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MS017634 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTAGATTATAATGGAGGGTTAAATTGCGTCAAATGTGGGTTGAATACGGCGCATGTTTATTCATGGAACTCTGCTGCAAACTATGTCAGACTCAAGCGGCATGCCCTAATGATCTCTTCCCACGTCATTGTTTCTGGGAGTCTGTTGAAAAACAGGCAAGGGAATTTCTTCTATTTCATTCACTTTCTTGAGTTGCAGTGACTATAACCAACCAATTATTTGGCGTATGAAACTCTACGTATTCGTCAATTACGTTCTTTGACTCGTTTTTACGACCAGTTTTATACATTTTGGGGGTGCTAACATGATGGGGCAGTCTGGCAAACGTACATGAATTTTTCATTTGAATTGGTCATTGCGTTATTGCTATCGAAAGTTGATTGCGACAGCATTTCATTTATGTTGATCTTCTTCTCCCTTCTTTATTTGGCCCTGAAAAAATTTTAGAAGAGGAGTTGTGAAGGCTGCAACTATCGAAGAAATTGAAGCGGAGAAAACCTTGATTGAGAAAGATGTAGTAAGTTCCTATGATCATTGGTTTGGAGACTTGCCGTATCTTTGAATTAAGTAATCTAAGATTAGATAACTTTGTGCGACCAACTATCCAATTATTTTCCAGAGATCAAGGATGGAAAAGACTATCGACACGGTTCGGTCTAATTTCAACTCAATTAGGACCGGGAGAGCAAACCCTTCAATGCTCGATAAGATTGAGGTATGTGTAGATTCTTCAATCCAGCTTTTTTAGTCGAAAGTTGTTTCAATATGTCTACTTTGAATCTTTATTTTTTCCTTTCAAATATCAGATGAGTATTGTTCCAATAAGTTATTTCAATATGTCTACTATACAAAATTGTCTTCGTGGCTGTCCTAATTTTTGCTGAGCTGCCATTGCTTTATATGGAAAAGGAATAACATAGTATTTGTTCAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCCCAAATTAGTACACCTGATGCCAGCTCTCTCTTGGTCCAGCCATACGATAAATCTAGGTATAATGATGTGCCAGTTGGATTGAATGGTTGAACATATTTGGATCCCTTTGAGATATGTTGTTCACGCGATACGCCCTTTGCCTTACAGAAAACAGAAATTATAAGGATTAAGTTTTTCCAAATTCCAGTTTGTTATTTTACCATATTGGAAGGGTATAAAAGAAGGGGCAAGTTTTCTTCGATCACCATACCTTTACTGTGAAATTTTGAATATTGAGGTTCTCCCTTAATCCTTCATTCATTTGAAACTTGTAGATACTACTTTTCTGAACTAGAAACAACTTCAAGAAACTTGTACATAATATCTTTCTTTTCTTTTAGGAACCTACTTAGAACTTCAGAAATTTGTTATTTTAATTCTTGTTTTTCTGAATAAAAGGTTTCACATTGTTCTGGAGCTTTTAAATCTTCTCTGATCCCGAGTCTTTGACTTCATTGGTTGAGCTGCTGTGAACATAACCATCCTATTATTATCAGATGTAAAATGATGTCATCCAGCTGTACAGTGTAATGCATTTGTATATGTCTCTTGGAAATCAGCATTAACTCTTAACGAGTCATCATCTTCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAGGTCATACGGTTAACTCTCCCTCAACTTACATCCGAAAGAAGAAAGGTATTTTCC CTTTTAGATTATAATGGAGGGTTAAATTGCGTCAAATGTGGGTTGAATACGGCGCATGTTTATTCATGGAACTCTGCTGCAAACTATGTCAGACTCAAGCGGCATGCCCTAATGATCTCTTCCCACGTCATTGTTTCTGGGAGTCTGTTGAAAAACAGGCAAGGGAATTTCTTCTATTTCATTCACTTTCTTGAAAGAGGAGTTGTGAAGGCTGCAACTATCGAAGAAATTGAAGCGGAGAAAACCTTGATTGAGAAAGATGTAAGATCAAGGATGGAAAAGACTATCGACACGGTTCGGTCTAATTTCAACTCAATTAGGACCGGGAGAGCAAACCCTTCAATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCCCAAATTAGTACACCTGATGCCAGCTCTCTCTTGGTCCAGCCATACGATAAATCTAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAGGTCATACGGTTAACTCTCCCTCAACTTACATCCGAAAGAAGAAAGGTATTTTCC CTTTTAGATTATAATGGAGGGTTAAATTGCGTCAAATGTGGGTTGAATACGGCGCATGTTTATTCATGGAACTCTGCTGCAAACTATGTCAGACTCAAGCGGCATGCCCTAATGATCTCTTCCCACGTCATTGTTTCTGGGAGTCTGTTGAAAAACAGGCAAGGGAATTTCTTCTATTTCATTCACTTTCTTGAAAGAGGAGTTGTGAAGGCTGCAACTATCGAAGAAATTGAAGCGGAGAAAACCTTGATTGAGAAAGATGTAAGATCAAGGATGGAAAAGACTATCGACACGGTTCGGTCTAATTTCAACTCAATTAGGACCGGGAGAGCAAACCCTTCAATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCCCAAATTAGTACACCTGATGCCAGCTCTCTCTTGGTCCAGCCATACGATAAATCTAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAGGTCATACGGTTAACTCTCCCTCAACTTACATCCGAAAGAAGAAAGGTATTTTCC LLDYNGGLNCVKCGLNTAHVYSWNSAANYVRLKRHALMISSHVIVSGSLLKNRQGNFFYFIHFLERGVVKAATIEEIEAEKTLIEKDVRSRMEKTIDTVRSNFNSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKVFS Homology
BLAST of MS017634 vs. NCBI nr
Match: XP_022159166.1 (ribosome-recycling factor, chloroplastic isoform X1 [Momordica charantia] >XP_022159172.1 ribosome-recycling factor, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 334.0 bits (855), Expect = 8.9e-88 Identity = 178/193 (92.23%), Postives = 178/193 (92.23%), Query Frame = 0
BLAST of MS017634 vs. NCBI nr
Match: KAA0057317.1 (ribosome-recycling factor [Cucumis melo var. makuwa] >TYK13417.1 ribosome-recycling factor [Cucumis melo var. makuwa]) HSP 1 Score: 302.0 bits (772), Expect = 3.7e-78 Identity = 159/204 (77.94%), Postives = 177/204 (86.76%), Query Frame = 0
