCTTTCTCTTTTTCCTTTTTTCCTTTTTTGGTACAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGGTTGGTTTAACCTTTCTCCCTCTACTCTCCTCTATATTTGCTGCTGTAGTTTAATGCATGTCTACTTGAATAGTTGAGTTAAATATCTTGATATATGACACAATCAACCCAGAACTAATGCATCGTCTGGAGCAAACTAGATATGAATATTTGAGATTTAATGAAACCAATATTTGTTCTGTGTGATTGTTATTAGTTTGTGTTCTCTGAACCTGTTGTGCTACATGGATAATTTAAGTTTTCATTTGAACCTTGTTAAATGTTCTTGGATTTTGTCTTGTTCTTATAAAGTTCAGTTTACTTGGTGATAATTAGTACTACGAAAGGACCTCCTCCTTTTTTGTTTCTTGTTTTTCCTTGAAGAATTAAAGTTGGACTTTTGGAAGAAGCCGTGTGACACTGCTGTTTTAATTGTCACTGCTTTTTAAAAACAATTAACCAGTGATGCAAAATGGAATCCTTGCCATGAACTATAGTAGTATAGTGTCGTATCGCTCGAGATTGATAAATTAGTCAACAGTTCAATTTTGGAGCATTGATGGATTATTTGCTTGTTTTCAGATTATTCTGGTTACCCATCCTAGAACCGGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGG ATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATTCTGGTTACCCATCCTAGAACCGGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGG ATGCAGTTCTTTGGTGGGTCAGAGATTAGCCCTTCGCCTCCGGCCCCGACAGCAACAGGAAACAATGTGCATATGATGTATATTTTCAATAGGAATGGAGTTTGCTTGTTCTACAGGGAGTGGAATCGGCCTCTCCGGACATTGAATCCCCAGCAAGACCACAAACTTATGTTTGGTTTGCTCTTCTCGCTCAGATCCTTTACTGCCAAGATGGACCCAACCAGTACTGATAAAGGCAATCTTGGGGTGCCTCAGTTACCTGGCCAAGGTTGTTCGTTTCACAGTTTTCGTACAAATACCTACAAGCTCAGTTTTACTGAAACTCCATCAGGGATAAAGATTATTCTGGTTACCCATCCTAGAACCGGTGATCTAAGAGACTCATTAAAGTACATCTACAACTTGTATGTTGAATATGTAGTGAAAAATCCACTCTACAGTCCAGGAACCCCAATCAGG MQFFGGSEISPSPPAPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLRSFTAKMDPTSTDKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPLYSPGTPIR Homology
BLAST of MS017743 vs. NCBI nr
Match: XP_022159770.1 (trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159771.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159772.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159773.1 trafficking protein particle complex subunit 1 [Momordica charantia] >XP_022159774.1 trafficking protein particle complex subunit 1 [Momordica charantia]) HSP 1 Score: 326.6 bits (836), Expect = 1.1e-85 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of MS017743 vs. NCBI nr
Match: KAA0042588.1 (trafficking protein particle complex subunit 1 [Cucumis melo var. makuwa] >TYK05991.1 trafficking protein particle complex subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 322.4 bits (825), Expect = 2.1e-84 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. NCBI nr
Match: XP_008437540.1 (PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo] >XP_008437541.1 PREDICTED: trafficking protein particle complex subunit 1 [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 2.1e-84 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. NCBI nr
Match: XP_038906999.1 (trafficking protein particle complex subunit 1 [Benincasa hispida] >XP_038907000.1 trafficking protein particle complex subunit 1 [Benincasa hispida]) HSP 1 Score: 322.0 bits (824), Expect = 2.8e-84 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. NCBI nr
Match: XP_004145907.1 (trafficking protein particle complex subunit 1 [Cucumis sativus] >XP_031741655.1 trafficking protein particle complex subunit 1 [Cucumis sativus] >KGN49914.1 hypothetical protein Csa_000153 [Cucumis sativus]) HSP 1 Score: 321.6 bits (823), Expect = 3.6e-84 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. ExPASy Swiss-Prot
Match: Q557G3 (Trafficking protein particle complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=trappc1-1 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26 Identity = 53/132 (40.15%), Postives = 84/132 (63.64%), Query Frame = 0
BLAST of MS017743 vs. ExPASy Swiss-Prot
Match: Q5NCF2 (Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trappc1 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25 Identity = 60/133 (45.11%), Postives = 86/133 (64.66%), Query Frame = 0
BLAST of MS017743 vs. ExPASy Swiss-Prot
Match: Q2KMM2 (Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25 Identity = 60/133 (45.11%), Postives = 86/133 (64.66%), Query Frame = 0
BLAST of MS017743 vs. ExPASy Swiss-Prot
Match: Q17QI1 (Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 6.7e-25 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0
BLAST of MS017743 vs. ExPASy Swiss-Prot
Match: Q9Y5R8 (Trafficking protein particle complex subunit 1 OS=Homo sapiens OX=9606 GN=TRAPPC1 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 6.7e-25 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 0
BLAST of MS017743 vs. ExPASy TrEMBL
Match: A0A6J1DZQ0 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111026095 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 5.4e-86 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of MS017743 vs. ExPASy TrEMBL
Match: A0A1S3AUA1 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103482924 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.0e-84 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. ExPASy TrEMBL
Match: A0A5D3C227 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00870 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.0e-84 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. ExPASy TrEMBL
Match: A0A0A0KM26 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_5G139910 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.7e-84 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. ExPASy TrEMBL
Match: A0A6J1IAE9 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111471566 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83 Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of MS017743 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein ) HSP 1 Score: 299.7 bits (766), Expect = 1.4e-81 Identity = 134/153 (87.58%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of MS017743 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein ) HSP 1 Score: 299.7 bits (766), Expect = 1.4e-81 Identity = 134/153 (87.58%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of MS017743 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 4.8e-10 Identity = 36/132 (27.27%), Postives = 60/132 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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