BLAST of MS017634 vs. NCBI nr
Match: XP_008449432.1 (PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76 Identity = 155/193 (80.31%), Postives = 171/193 (88.60%), Query Frame = 0
BLAST of MS017634 vs. NCBI nr
Match: XP_038888223.1 (ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 295.4 bits (755), Expect = 3.5e-76 Identity = 156/193 (80.83%), Postives = 169/193 (87.56%), Query Frame = 0
BLAST of MS017634 vs. NCBI nr
Match: XP_008449433.1 (PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 293.5 bits (750), Expect = 1.3e-75 Identity = 154/193 (79.79%), Postives = 170/193 (88.08%), Query Frame = 0
BLAST of MS017634 vs. ExPASy Swiss-Prot
Match: P82231 (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea OX=3562 GN=RRF PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.3e-52 Identity = 110/184 (59.78%), Postives = 139/184 (75.54%), Query Frame = 0
BLAST of MS017634 vs. ExPASy Swiss-Prot
Match: Q9M1X0 (Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RRF PE=2 SV=2) HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50 Identity = 102/129 (79.07%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of MS017634 vs. ExPASy Swiss-Prot
Match: P37706 (Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=RRF PE=2 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50 Identity = 107/171 (62.57%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of MS017634 vs. ExPASy Swiss-Prot
Match: A2YMU2 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26546 PE=1 SV=2) HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46 Identity = 91/126 (72.22%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of MS017634 vs. ExPASy Swiss-Prot
Match: A3BLC3 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0570700 PE=2 SV=2) HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46 Identity = 91/126 (72.22%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of MS017634 vs. ExPASy TrEMBL
Match: A0A6J1DZ32 (Ribosome-recycling factor, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025588 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.3e-88 Identity = 178/193 (92.23%), Postives = 178/193 (92.23%), Query Frame = 0
BLAST of MS017634 vs. ExPASy TrEMBL
Match: A0A5A7URP7 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00360 PE=3 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78 Identity = 159/204 (77.94%), Postives = 177/204 (86.76%), Query Frame = 0
BLAST of MS017634 vs. ExPASy TrEMBL
Match: A0A1S3BMN4 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76 Identity = 155/193 (80.31%), Postives = 171/193 (88.60%), Query Frame = 0
BLAST of MS017634 vs. ExPASy TrEMBL
Match: A0A1S3BMY6 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322 PE=3 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 6.4e-76 Identity = 154/193 (79.79%), Postives = 170/193 (88.08%), Query Frame = 0
BLAST of MS017634 vs. ExPASy TrEMBL
Match: A0A0A0KJG4 (Ribosome-recycling factor, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G410660 PE=3 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75 Identity = 155/193 (80.31%), Postives = 168/193 (87.05%), Query Frame = 0
BLAST of MS017634 vs. TAIR 10
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor ) HSP 1 Score: 201.1 bits (510), Expect = 8.3e-52 Identity = 102/129 (79.07%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of MS017634 vs. TAIR 10
Match: AT3G01800.1 (Ribosome recycling factor ) HSP 1 Score: 81.3 bits (199), Expect = 9.6e-16 Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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